| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is surE
Identifier: 170754250
GI number: 170754250
Start: 280750
End: 281508
Strand: Direct
Name: surE
Synonym: CLD_0542
Alternate gene names: 170754250
Gene position: 280750-281508 (Clockwise)
Preceding gene: 170756581
Following gene: 170755344
Centisome position: 7.09
GC content: 29.25
Gene sequence:
>759_bases ATGAATATATTATTGACTAACGATGATGGAATAGAGGCAGAAGGAATAAACACCTTAGCTGAGCTATTAAGTAAATATCA TAATGTTACCATGGTAGCCCCTGAAAATCAAAGAAGTGCATCAAGTCATTCTATAACTATATATGAGCCCATAATAGTAA AACAGGTGAAAAAGCCTTATAATATAGAGGCATACAGTATAAGTGGTACTCCAGCAGATTGCGTAAGGGTAGCTTTAGAT AAATTAGTTCCAGATAATATAGATATGGTTATATCTGGAATAAACAAAGGACTTAATATAGGTAATGATATATTATATTC AGGAACAGTTTCTGCTGCTATAGAAGGAGCTATGTATAAGGTACCATCTATGGCTGTGTCTGCTCAATTTATAAAAAATA AAAAAGAAAACTATAAAATAGCCGCTAAATATGCACTGGGGATGCTAAATAGACTTAAAAAAGAAGATTTGAAAAATGAT GTAGTTTTAAATTTAAACATCCCTTTTTGCAGTGAAGAGGAAATAAAAGGGATAAAGGTATGCAAAGTAGGTAACAAAAT TTTTAATACTAGATTCTCAGAAGAAATAGATGAAGAGGGTAATAAAGTATTAAAATTAGAGGGAGATATAAATAAGGATA TTTATGAGGGGACAGATGTATATTATATAAGAAATAAATATGTAACCTTAACACCTCTACATTATGATTTAACTAATTTT AATATATTAGAAGAGACAGAACAATTATTTTTAAGTTAA
Upstream 100 bases:
>100_bases CAGAGAACATGTTCAATGGTAAAATTAATAAAAATATACTAATATTATAAATAGATAATTTCAAATATAAAAATAGAAAT TTATAAAATGGAGGCAAAAT
Downstream 100 bases:
>100_bases ATGAAAAATTATGAATTTTTAATAATGAATACTTAGCTATGGGTGAAGAATAATAACTAAATAGTGAAAAGCAATGAATT ATTGAAGAAAATTTAAGTAT
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MNILLTNDDGIEAEGINTLAELLSKYHNVTMVAPENQRSASSHSITIYEPIIVKQVKKPYNIEAYSISGTPADCVRVALD KLVPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAMYKVPSMAVSAQFIKNKKENYKIAAKYALGMLNRLKKEDLKND VVLNLNIPFCSEEEIKGIKVCKVGNKIFNTRFSEEIDEEGNKVLKLEGDINKDIYEGTDVYYIRNKYVTLTPLHYDLTNF NILEETEQLFLS
Sequences:
>Translated_252_residues MNILLTNDDGIEAEGINTLAELLSKYHNVTMVAPENQRSASSHSITIYEPIIVKQVKKPYNIEAYSISGTPADCVRVALD KLVPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAMYKVPSMAVSAQFIKNKKENYKIAAKYALGMLNRLKKEDLKND VVLNLNIPFCSEEEIKGIKVCKVGNKIFNTRFSEEIDEEGNKVLKLEGDINKDIYEGTDVYYIRNKYVTLTPLHYDLTNF NILEETEQLFLS >Mature_252_residues MNILLTNDDGIEAEGINTLAELLSKYHNVTMVAPENQRSASSHSITIYEPIIVKQVKKPYNIEAYSISGTPADCVRVALD KLVPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAMYKVPSMAVSAQFIKNKKENYKIAAKYALGMLNRLKKEDLKND VVLNLNIPFCSEEEIKGIKVCKVGNKIFNTRFSEEIDEEGNKVLKLEGDINKDIYEGTDVYYIRNKYVTLTPLHYDLTNF NILEETEQLFLS
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates [H]
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=242, Percent_Identity=37.603305785124, Blast_Score=161, Evalue=4e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 28210; Mature: 28210
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILLTNDDGIEAEGINTLAELLSKYHNVTMVAPENQRSASSHSITIYEPIIVKQVKKPY CEEEEECCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEECHHHHHHCCCCC NIEAYSISGTPADCVRVALDKLVPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAMYK CEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCHHHHHCCHHHC VPSMAVSAQFIKNKKENYKIAAKYALGMLNRLKKEDLKNDVVLNLNIPFCSEEEIKGIKV CCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCEEE CKVGNKIFNTRFSEEIDEEGNKVLKLEGDINKDIYEGTDVYYIRNKYVTLTPLHYDLTNF EECCCHHHHCHHHHHHHHCCCEEEEEECCCCCHHHCCCCEEEEECCEEEEEEEEECCCCC NILEETEQLFLS CHHHHHHHHHCC >Mature Secondary Structure MNILLTNDDGIEAEGINTLAELLSKYHNVTMVAPENQRSASSHSITIYEPIIVKQVKKPY CEEEEECCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEECHHHHHHCCCCC NIEAYSISGTPADCVRVALDKLVPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAMYK CEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCHHHHHCCHHHC VPSMAVSAQFIKNKKENYKIAAKYALGMLNRLKKEDLKNDVVLNLNIPFCSEEEIKGIKV CCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCEEE CKVGNKIFNTRFSEEIDEEGNKVLKLEGDINKDIYEGTDVYYIRNKYVTLTPLHYDLTNF EECCCHHHHCHHHHHHHHCCCEEEEEECCCCCHHHCCCCEEEEECCEEEEEEEEECCCCC NILEETEQLFLS CHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA