| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is adhE [H]
Identifier: 170754358
GI number: 170754358
Start: 2254338
End: 2255831
Strand: Reverse
Name: adhE [H]
Synonym: CLD_2522
Alternate gene names: 170754358
Gene position: 2255831-2254338 (Counterclockwise)
Preceding gene: 170755626
Following gene: 170757740
Centisome position: 56.99
GC content: 33.47
Gene sequence:
>1494_bases ATGAATATTATAGATAATGATTTACTCTCCATGCAGGAAGCTAGAATTCTTGTTGAAAATGCCCGAGAGGCACAAAAAAA ACTAGCTACTTTTCCACAACAAAAACTTGATGAGATAGTTGAGCGTATGGCTGAAGAAGTTGAAAAACATTTAAAAGAGC TTGCGAAAATATCTAATGAAGAAACAGAGTATGGAAAGTGGCAAGATAAATATGTTAAAAATCACTTTGTATGTGAGTAT TTAAAAAACAAACTCAAAGGTATGAGGTGTGTAGGTATTATTAATGAAGATAAGATTAATAAAACTATGGATGTTGGTGT GCCAATGGGGGTTGTTATAGCCTTCCCACCAGCAACAAGTCCAGTATCTACCACTATATATAAAGCATTAATTGCAATAA AATCAGGAAATGCAATTATATTTTCACCTCATAAAAGAGCTAAAAATACAATTTCTAAAACAGTGGATATTTTAATTAGA GCTGCAGAAGGTGTAGGACTTCCAGAAGGTGCTCTTGCATATCTTCACACAGTAACTGAAAGTGGTTCATTAGAGCTTAT GAAGCATAAAGATACATCTTTAATAATGAACACTGGAGTTATAGAAATGCTTGATGAAGCCTATAGATCTGGTAAGCCAG TAATATATGGAGGCAATGGAAACGGACCTGCCTTTATAGAACGTACAGCTGATATAGAAAAAGCGGTTAAAGATATTATT ACAAGCAAGAATTTTGATTATGGAATTGTATCTGCCGCAGAACAATCAATTGTTGTAGATAGCTTAATTGCATCTGAAGT AAAGCAAGAACTTATTAAAAATGGTGGATATTTTATGACAGAAGAAGAAGCTTTAAAACTAGGAAAGGTCTTGTTTAACC AAGATGGAAGCCCAGATTTAGAGATGATTGGTAAGTCTCCACAGTTTTTAGCTAAAAAGGCTGGATTTGTAGTTTCAGAA GGTGTAAAAGTGCTTATTTCCAATGAGAAGTTTGTTTCTAAAAATAACCCTTATTCAAGAGAAAAACTTTGCCCGGTTTT AGCCTTTTATATAGAAGATGACTGGATGCACGCTTGTGAAAAATGTATAGAGTTATTACTTACTGAAAGATATGGACATA CACTTGTGATACATTCAAAGGATGAAGAAGTTATTCGTCAATTTGCACTTAAAAAACCCGTTGGGAGAGTACTTGTAAAT ACTGCAGGAACTTTTGGAAGCATGGGAGCAACTACAAATTTGTTTCCTTCAATGACATTAGGTAGTGGTTCTGCAGGTCA GGGAATGACTTCGGATAATGTTTCACCTATGAATCTATTATATATACGTAAAGTTGGATATGGAGTTCGCATGGTGGATG AAATTGTTAAAACAGTAAATGATAAAGAGGATTCTATCCCTGCAGTTTTAAATGGGAAGTTAAATGGAAATGAAATAGAT AACTATAAGTTATTAGAGAGTATTTTAAAAAAAGTTCTACAGGACTTAAAATAA
Upstream 100 bases:
>100_bases CCACACGAAGATCTTGAAAAAATAATAAAACGTTATGCCATTACAGATCTTATAACAGAATAGAAAAATGAATTTTTTCT AAAGAAAAGGAGAGAGAAAG
Downstream 100 bases:
>100_bases AAAATCATATTTAATATATGAAATACATTAAAGAATGTGAGGGAATAAATTGGATATACGTGAATTTTCAAATAAATTTA TGGAAGCTACTAAAAATATG
Product: aldehyde dehydrogenase family protein
Products: NA
Alternate protein names: Alcohol dehydrogenase; ADH; Acetaldehyde dehydrogenase [acetylating]; ACDH; Pyruvate-formate-lyase deactivase; PFL deactivase [H]
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MNIIDNDLLSMQEARILVENAREAQKKLATFPQQKLDEIVERMAEEVEKHLKELAKISNEETEYGKWQDKYVKNHFVCEY LKNKLKGMRCVGIINEDKINKTMDVGVPMGVVIAFPPATSPVSTTIYKALIAIKSGNAIIFSPHKRAKNTISKTVDILIR AAEGVGLPEGALAYLHTVTESGSLELMKHKDTSLIMNTGVIEMLDEAYRSGKPVIYGGNGNGPAFIERTADIEKAVKDII TSKNFDYGIVSAAEQSIVVDSLIASEVKQELIKNGGYFMTEEEALKLGKVLFNQDGSPDLEMIGKSPQFLAKKAGFVVSE GVKVLISNEKFVSKNNPYSREKLCPVLAFYIEDDWMHACEKCIELLLTERYGHTLVIHSKDEEVIRQFALKKPVGRVLVN TAGTFGSMGATTNLFPSMTLGSGSAGQGMTSDNVSPMNLLYIRKVGYGVRMVDEIVKTVNDKEDSIPAVLNGKLNGNEID NYKLLESILKKVLQDLK
Sequences:
>Translated_497_residues MNIIDNDLLSMQEARILVENAREAQKKLATFPQQKLDEIVERMAEEVEKHLKELAKISNEETEYGKWQDKYVKNHFVCEY LKNKLKGMRCVGIINEDKINKTMDVGVPMGVVIAFPPATSPVSTTIYKALIAIKSGNAIIFSPHKRAKNTISKTVDILIR AAEGVGLPEGALAYLHTVTESGSLELMKHKDTSLIMNTGVIEMLDEAYRSGKPVIYGGNGNGPAFIERTADIEKAVKDII TSKNFDYGIVSAAEQSIVVDSLIASEVKQELIKNGGYFMTEEEALKLGKVLFNQDGSPDLEMIGKSPQFLAKKAGFVVSE GVKVLISNEKFVSKNNPYSREKLCPVLAFYIEDDWMHACEKCIELLLTERYGHTLVIHSKDEEVIRQFALKKPVGRVLVN TAGTFGSMGATTNLFPSMTLGSGSAGQGMTSDNVSPMNLLYIRKVGYGVRMVDEIVKTVNDKEDSIPAVLNGKLNGNEID NYKLLESILKKVLQDLK >Mature_497_residues MNIIDNDLLSMQEARILVENAREAQKKLATFPQQKLDEIVERMAEEVEKHLKELAKISNEETEYGKWQDKYVKNHFVCEY LKNKLKGMRCVGIINEDKINKTMDVGVPMGVVIAFPPATSPVSTTIYKALIAIKSGNAIIFSPHKRAKNTISKTVDILIR AAEGVGLPEGALAYLHTVTESGSLELMKHKDTSLIMNTGVIEMLDEAYRSGKPVIYGGNGNGPAFIERTADIEKAVKDII TSKNFDYGIVSAAEQSIVVDSLIASEVKQELIKNGGYFMTEEEALKLGKVLFNQDGSPDLEMIGKSPQFLAKKAGFVVSE GVKVLISNEKFVSKNNPYSREKLCPVLAFYIEDDWMHACEKCIELLLTERYGHTLVIHSKDEEVIRQFALKKPVGRVLVN TAGTFGSMGATTNLFPSMTLGSGSAGQGMTSDNVSPMNLLYIRKVGYGVRMVDEIVKTVNDKEDSIPAVLNGKLNGNEID NYKLLESILKKVLQDLK
Specific function: This enzyme has three activities:ADH, ACDH, and PFL- deactivase. In aerobic conditions it acts as a hydrogen peroxide scavenger. The PFL deactivase activity catalyzes the quenching of the pyruvate-formate-lyase catalyst in an iron, NAD, and CoA dependent
COG id: COG1012
COG function: function code C; NAD-dependent aldehyde dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the iron- containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787493, Length=469, Percent_Identity=35.181236673774, Blast_Score=273, Evalue=1e-74, Organism=Escherichia coli, GI1788797, Length=355, Percent_Identity=27.887323943662, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI87081926, Length=317, Percent_Identity=22.397476340694, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR012079 [H]
Pfam domain/function: PF00171 Aldedh; PF00465 Fe-ADH [H]
EC number: =1.1.1.1; =1.2.1.10 [H]
Molecular weight: Translated: 54949; Mature: 54949
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIIDNDLLSMQEARILVENAREAQKKLATFPQQKLDEIVERMAEEVEKHLKELAKISNE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC ETEYGKWQDKYVKNHFVCEYLKNKLKGMRCVGIINEDKINKTMDVGVPMGVVIAFPPATS CCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHCCCHHCCCCCCEEEEECCCCCC PVSTTIYKALIAIKSGNAIIFSPHKRAKNTISKTVDILIRAAEGVGLPEGALAYLHTVTE CHHHHHHHHHHHEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC SGSLELMKHKDTSLIMNTGVIEMLDEAYRSGKPVIYGGNGNGPAFIERTADIEKAVKDII CCCEEEEECCCCEEEECCCHHHHHHHHHHCCCCEEECCCCCCCEEEEHHHHHHHHHHHHH TSKNFDYGIVSAAEQSIVVDSLIASEVKQELIKNGGYFMTEEEALKLGKVLFNQDGSPDL HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCH EMIGKSPQFLAKKAGFVVSEGVKVLISNEKFVSKNNPYSREKLCPVLAFYIEDDWMHACE HHCCCCHHHHHHHCCCCHHCCCEEEEECCCEECCCCCCCHHHHHHHHHHHHCHHHHHHHH KCIELLLTERYGHTLVIHSKDEEVIRQFALKKPVGRVLVNTAGTFGSMGATTNLFPSMTL HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCC GSGSAGQGMTSDNVSPMNLLYIRKVGYGVRMVDEIVKTVNDKEDSIPAVLNGKLNGNEID CCCCCCCCCCCCCCCCHHEEEEHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCC NYKLLESILKKVLQDLK CHHHHHHHHHHHHHHCC >Mature Secondary Structure MNIIDNDLLSMQEARILVENAREAQKKLATFPQQKLDEIVERMAEEVEKHLKELAKISNE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC ETEYGKWQDKYVKNHFVCEYLKNKLKGMRCVGIINEDKINKTMDVGVPMGVVIAFPPATS CCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHCCCHHCCCCCCEEEEECCCCCC PVSTTIYKALIAIKSGNAIIFSPHKRAKNTISKTVDILIRAAEGVGLPEGALAYLHTVTE CHHHHHHHHHHHEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC SGSLELMKHKDTSLIMNTGVIEMLDEAYRSGKPVIYGGNGNGPAFIERTADIEKAVKDII CCCEEEEECCCCEEEECCCHHHHHHHHHHCCCCEEECCCCCCCEEEEHHHHHHHHHHHHH TSKNFDYGIVSAAEQSIVVDSLIASEVKQELIKNGGYFMTEEEALKLGKVLFNQDGSPDL HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCH EMIGKSPQFLAKKAGFVVSEGVKVLISNEKFVSKNNPYSREKLCPVLAFYIEDDWMHACE HHCCCCHHHHHHHCCCCHHCCCEEEEECCCEECCCCCCCHHHHHHHHHHHHCHHHHHHHH KCIELLLTERYGHTLVIHSKDEEVIRQFALKKPVGRVLVNTAGTFGSMGATTNLFPSMTL HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCC GSGSAGQGMTSDNVSPMNLLYIRKVGYGVRMVDEIVKTVNDKEDSIPAVLNGKLNGNEID CCCCCCCCCCCCCCCCHHEEEEHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCC NYKLLESILKKVLQDLK CHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]