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The map label for this gene is 170754350

Identifier: 170754350

GI number: 170754350

Start: 3181532

End: 3182335

Strand: Reverse

Name: 170754350

Synonym: CLD_1611

Alternate gene names: NA

Gene position: 3182335-3181532 (Counterclockwise)

Preceding gene: 170756699

Following gene: 170754893

Centisome position: 80.4

GC content: 27.86

Gene sequence:

>804_bases
ATGTATTTAAGTGTTAAAAACATAGAAAATATAATGGAAGAATATGCTCCTTTATATTTAAAGGAAAATTACGATAATGT
AGGACTTATGGTAGGGGATTCAAAAACCATTGTAAATAAAATATTAGTTGCTTTAGATTGTACCTTAGATGTAATAGAAG
AGGCGAAGGAAAAGGAGTGTAATTTGATAGTTACTCATCACCCTTTATTATTTAAAAAACCTTCTTCTATAACTACAGAT
ACCTTATTGGGTAAAAAAATAATAGAATTAATAAAAAATGATATAAATTTATATTCTAGTCATACAAATCTAGACTCTAC
AGAAAAGGGCTTTAATCAAATAGTAGCAGAACTTTTGAAGTTACAAGATTTAAAAATATTAGATCCTAACGCTTATAATG
ATAATGCAGGTATAGGCAGAATAGGCTATTTAAAAGAAGAAGTTACTTTAGATAAATTATGTGAAATTGTAAAGGAAGTT
TTCAATATTCCTGCATTAAGATACTCAGGAGAAGACTCTTTAAAAATAAAAAAAGTAGCTATAATAAATGGCAGTGGCCA
AGATTATTTTAATAAAGCAAAAGCTTTAGGTGCAGATTGCGTAATAACAGGGGATACAACATACCATTATGTAAGTGATT
TAATGGAAGAAAAAATAGGAGTTATTGATGCAGGGCACTTTCATACAGAATGGCCAGCTTTACAATGCTTTTATAAATGG
CTAAAAAATAGAATAGAAGAAATGGGTTTTAAAAATGATGTTTTTTTATCTGAGAACAATTTTTCACCCTACAAGTATAA
ATAG

Upstream 100 bases:

>100_bases
ATAAAAAAATACTACAATATATAAGAGAAGACACAGAAAGTGCATCCTTAAGAAAAGCAGAAATAAAAGAAAAAATATTT
AAATTGGAGGAGCTGGTACA

Downstream 100 bases:

>100_bases
AAATGAGTTTAATGTACTCGTTTCTATTTTTTTATATATTCATAACATATCTATAACATAGATTTAAAATTTGACAGATA
TAATATAAAGAGGTATCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MYLSVKNIENIMEEYAPLYLKENYDNVGLMVGDSKTIVNKILVALDCTLDVIEEAKEKECNLIVTHHPLLFKKPSSITTD
TLLGKKIIELIKNDINLYSSHTNLDSTEKGFNQIVAELLKLQDLKILDPNAYNDNAGIGRIGYLKEEVTLDKLCEIVKEV
FNIPALRYSGEDSLKIKKVAIINGSGQDYFNKAKALGADCVITGDTTYHYVSDLMEEKIGVIDAGHFHTEWPALQCFYKW
LKNRIEEMGFKNDVFLSENNFSPYKYK

Sequences:

>Translated_267_residues
MYLSVKNIENIMEEYAPLYLKENYDNVGLMVGDSKTIVNKILVALDCTLDVIEEAKEKECNLIVTHHPLLFKKPSSITTD
TLLGKKIIELIKNDINLYSSHTNLDSTEKGFNQIVAELLKLQDLKILDPNAYNDNAGIGRIGYLKEEVTLDKLCEIVKEV
FNIPALRYSGEDSLKIKKVAIINGSGQDYFNKAKALGADCVITGDTTYHYVSDLMEEKIGVIDAGHFHTEWPALQCFYKW
LKNRIEEMGFKNDVFLSENNFSPYKYK
>Mature_267_residues
MYLSVKNIENIMEEYAPLYLKENYDNVGLMVGDSKTIVNKILVALDCTLDVIEEAKEKECNLIVTHHPLLFKKPSSITTD
TLLGKKIIELIKNDINLYSSHTNLDSTEKGFNQIVAELLKLQDLKILDPNAYNDNAGIGRIGYLKEEVTLDKLCEIVKEV
FNIPALRYSGEDSLKIKKVAIINGSGQDYFNKAKALGADCVITGDTTYHYVSDLMEEKIGVIDAGHFHTEWPALQCFYKW
LKNRIEEMGFKNDVFLSENNFSPYKYK

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI215272362, Length=130, Percent_Identity=30, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI209862879, Length=174, Percent_Identity=27.0114942528736, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI215272360, Length=173, Percent_Identity=27.1676300578035, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI56605983, Length=173, Percent_Identity=27.1676300578035, Blast_Score=72, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6321217, Length=258, Percent_Identity=29.0697674418605, Blast_Score=90, Evalue=3e-19,
Organism=Drosophila melanogaster, GI19921430, Length=256, Percent_Identity=29.6875, Blast_Score=100, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 30361; Mature: 30361

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLSVKNIENIMEEYAPLYLKENYDNVGLMVGDSKTIVNKILVALDCTLDVIEEAKEKEC
CEEEHHHHHHHHHHHCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC
NLIVTHHPLLFKKPSSITTDTLLGKKIIELIKNDINLYSSHTNLDSTEKGFNQIVAELLK
CEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LQDLKILDPNAYNDNAGIGRIGYLKEEVTLDKLCEIVKEVFNIPALRYSGEDSLKIKKVA
HCCCEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCCEEEEEEE
IINGSGQDYFNKAKALGADCVITGDTTYHYVSDLMEEKIGVIDAGHFHTEWPALQCFYKW
EEECCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHH
LKNRIEEMGFKNDVFLSENNFSPYKYK
HHHHHHHCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MYLSVKNIENIMEEYAPLYLKENYDNVGLMVGDSKTIVNKILVALDCTLDVIEEAKEKEC
CEEEHHHHHHHHHHHCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC
NLIVTHHPLLFKKPSSITTDTLLGKKIIELIKNDINLYSSHTNLDSTEKGFNQIVAELLK
CEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LQDLKILDPNAYNDNAGIGRIGYLKEEVTLDKLCEIVKEVFNIPALRYSGEDSLKIKKVA
HCCCEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCCEEEEEEE
IINGSGQDYFNKAKALGADCVITGDTTYHYVSDLMEEKIGVIDAGHFHTEWPALQCFYKW
EEECCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHH
LKNRIEEMGFKNDVFLSENNFSPYKYK
HHHHHHHCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]