| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754238
Identifier: 170754238
GI number: 170754238
Start: 1406353
End: 1406718
Strand: Direct
Name: 170754238
Synonym: CLD_3293
Alternate gene names: NA
Gene position: 1406353-1406718 (Clockwise)
Preceding gene: 170757283
Following gene: 170755468
Centisome position: 35.53
GC content: 27.05
Gene sequence:
>366_bases ATGAGAAGATTTTTAGTAAGAATAATTCCAATAGTAACCTTAAGTCTTTTTCTTGCCGTTATGTTAAGTGCAAGTTATAT GAAAAAACCTAGGAATCAAGAGGAAAATGTAGATAAATTTATAAGCAGTACAATAGAATATGTAAAGAATGAAGAGTGGG GTAATGCAGAAAAGGAAATAGAAAAATTAGATTTAGCATGGAATAAGATTTTAAAAAGAGTTCAATTTAGCTCGGAATTA GACCAAATAAATTATTTAAGTGAAAGTATAAATAAAGCTAAAGGTGGGATAATTGCAGAAGACAAAGGTATAAGTTTATC TAACTTAATAAGCTTTTATGAGGAATGGAAAATTATAGGTAAATAA
Upstream 100 bases:
>100_bases TCTAAATATTAATTTTAATTAAGTAATAAAAGTATTAAAAAATATAAATTAAGATGTTATTAAAGTTATATTTACGAAAT AAATTTTAAAGGGTGATTAT
Downstream 100 bases:
>100_bases AAATAGAATATATTTAAAATTATAAATTTTTATTAAGTGAAGTAAAAAACAAATTATTTATGTAATAGCATATAGGTGAA TAAAAAATAATACTAAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MRRFLVRIIPIVTLSLFLAVMLSASYMKKPRNQEENVDKFISSTIEYVKNEEWGNAEKEIEKLDLAWNKILKRVQFSSEL DQINYLSESINKAKGGIIAEDKGISLSNLISFYEEWKIIGK
Sequences:
>Translated_121_residues MRRFLVRIIPIVTLSLFLAVMLSASYMKKPRNQEENVDKFISSTIEYVKNEEWGNAEKEIEKLDLAWNKILKRVQFSSEL DQINYLSESINKAKGGIIAEDKGISLSNLISFYEEWKIIGK >Mature_121_residues MRRFLVRIIPIVTLSLFLAVMLSASYMKKPRNQEENVDKFISSTIEYVKNEEWGNAEKEIEKLDLAWNKILKRVQFSSEL DQINYLSESINKAKGGIIAEDKGISLSNLISFYEEWKIIGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14045; Mature: 14045
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS00268 CECROPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFLVRIIPIVTLSLFLAVMLSASYMKKPRNQEENVDKFISSTIEYVKNEEWGNAEKEI CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH EKLDLAWNKILKRVQFSSELDQINYLSESINKAKGGIIAEDKGISLSNLISFYEEWKIIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCC K C >Mature Secondary Structure MRRFLVRIIPIVTLSLFLAVMLSASYMKKPRNQEENVDKFISSTIEYVKNEEWGNAEKEI CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH EKLDLAWNKILKRVQFSSELDQINYLSESINKAKGGIIAEDKGISLSNLISFYEEWKIIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA