Click here to switch to the map view.

The map label for this gene is yoaR [H]

Identifier: 170754284

GI number: 170754284

Start: 931929

End: 933491

Strand: Direct

Name: yoaR [H]

Synonym: CLD_3752

Alternate gene names: 170754284

Gene position: 931929-933491 (Clockwise)

Preceding gene: 170755309

Following gene: 170755235

Centisome position: 23.54

GC content: 31.22

Gene sequence:

>1563_bases
ATGGTAGAAAAAAGTAGTAAAAAATTTGACAAAAGGAAAATTATAATTAGCGTAATTATAACAGGTGTCATCTTATTAGG
AGTTATAGCTATATGTACAAGTTATATGCAAAGGTCTGTAAAAAAATATAGCACTTTATTTTATCCCGGAACCAGAATTG
AAAATGTAAATGTATCAGGAAAAACATTAGAAGAAGCTAAAAAGCTTTTAAAAGAGCAGTATGTAGACAAACTACCTTCT
AGAAAATTAGTAGTAAAGGCAGAAGGCAAGAGCTATCCATTTGAATTTTCTAAGTTAAATGTGAAGTACAATTTGGACAA
AGCATTGGATGAAGCTTTTAACTATGGAAAAAAACTAAATATTCTTAGTCAGTATAAAATCATAGTAGATCCAGATGATA
AATGTATCAGTACAGGATTTTCTTATGATAAAGAAGTGGTGAAAAAGTTTATAGATGATATAGCCAAGGATGTTAACAAA
AATCCAATTAATGCAGCTGTAAGCAGTACAGCTGAAAAAGTTAGCTTGGTTAAACATAGAGCTGGAAAGAAATTAGATAG
TGATAAACTTCAAAAAGACATAAACAATAGTATGAATGGGGATGCTAGTAAAGACGTTGAAGTCCAAGCTCCTATAGTAG
AAGTTAAACCTAAAGTAACTACAGATAAAATTTCATCTATAAATACTTTAATATCTACATTCCATACAGAGTATGGCGGT
ATATCTTCACCACAGAGAGCTAACAATATTGAAGTATGTGCTAAGAGTATAAATGGTACTGTATTAATGCCGGGAGAAAC
CTTTAGCTTTAATCAAGTAGTAGGAGAAAGAACAGAGCAAAGAGGGTATCAATCTGGGCCAGTCATAGTAGGAAATCAAG
TGGAATCAGGATTAGGTGGAGGAATTTGTCAGGTATCATCAACATTATATAATACTATTTTATTAAGCAACATAAAGTCT
ACGGAAAGAATGCATCATACGTTACCATCAAGTTATGTACCACTTGGAATGGATGCTACTGTAGATTGGGGAAATATAGA
TTATAAATTTAAGAATACTTTTTCATATCCTATTTATATTGAAGGAATTGCTGATGGAAGCAGCATAATATTTAATTTAT
ATTCTAATTCAGAATTGAAGAAAAGAACTTATTCTATTTGGAATGAAGTTTACAATACTATAAATGCTAATATGAAAACT
GAAGATGATCCTAATCTTCCAGAAGGAAAACAAGAGATTGTACAAAATGCATACACAGGATATAAAGTAAGAGTTTATAA
AAATATCTTAGAAAACGGCAAAGTAGTAGGTAAGGAGCTTGTTTCTGATGATTTTTATAGGCCAATAGAAGGATTAGCAA
AAGTAGGACCTAAAAAACCAGCGCCTAAACCAGAGGAACCAAAAAAAGATGATCCTAAACCAACTCCTAAACCAGAGGAT
CCGAAAAAAGATGATCCTAAAGCTAAGCCAAATGACACTAATGACAAAGATAAGGATAAAGAAAAAGATAAGGATAAGGA
TAAACCTACACAAGAAACTCCTAAAGAAGATACAAAAAAATAA

Upstream 100 bases:

>100_bases
AGTAAAGGTAAAATTATTTATGAGATAATACCGTTTTTCTTAATTTCTGTTTGTACGAAATCTAGGTAATTAATAAGTGT
AAGTTGAAGAGGTGATGCTT

Downstream 100 bases:

>100_bases
CACAATAAAAAAGTCTATAAATAGATAAGCATGTAGTGATAATAGCTATATGTTGTTATTGTAAAATTACTGTAGGATAT
TTTTGAACAAAAAATAAAAA

Product: vanW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MVEKSSKKFDKRKIIISVIITGVILLGVIAICTSYMQRSVKKYSTLFYPGTRIENVNVSGKTLEEAKKLLKEQYVDKLPS
RKLVVKAEGKSYPFEFSKLNVKYNLDKALDEAFNYGKKLNILSQYKIIVDPDDKCISTGFSYDKEVVKKFIDDIAKDVNK
NPINAAVSSTAEKVSLVKHRAGKKLDSDKLQKDINNSMNGDASKDVEVQAPIVEVKPKVTTDKISSINTLISTFHTEYGG
ISSPQRANNIEVCAKSINGTVLMPGETFSFNQVVGERTEQRGYQSGPVIVGNQVESGLGGGICQVSSTLYNTILLSNIKS
TERMHHTLPSSYVPLGMDATVDWGNIDYKFKNTFSYPIYIEGIADGSSIIFNLYSNSELKKRTYSIWNEVYNTINANMKT
EDDPNLPEGKQEIVQNAYTGYKVRVYKNILENGKVVGKELVSDDFYRPIEGLAKVGPKKPAPKPEEPKKDDPKPTPKPED
PKKDDPKAKPNDTNDKDKDKEKDKDKDKPTQETPKEDTKK

Sequences:

>Translated_520_residues
MVEKSSKKFDKRKIIISVIITGVILLGVIAICTSYMQRSVKKYSTLFYPGTRIENVNVSGKTLEEAKKLLKEQYVDKLPS
RKLVVKAEGKSYPFEFSKLNVKYNLDKALDEAFNYGKKLNILSQYKIIVDPDDKCISTGFSYDKEVVKKFIDDIAKDVNK
NPINAAVSSTAEKVSLVKHRAGKKLDSDKLQKDINNSMNGDASKDVEVQAPIVEVKPKVTTDKISSINTLISTFHTEYGG
ISSPQRANNIEVCAKSINGTVLMPGETFSFNQVVGERTEQRGYQSGPVIVGNQVESGLGGGICQVSSTLYNTILLSNIKS
TERMHHTLPSSYVPLGMDATVDWGNIDYKFKNTFSYPIYIEGIADGSSIIFNLYSNSELKKRTYSIWNEVYNTINANMKT
EDDPNLPEGKQEIVQNAYTGYKVRVYKNILENGKVVGKELVSDDFYRPIEGLAKVGPKKPAPKPEEPKKDDPKPTPKPED
PKKDDPKAKPNDTNDKDKDKEKDKDKDKPTQETPKEDTKK
>Mature_520_residues
MVEKSSKKFDKRKIIISVIITGVILLGVIAICTSYMQRSVKKYSTLFYPGTRIENVNVSGKTLEEAKKLLKEQYVDKLPS
RKLVVKAEGKSYPFEFSKLNVKYNLDKALDEAFNYGKKLNILSQYKIIVDPDDKCISTGFSYDKEVVKKFIDDIAKDVNK
NPINAAVSSTAEKVSLVKHRAGKKLDSDKLQKDINNSMNGDASKDVEVQAPIVEVKPKVTTDKISSINTLISTFHTEYGG
ISSPQRANNIEVCAKSINGTVLMPGETFSFNQVVGERTEQRGYQSGPVIVGNQVESGLGGGICQVSSTLYNTILLSNIKS
TERMHHTLPSSYVPLGMDATVDWGNIDYKFKNTFSYPIYIEGIADGSSIIFNLYSNSELKKRTYSIWNEVYNTINANMKT
EDDPNLPEGKQEIVQNAYTGYKVRVYKNILENGKVVGKELVSDDFYRPIEGLAKVGPKKPAPKPEEPKKDDPKPTPKPED
PKKDDPKAKPNDTNDKDKDKEKDKDKDKPTQETPKEDTKK

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 58146; Mature: 58146

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEKSSKKFDKRKIIISVIITGVILLGVIAICTSYMQRSVKKYSTLFYPGTRIENVNVSG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCC
KTLEEAKKLLKEQYVDKLPSRKLVVKAEGKSYPFEFSKLNVKYNLDKALDEAFNYGKKLN
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEEEECHHHHHHHHHCCCCCCC
ILSQYKIIVDPDDKCISTGFSYDKEVVKKFIDDIAKDVNKNPINAAVSSTAEKVSLVKHR
EEEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AGKKLDSDKLQKDINNSMNGDASKDVEVQAPIVEVKPKVTTDKISSINTLISTFHTEYGG
HCCCCCHHHHHHHHHCCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCC
ISSPQRANNIEVCAKSINGTVLMPGETFSFNQVVGERTEQRGYQSGPVIVGNQVESGLGG
CCCCCCCCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCC
GICQVSSTLYNTILLSNIKSTERMHHTLPSSYVPLGMDATVDWGNIDYKFKNTFSYPIYI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCCCCEEE
EGIADGSSIIFNLYSNSELKKRTYSIWNEVYNTINANMKTEDDPNLPEGKQEIVQNAYTG
EEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC
YKVRVYKNILENGKVVGKELVSDDFYRPIEGLAKVGPKKPAPKPEEPKKDDPKPTPKPED
EEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PKKDDPKAKPNDTNDKDKDKEKDKDKDKPTQETPKEDTKK
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHCCC
>Mature Secondary Structure
MVEKSSKKFDKRKIIISVIITGVILLGVIAICTSYMQRSVKKYSTLFYPGTRIENVNVSG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCC
KTLEEAKKLLKEQYVDKLPSRKLVVKAEGKSYPFEFSKLNVKYNLDKALDEAFNYGKKLN
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEEEECHHHHHHHHHCCCCCCC
ILSQYKIIVDPDDKCISTGFSYDKEVVKKFIDDIAKDVNKNPINAAVSSTAEKVSLVKHR
EEEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AGKKLDSDKLQKDINNSMNGDASKDVEVQAPIVEVKPKVTTDKISSINTLISTFHTEYGG
HCCCCCHHHHHHHHHCCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCC
ISSPQRANNIEVCAKSINGTVLMPGETFSFNQVVGERTEQRGYQSGPVIVGNQVESGLGG
CCCCCCCCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCC
GICQVSSTLYNTILLSNIKSTERMHHTLPSSYVPLGMDATVDWGNIDYKFKNTFSYPIYI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCCCCEEE
EGIADGSSIIFNLYSNSELKKRTYSIWNEVYNTINANMKTEDDPNLPEGKQEIVQNAYTG
EEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC
YKVRVYKNILENGKVVGKELVSDDFYRPIEGLAKVGPKKPAPKPEEPKKDDPKPTPKPED
EEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PKKDDPKAKPNDTNDKDKDKEKDKDKDKPTQETPKEDTKK
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]