| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754283
Identifier: 170754283
GI number: 170754283
Start: 544901
End: 545587
Strand: Direct
Name: 170754283
Synonym: CLD_0314
Alternate gene names: NA
Gene position: 544901-545587 (Clockwise)
Preceding gene: 170755559
Following gene: 170756885
Centisome position: 13.77
GC content: 27.51
Gene sequence:
>687_bases ATGATGCCAAAGCAAAAGGAGTTATGGATACCTAATGATGAGGTAGCAGAAAAAATAATATTAATACAAATAGAATGTTC TTTAAACGAAAACTATGAAAAATTAGAAAACAATACTATGTTTATTGAATCAATGAAAAGAAAAGATAATTCATCAGTAT TAGAAGTAGCACCTAAATTGAAAAATACTAATATATTAGGGTTATATGAAAGAATGTTACCACTTACTAAGGTGGATTTA ATGTATGCTTCAGTTTATTCTAAAACAGGTGGGGTACTTAATTTATTTAATGAAAAAATTTCTGAAAACATGGATATACA ATTTAAAGAATTAAGTAGTAAATCTAGAAATACAAATGAAGCTATAAAGAAATGGAAAGGTGAACCTTCAGAATTATGGA GCGGATTAACACCATCACAAATATGGGCTGGTGGAGGAAAGGTAGAAAAAGCTTTATTAATGGATTTTTTGAACAAGCTC ACGGAATTAATGAATGGAAAGCAGTTTACTACAAAAGGAGCAGCTTTTATGAATTGTATAGATGTATTAAGAACTTGGCA GCTTAATAAAAATGATATTTGTGAAGGTAAAACTCCTATGGAAGCTATAATAGAAGAAAGAAATCTTATATTGAAAGATA AGATAGATTTTATAAAAGAAAACAATATAGAATGTGACTTTATATAA
Upstream 100 bases:
>100_bases ATAAAGAAGGAGAAAAGCTGCTTAAAAGAAGTTTAAAATTAAACTCGCATTATAAGGAAGCAAATGATTTATTAGAAAAA TTAAGAGGTGAAAAATAGTC
Downstream 100 bases:
>100_bases TAACTTAATGTACATTATGACCTACTAATGGCTAATTACCAATGGTAGGTTTTAATTTTTTATTTATAGAAGATATATAT AAATAAAAAATTATTTAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MMPKQKELWIPNDEVAEKIILIQIECSLNENYEKLENNTMFIESMKRKDNSSVLEVAPKLKNTNILGLYERMLPLTKVDL MYASVYSKTGGVLNLFNEKISENMDIQFKELSSKSRNTNEAIKKWKGEPSELWSGLTPSQIWAGGGKVEKALLMDFLNKL TELMNGKQFTTKGAAFMNCIDVLRTWQLNKNDICEGKTPMEAIIEERNLILKDKIDFIKENNIECDFI
Sequences:
>Translated_228_residues MMPKQKELWIPNDEVAEKIILIQIECSLNENYEKLENNTMFIESMKRKDNSSVLEVAPKLKNTNILGLYERMLPLTKVDL MYASVYSKTGGVLNLFNEKISENMDIQFKELSSKSRNTNEAIKKWKGEPSELWSGLTPSQIWAGGGKVEKALLMDFLNKL TELMNGKQFTTKGAAFMNCIDVLRTWQLNKNDICEGKTPMEAIIEERNLILKDKIDFIKENNIECDFI >Mature_228_residues MMPKQKELWIPNDEVAEKIILIQIECSLNENYEKLENNTMFIESMKRKDNSSVLEVAPKLKNTNILGLYERMLPLTKVDL MYASVYSKTGGVLNLFNEKISENMDIQFKELSSKSRNTNEAIKKWKGEPSELWSGLTPSQIWAGGGKVEKALLMDFLNKL TELMNGKQFTTKGAAFMNCIDVLRTWQLNKNDICEGKTPMEAIIEERNLILKDKIDFIKENNIECDFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26240; Mature: 26240
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPKQKELWIPNDEVAEKIILIQIECSLNENYEKLENNTMFIESMKRKDNSSVLEVAPKL CCCCCCCCCCCCHHHCCEEEEEEEEECCCCCHHHHCCCHHHHHHHHCCCCCCHHHHHHHH KNTNILGLYERMLPLTKVDLMYASVYSKTGGVLNLFNEKISENMDIQFKELSSKSRNTNE CCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEHHHHHCCCCCHHH AIKKWKGEPSELWSGLTPSQIWAGGGKVEKALLMDFLNKLTELMNGKQFTTKGAAFMNCI HHHHHCCCHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH DVLRTWQLNKNDICEGKTPMEAIIEERNLILKDKIDFIKENNIECDFI HHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCEECCC >Mature Secondary Structure MMPKQKELWIPNDEVAEKIILIQIECSLNENYEKLENNTMFIESMKRKDNSSVLEVAPKL CCCCCCCCCCCCHHHCCEEEEEEEEECCCCCHHHHCCCHHHHHHHHCCCCCCHHHHHHHH KNTNILGLYERMLPLTKVDLMYASVYSKTGGVLNLFNEKISENMDIQFKELSSKSRNTNE CCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEHHHHHCCCCCHHH AIKKWKGEPSELWSGLTPSQIWAGGGKVEKALLMDFLNKLTELMNGKQFTTKGAAFMNCI HHHHHCCCHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH DVLRTWQLNKNDICEGKTPMEAIIEERNLILKDKIDFIKENNIECDFI HHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA