Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754274

Identifier: 170754274

GI number: 170754274

Start: 2038173

End: 2039246

Strand: Reverse

Name: 170754274

Synonym: CLD_2716

Alternate gene names: NA

Gene position: 2039246-2038173 (Counterclockwise)

Preceding gene: 170755940

Following gene: 170755288

Centisome position: 51.52

GC content: 24.95

Gene sequence:

>1074_bases
ATGTTTAAGAAAGGCTTTAAAAATATAGGATATTTTATAATAGTTTTTTTAGTTATTGGCTTAGTTGGGTGTAAAAGCCA
TAGAATATCAGAAGGAGAAAAGGTAGATATACCTAAATTTACAGAAGTAATAACTTTAAAAAGAGAAAAAGACTCTTTAG
GTATATATAATATTGAAAATGGGGATATAAGCAAAGCTATGGAAACCAAAGATATGGTAGATGTTAAATATAACAATAAA
AATAGCGCTTATGTTTTTATAAATATTATAGAAAAGGGTAAAGAGCTTAACAAAAATAAAATAACTATAATAAAAAATGG
GAAACAAACAATTTTAGATAATTTTTATTCTGCATCAGATATAGATATTTCAAAGGAAGGCAATAAAATAGCTTATAGAT
CCTTTAAACAAGATTCTCTACAAAGTGCAGAAGGCATGAAAATATATGATTTAGAAAATAAAAAGGAAATAAAAATTAAA
AGTGATGTATTAGTATCAGGAAGTCTTTTTAAATGGTTAAATGAAGATGAAATATTATATTATGGAATAAACTCCGAAAA
AGAAAATAAAGCTAAAATATATAAATATAATGTTAAAGAAAACAAAGAAGAGGTATATGTAGATAATATAGAGGGTATTT
GTACTTATTTTATGCCTAATGGAGATAATGTGCTTTTGCTAAGTAGGCAGGGGGATAAATTTAATCTTTCTTACTACAAT
AAAAAAGACAATAGCTTCAAAAAAATAAGTGAAGAAGTAAACCAAGTATATAAAGGTACAAAATCTACAAAAAACATGTA
TTTTCTAGGGAAAAATGATTTAGAAAACAAAGATTATTTATATAAAATTGATGGAAGTACATTGAACTTAACCAAGCTTA
CCTATGACTTTCCACCTAAAATAGATATAAATGGTGGTATTGCCTCAGATAAAAATGGTAATATATATTTTTCAGGTTAT
GAGGATTTAAAAGAACAGCCTTTAAATGAAATATATGTTTATAAAGAAAAAGATGATACAGTAGAGATAATATCTGATAA
AGAAAATTCTTACCATATAATGGGGGAAAGGTAA

Upstream 100 bases:

>100_bases
AATATTGCCAGGGGGCAAACTTTTCATAGAAATTAAAGAAAATAGTGTTTTTATGAAGGGCCCTGCGGATATTTGTTTTA
GAGGAGAAATAGATGTATAA

Downstream 100 bases:

>100_bases
TCTAAAGACAAATTAAATATAAGCTATAGATAATAAAAGCGTAAGGAATAAAAGCGCTGGTTATCTATAGCTTTTTATTT
TTTAATACTAATTCTATGGT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MFKKGFKNIGYFIIVFLVIGLVGCKSHRISEGEKVDIPKFTEVITLKREKDSLGIYNIENGDISKAMETKDMVDVKYNNK
NSAYVFINIIEKGKELNKNKITIIKNGKQTILDNFYSASDIDISKEGNKIAYRSFKQDSLQSAEGMKIYDLENKKEIKIK
SDVLVSGSLFKWLNEDEILYYGINSEKENKAKIYKYNVKENKEEVYVDNIEGICTYFMPNGDNVLLLSRQGDKFNLSYYN
KKDNSFKKISEEVNQVYKGTKSTKNMYFLGKNDLENKDYLYKIDGSTLNLTKLTYDFPPKIDINGGIASDKNGNIYFSGY
EDLKEQPLNEIYVYKEKDDTVEIISDKENSYHIMGER

Sequences:

>Translated_357_residues
MFKKGFKNIGYFIIVFLVIGLVGCKSHRISEGEKVDIPKFTEVITLKREKDSLGIYNIENGDISKAMETKDMVDVKYNNK
NSAYVFINIIEKGKELNKNKITIIKNGKQTILDNFYSASDIDISKEGNKIAYRSFKQDSLQSAEGMKIYDLENKKEIKIK
SDVLVSGSLFKWLNEDEILYYGINSEKENKAKIYKYNVKENKEEVYVDNIEGICTYFMPNGDNVLLLSRQGDKFNLSYYN
KKDNSFKKISEEVNQVYKGTKSTKNMYFLGKNDLENKDYLYKIDGSTLNLTKLTYDFPPKIDINGGIASDKNGNIYFSGY
EDLKEQPLNEIYVYKEKDDTVEIISDKENSYHIMGER
>Mature_357_residues
MFKKGFKNIGYFIIVFLVIGLVGCKSHRISEGEKVDIPKFTEVITLKREKDSLGIYNIENGDISKAMETKDMVDVKYNNK
NSAYVFINIIEKGKELNKNKITIIKNGKQTILDNFYSASDIDISKEGNKIAYRSFKQDSLQSAEGMKIYDLENKKEIKIK
SDVLVSGSLFKWLNEDEILYYGINSEKENKAKIYKYNVKENKEEVYVDNIEGICTYFMPNGDNVLLLSRQGDKFNLSYYN
KKDNSFKKISEEVNQVYKGTKSTKNMYFLGKNDLENKDYLYKIDGSTLNLTKLTYDFPPKIDINGGIASDKNGNIYFSGY
EDLKEQPLNEIYVYKEKDDTVEIISDKENSYHIMGER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41265; Mature: 41265

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKGFKNIGYFIIVFLVIGLVGCKSHRISEGEKVDIPKFTEVITLKREKDSLGIYNIEN
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCEEEECC
GDISKAMETKDMVDVKYNNKNSAYVFINIIEKGKELNKNKITIIKNGKQTILDNFYSASD
CCHHHHHCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEECCCHHHHHCCCCCCC
IDISKEGNKIAYRSFKQDSLQSAEGMKIYDLENKKEIKIKSDVLVSGSLFKWLNEDEILY
CEECCCCCEEEEECCCHHHHHCCCCCEEEECCCCCEEEEECCEEECCHHHHHCCCCCEEE
YGINSEKENKAKIYKYNVKENKEEVYVDNIEGICTYFMPNGDNVLLLSRQGDKFNLSYYN
EECCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCEEEEEEEC
KKDNSFKKISEEVNQVYKGTKSTKNMYFLGKNDLENKDYLYKIDGSTLNLTKLTYDFPPK
CCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEEEEECCCCC
IDINGGIASDKNGNIYFSGYEDLKEQPLNEIYVYKEKDDTVEIISDKENSYHIMGER
EEECCCCCCCCCCCEEECCCHHHHHCCCCCEEEEECCCCEEEEEECCCCCEEEEECC
>Mature Secondary Structure
MFKKGFKNIGYFIIVFLVIGLVGCKSHRISEGEKVDIPKFTEVITLKREKDSLGIYNIEN
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCEEEECC
GDISKAMETKDMVDVKYNNKNSAYVFINIIEKGKELNKNKITIIKNGKQTILDNFYSASD
CCHHHHHCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEECCCHHHHHCCCCCCC
IDISKEGNKIAYRSFKQDSLQSAEGMKIYDLENKKEIKIKSDVLVSGSLFKWLNEDEILY
CEECCCCCEEEEECCCHHHHHCCCCCEEEECCCCCEEEEECCEEECCHHHHHCCCCCEEE
YGINSEKENKAKIYKYNVKENKEEVYVDNIEGICTYFMPNGDNVLLLSRQGDKFNLSYYN
EECCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCEEEEEEEC
KKDNSFKKISEEVNQVYKGTKSTKNMYFLGKNDLENKDYLYKIDGSTLNLTKLTYDFPPK
CCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEEEEECCCCC
IDINGGIASDKNGNIYFSGYEDLKEQPLNEIYVYKEKDDTVEIISDKENSYHIMGER
EEECCCCCCCCCCCEEECCCHHHHHCCCCCEEEEECCCCEEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA