| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is mnaA
Identifier: 170754429
GI number: 170754429
Start: 184242
End: 185399
Strand: Direct
Name: mnaA
Synonym: CLD_0637
Alternate gene names: 170754429
Gene position: 184242-185399 (Clockwise)
Preceding gene: 170754907
Following gene: 170757044
Centisome position: 4.65
GC content: 29.53
Gene sequence:
>1158_bases GTGGATAAGATAAAAACCATTACTATATTTGGAACTAGACCAGAAGCTATAAAAATGGCACCTTTAGTTAAAGAATTGGA AAAAAGAGAAGAAATAGAAAATAGAGTGTGTGTGACAGCACAACATAGAGAAATGTTAGATCAAGTTTTAGAATTATTTA ATATAAAACCAGATTTTGATCTTAATATAATGAAATCAAAACAAAGTCTTACAGGCATAACTACCAGAGTATTAGAAGGA TTAGAAGAAATTTTTGATAAAGAAAAACCTAATTTAATATTAGTTCATGGTGATACAACTACAACTTTTGCAGGAGCTTT AGCAGGTTTTTATAAGCAAATAAAAGTGGGGCATGTAGAAGCTGGATTAAGAACTTTTGATAAGTATTTTCCTTTCCCAG AGGAAATGAACAGAAAACTTACAGGAAGTATAGCAGATTTAAATTTTGCTCCTACTGTGGGATCTAAGAATAATTTACTA AGAGAGGCTATAGATGAAGAAAGTATATTTGTAACAGGAAATACAGTCATAGATGCTATGGAGTTTACTGTAGAACAAGA CTATATTTTCGAAAATGAAGATTTAAATATGATAGATTATGAAAATAAAAAGGTAATAATGGTTACTGCTCATAGAAGAG AAAATTGGGGTGAAGGTATAGAAAATATTTGTAATGCACTAAAAACTATAGTAGAAAAATACAAGGATGTGGAGATTGTA TATTTAGTTCATTTAAACCCAGTGGTAAGAGATACAGTTTATAGTATATTAGGAGATTTAGAAAGAGTACATTTATTAGA TCCATTAGATACAAAAGAAACGCATAATTTAATGAATAAATGTTATATGTTAATGACAGATTCAGGTGGACTCCAAGAAG AAGCACCTCATTTAGGTAAACCTGTTTTAGTATTAAGAGATGTAACAGAAAGACCAGAAGCTGTAAGAGTAGGAACAGTT AGGCTTGTGGGTACAGATAAGGAAGTTATAACTAAAGAGGTATTCGATTTAATAGAAAACAAACAAAAGTATGATATTAT GAGCAAAGCTATAAATCCATATGGGGATGGTAAAGCGTCAATTAGAATAGTGGATAGTATATTATATTATTTTGATAAGA TAGAAAAAAGACCACAAGAATTTCATGCTAATAAATAA
Upstream 100 bases:
>100_bases CAAAAGTCATATTTTTTACTTACAGCAATAATGCTAGCTCTTATATTAATAGCATGGAAATGTGGATTTTTTAGCCATAA AGAATAAGGAGGCAAGAAAA
Downstream 100 bases:
>100_bases TAAAATAAAATATGGATAAAATAAAGAGAAGTAACATAATTATATTATTTTTATGTTACTCTTTTTATAAAAATTATTGA AAGAATATAAATCTATTAAT
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MDKIKTITIFGTRPEAIKMAPLVKELEKREEIENRVCVTAQHREMLDQVLELFNIKPDFDLNIMKSKQSLTGITTRVLEG LEEIFDKEKPNLILVHGDTTTTFAGALAGFYKQIKVGHVEAGLRTFDKYFPFPEEMNRKLTGSIADLNFAPTVGSKNNLL REAIDEESIFVTGNTVIDAMEFTVEQDYIFENEDLNMIDYENKKVIMVTAHRRENWGEGIENICNALKTIVEKYKDVEIV YLVHLNPVVRDTVYSILGDLERVHLLDPLDTKETHNLMNKCYMLMTDSGGLQEEAPHLGKPVLVLRDVTERPEAVRVGTV RLVGTDKEVITKEVFDLIENKQKYDIMSKAINPYGDGKASIRIVDSILYYFDKIEKRPQEFHANK
Sequences:
>Translated_385_residues MDKIKTITIFGTRPEAIKMAPLVKELEKREEIENRVCVTAQHREMLDQVLELFNIKPDFDLNIMKSKQSLTGITTRVLEG LEEIFDKEKPNLILVHGDTTTTFAGALAGFYKQIKVGHVEAGLRTFDKYFPFPEEMNRKLTGSIADLNFAPTVGSKNNLL REAIDEESIFVTGNTVIDAMEFTVEQDYIFENEDLNMIDYENKKVIMVTAHRRENWGEGIENICNALKTIVEKYKDVEIV YLVHLNPVVRDTVYSILGDLERVHLLDPLDTKETHNLMNKCYMLMTDSGGLQEEAPHLGKPVLVLRDVTERPEAVRVGTV RLVGTDKEVITKEVFDLIENKQKYDIMSKAINPYGDGKASIRIVDSILYYFDKIEKRPQEFHANK >Mature_385_residues MDKIKTITIFGTRPEAIKMAPLVKELEKREEIENRVCVTAQHREMLDQVLELFNIKPDFDLNIMKSKQSLTGITTRVLEG LEEIFDKEKPNLILVHGDTTTTFAGALAGFYKQIKVGHVEAGLRTFDKYFPFPEEMNRKLTGSIADLNFAPTVGSKNNLL REAIDEESIFVTGNTVIDAMEFTVEQDYIFENEDLNMIDYENKKVIMVTAHRRENWGEGIENICNALKTIVEKYKDVEIV YLVHLNPVVRDTVYSILGDLERVHLLDPLDTKETHNLMNKCYMLMTDSGGLQEEAPHLGKPVLVLRDVTERPEAVRVGTV RLVGTDKEVITKEVFDLIENKQKYDIMSKAINPYGDGKASIRIVDSILYYFDKIEKRPQEFHANK
Specific function: Catalyzes The Reversible Epimerization At C-2 Of UDP-N- Acetylglucosamine (UDP-Glcnac) And Thereby Provides Bacteria With UDP-N-Acetylmannosamine (UDP-Mannac), The Activated Donor Of Mannac Residues. Also Involved In Bacteriophage N4 Adsorption. [C]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=372, Percent_Identity=56.1827956989247, Blast_Score=398, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 44076; Mature: 44076
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKIKTITIFGTRPEAIKMAPLVKELEKREEIENRVCVTAQHREMLDQVLELFNIKPDFD CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHCCCCCCC LNIMKSKQSLTGITTRVLEGLEEIFDKEKPNLILVHGDTTTTFAGALAGFYKQIKVGHVE CEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH AGLRTFDKYFPFPEEMNRKLTGSIADLNFAPTVGSKNNLLREAIDEESIFVTGNTVIDAM HHHHHHHHHCCCHHHHCHHHCCCEECCCCCCCCCCCHHHHHHHCCCCCEEEECCHHHHHH EFTVEQDYIFENEDLNMIDYENKKVIMVTAHRRENWGEGIENICNALKTIVEKYKDVEIV HHHCCCCEEEECCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEE YLVHLNPVVRDTVYSILGDLERVHLLDPLDTKETHNLMNKCYMLMTDSGGLQEEAPHLGK EEEECCHHHHHHHHHHHHCHHHEEECCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCC PVLVLRDVTERPEAVRVGTVRLVGTDKEVITKEVFDLIENKQKYDIMSKAINPYGDGKAS CEEEEECCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHH IRIVDSILYYFDKIEKRPQEFHANK HHHHHHHHHHHHHHHCCHHHHCCCC >Mature Secondary Structure MDKIKTITIFGTRPEAIKMAPLVKELEKREEIENRVCVTAQHREMLDQVLELFNIKPDFD CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHCCCCCCC LNIMKSKQSLTGITTRVLEGLEEIFDKEKPNLILVHGDTTTTFAGALAGFYKQIKVGHVE CEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH AGLRTFDKYFPFPEEMNRKLTGSIADLNFAPTVGSKNNLLREAIDEESIFVTGNTVIDAM HHHHHHHHHCCCHHHHCHHHCCCEECCCCCCCCCCCHHHHHHHCCCCCEEEECCHHHHHH EFTVEQDYIFENEDLNMIDYENKKVIMVTAHRRENWGEGIENICNALKTIVEKYKDVEIV HHHCCCCEEEECCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEE YLVHLNPVVRDTVYSILGDLERVHLLDPLDTKETHNLMNKCYMLMTDSGGLQEEAPHLGK EEEECCHHHHHHHHHHHHCHHHEEECCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCC PVLVLRDVTERPEAVRVGTVRLVGTDKEVITKEVFDLIENKQKYDIMSKAINPYGDGKAS CEEEEECCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHH IRIVDSILYYFDKIEKRPQEFHANK HHHHHHHHHHHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11466286; 7867955 [H]