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The map label for this gene is rsmI [H]

Identifier: 170754439

GI number: 170754439

Start: 92488

End: 93342

Strand: Direct

Name: rsmI [H]

Synonym: CLD_0724

Alternate gene names: 170754439

Gene position: 92488-93342 (Clockwise)

Preceding gene: 170756863

Following gene: 170755254

Centisome position: 2.34

GC content: 25.26

Gene sequence:

>855_bases
ATGCTTAATATAGAGGAAGGAAAATTATATGTAGTTCCTACTCCTATAGGGAATTTAAGAGATATAACAATAAGAGCATT
AGATGTACTAGAAGATGTTGATATTATAGCAGCAGAGGATACAAGGCAAACTTTAAAATTATTAAATCATTTTAATATAA
AAAAAACATTGATAAGTTATCATAAATTTAATGAAGAAGATAAAAGTATAAATATAATAAAGGATTTAAAAGAAGGAAAA
AATATAGCTTTAGTTTCTGATGCAGGTATGCCAGGAATATCAGATCCAGGTTATGTACTTATAAAAAAATGTATAGAAGA
GCAAATAATATTTGAAGTTTTACCTGGAGCTACAGCATTTACTACAGCCTTAGTTTATTCTGGAATGGATACTACAAAGT
TTATTTTTAAGGGGTTTATACCAAGAGAAAATAAAAATAGACAAAAGTTAATACAGGATATAAAGGATAGGATGGAAACA
TTAATTTTTTATGAATCTCCTCATAGATTAAAGGAATGTTTAAAATTTTTAAGAGATTCCTTAGGAAACAGAAATATATC
TATATGTAGAGAACTTACTAAGCTACATGAAGAAATTATAAGAGATAATTTAGAAGAGGTTATAAAATATTATGAACACC
AACAACCTAAAGGTGAATATGTTTTAGTTTTAGAAGGAAAATCTATAGAAGAAATAGAAAAGGAAAAGGAAATGGAATGG
TCTAATATAAATATACAGGATCATATAAAAAAGTATATAAGTGAAGGATATAGTAAAAAAGAATCTATAAAATTAGTAGC
TAAAGATAGAAAAATAACTAAGTCAGAAGTATATAAGTATTCTATAGATATATAA

Upstream 100 bases:

>100_bases
AAATGGGATAGGCCTTTATATATTTATGATGAAAATAATAAATATACAAATGAAGTTAAAAGAATTTATGGAATGGAATA
AATAAAAAGGAGAGTATTAT

Downstream 100 bases:

>100_bases
ATAATTTATTATATTTTTTAATAAAAATATAATAAATAACAAGTTAAATTAACATTTTTAAAAAAAATCCTCGTTAAAGT
TGAGTTCTTTACTGAAATGG

Product: tetrapyrrole methylase family protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MLNIEEGKLYVVPTPIGNLRDITIRALDVLEDVDIIAAEDTRQTLKLLNHFNIKKTLISYHKFNEEDKSINIIKDLKEGK
NIALVSDAGMPGISDPGYVLIKKCIEEQIIFEVLPGATAFTTALVYSGMDTTKFIFKGFIPRENKNRQKLIQDIKDRMET
LIFYESPHRLKECLKFLRDSLGNRNISICRELTKLHEEIIRDNLEEVIKYYEHQQPKGEYVLVLEGKSIEEIEKEKEMEW
SNINIQDHIKKYISEGYSKKESIKLVAKDRKITKSEVYKYSIDI

Sequences:

>Translated_284_residues
MLNIEEGKLYVVPTPIGNLRDITIRALDVLEDVDIIAAEDTRQTLKLLNHFNIKKTLISYHKFNEEDKSINIIKDLKEGK
NIALVSDAGMPGISDPGYVLIKKCIEEQIIFEVLPGATAFTTALVYSGMDTTKFIFKGFIPRENKNRQKLIQDIKDRMET
LIFYESPHRLKECLKFLRDSLGNRNISICRELTKLHEEIIRDNLEEVIKYYEHQQPKGEYVLVLEGKSIEEIEKEKEMEW
SNINIQDHIKKYISEGYSKKESIKLVAKDRKITKSEVYKYSIDI
>Mature_284_residues
MLNIEEGKLYVVPTPIGNLRDITIRALDVLEDVDIIAAEDTRQTLKLLNHFNIKKTLISYHKFNEEDKSINIIKDLKEGK
NIALVSDAGMPGISDPGYVLIKKCIEEQIIFEVLPGATAFTTALVYSGMDTTKFIFKGFIPRENKNRQKLIQDIKDRMET
LIFYESPHRLKECLKFLRDSLGNRNISICRELTKLHEEIIRDNLEEVIKYYEHQQPKGEYVLVLEGKSIEEIEKEKEMEW
SNINIQDHIKKYISEGYSKKESIKLVAKDRKITKSEVYKYSIDI

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=229, Percent_Identity=46.2882096069869, Blast_Score=201, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 33030; Mature: 33030

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIEEGKLYVVPTPIGNLRDITIRALDVLEDVDIIAAEDTRQTLKLLNHFNIKKTLISY
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHEECCHHHHHHHHHHHCCHHHHHHHH
HKFNEEDKSINIIKDLKEGKNIALVSDAGMPGISDPGYVLIKKCIEEQIIFEVLPGATAF
HHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH
TTALVYSGMDTTKFIFKGFIPRENKNRQKLIQDIKDRMETLIFYESPHRLKECLKFLRDS
HHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHH
LGNRNISICRELTKLHEEIIRDNLEEVIKYYEHQQPKGEYVLVLEGKSIEEIEKEKEMEW
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCC
SNINIQDHIKKYISEGYSKKESIKLVAKDRKITKSEVYKYSIDI
CCCCHHHHHHHHHHHCCCCHHHEEEEHHCCCCCHHHHEEEECCC
>Mature Secondary Structure
MLNIEEGKLYVVPTPIGNLRDITIRALDVLEDVDIIAAEDTRQTLKLLNHFNIKKTLISY
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHEECCHHHHHHHHHHHCCHHHHHHHH
HKFNEEDKSINIIKDLKEGKNIALVSDAGMPGISDPGYVLIKKCIEEQIIFEVLPGATAF
HHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH
TTALVYSGMDTTKFIFKGFIPRENKNRQKLIQDIKDRMETLIFYESPHRLKECLKFLRDS
HHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHH
LGNRNISICRELTKLHEEIIRDNLEEVIKYYEHQQPKGEYVLVLEGKSIEEIEKEKEMEW
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCC
SNINIQDHIKKYISEGYSKKESIKLVAKDRKITKSEVYKYSIDI
CCCCHHHHHHHHHHHCCCCHHHEEEEHHCCCCCHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]