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The map label for this gene is xp55 [H]

Identifier: 170754233

GI number: 170754233

Start: 1518927

End: 1520516

Strand: Direct

Name: xp55 [H]

Synonym: CLD_3182

Alternate gene names: 170754233

Gene position: 1518927-1520516 (Clockwise)

Preceding gene: 170757350

Following gene: 170755795

Centisome position: 38.37

GC content: 30.94

Gene sequence:

>1590_bases
ATGAAAAAAATGAAATCAATTAAAAAAGCTACGGCTATGTTGTTAATTGCTTTATTTACATTGCCAATGATATTTACTGG
TTGCTCAAGCAAAAAAGAACAATCAGAAAAAGATGATAAAAAAGGCAAGACAGTAGTTTATGGTGCAGAATTTGAAGATG
AAAAATTAAATCCTGTATTAGCGCCTGCCTATGCTAATGATTTAATTTTTAGAGGCCTTATGAGATTTGATAAAGATAAT
AAGCCGCAATGTGATATTGCAGAATCTTATAAGAAATCCACAGATGGACTAACCTATGATTTCAAAATTAAAAAAGGTGT
AAAATTCCATGATGGAAAAGAACTTAAAGCGGAGGATGTTGTATTTACGATAAAGTCAATACAAGATCCTAAGGTCAATA
CAGAAATGAAACCAGAATTTGAAGAAGTAAAGGATATAAAAGCCGAAGGGGATTATAATGTTAAAGTCACATTAGCTAAG
CCTTTTCCAGCACTTTTAGACAAGTTAACAATTGGAATAGTTCCAAAGCATGCTCTAGAAGGAAAAGATTTAAATAATGC
AGAGTTTAATCAAAAGCCAATAGGTGCAGGACCATTTAAATTTGTAAAATGGGAAAAAGGTAACAATATAACGTTATCAA
AATTTGAAGACTATTATGGTAAAGACAAAACAGGAAATGTAGAAAAGTTTATATTTAAATTTATACCAGACTATAATGTA
CGTGCTATGCAACTTGAAACAGGAGAGATTGATTTAGCTTATGTAGAACCAAGTCAAGTAGCTAAACTAGAAAAATTAGA
AAAAATGCAAATATATAATGAAAATACAGCAGACTATAGATGCTTTATGTTTAATATGAGAAAAGAATTATGGAAGGATG
TCAATGTTCGTAAAGCATTTAACTATGCAGTAGATAGAAAAGGTATGGTAGATGGAATATTAAAAGGTTTTGGAGTAGAA
GCCTATTCTCCACTTCAAAAGAATAAATTTAATAATGCTAATGTAGAAAAGTATTCTTATAATTTAGAAAAAGCTAATGA
ATTGTTGGATAAAGCAGGTTGGAAAAAAGGACAAGATGGTATACGAGAAAAGAATGGAAAGAAATTTGAATTTACTTTAA
CTGCGCCAAGTACTGATGAAGTTAGAGTAAAAATAGCTAATTACTTAGCTTCTCAATTTAAGAAAATAGGAGTTACTGTT
AAAGTTGCAGCACTAGATTGGAATGCTATAAAAATAGATGAATGTGAAGCTTTTGTGTTAGGCTGGGGCAGCCCATATGA
TGCAGATGATCATACATATAAATTATTCCATTCAAGCCAAATAAAGAATGGTAACAATTTTGGAGCTTATTCAAATCCTA
AAGTAGATAAATTACTAGAAGAGGGAAGAACGACAGAAGATGAAGGAAAGAGAAAAGAAATATATGGTAAACTTCAAGAA
GAATTAGCTAATGATCCACCATATAATTTTGAAATCTATGTAAACGCTATATATGCTGTAAACAAAAAGGTTACAGGAAT
AAAGGAAAAGATATTAGGACACCACGGAGCTGGATTCATATGGAATGCAGAGGAGTGGAAGGTTCAATGA

Upstream 100 bases:

>100_bases
AAAATTTAACAGAATTTGATACTTTAAACATTGGCATGGGTTTTGCTTATTAATATATATGTGCATAAAATATATTAATT
TTAGGAGAAAGGAAGGCAAC

Downstream 100 bases:

>100_bases
CCTTAAGATATATACTAAAGAGATTAGGACAAGGTATATTGATTATATTTTTTCTAAGTATAATATCCTTTCTTATCATA
AATGCTGCGCCGGGAGATCC

Product: peptide/opine/nickel uptake ABC transporter substrate-binding protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MKKMKSIKKATAMLLIALFTLPMIFTGCSSKKEQSEKDDKKGKTVVYGAEFEDEKLNPVLAPAYANDLIFRGLMRFDKDN
KPQCDIAESYKKSTDGLTYDFKIKKGVKFHDGKELKAEDVVFTIKSIQDPKVNTEMKPEFEEVKDIKAEGDYNVKVTLAK
PFPALLDKLTIGIVPKHALEGKDLNNAEFNQKPIGAGPFKFVKWEKGNNITLSKFEDYYGKDKTGNVEKFIFKFIPDYNV
RAMQLETGEIDLAYVEPSQVAKLEKLEKMQIYNENTADYRCFMFNMRKELWKDVNVRKAFNYAVDRKGMVDGILKGFGVE
AYSPLQKNKFNNANVEKYSYNLEKANELLDKAGWKKGQDGIREKNGKKFEFTLTAPSTDEVRVKIANYLASQFKKIGVTV
KVAALDWNAIKIDECEAFVLGWGSPYDADDHTYKLFHSSQIKNGNNFGAYSNPKVDKLLEEGRTTEDEGKRKEIYGKLQE
ELANDPPYNFEIYVNAIYAVNKKVTGIKEKILGHHGAGFIWNAEEWKVQ

Sequences:

>Translated_529_residues
MKKMKSIKKATAMLLIALFTLPMIFTGCSSKKEQSEKDDKKGKTVVYGAEFEDEKLNPVLAPAYANDLIFRGLMRFDKDN
KPQCDIAESYKKSTDGLTYDFKIKKGVKFHDGKELKAEDVVFTIKSIQDPKVNTEMKPEFEEVKDIKAEGDYNVKVTLAK
PFPALLDKLTIGIVPKHALEGKDLNNAEFNQKPIGAGPFKFVKWEKGNNITLSKFEDYYGKDKTGNVEKFIFKFIPDYNV
RAMQLETGEIDLAYVEPSQVAKLEKLEKMQIYNENTADYRCFMFNMRKELWKDVNVRKAFNYAVDRKGMVDGILKGFGVE
AYSPLQKNKFNNANVEKYSYNLEKANELLDKAGWKKGQDGIREKNGKKFEFTLTAPSTDEVRVKIANYLASQFKKIGVTV
KVAALDWNAIKIDECEAFVLGWGSPYDADDHTYKLFHSSQIKNGNNFGAYSNPKVDKLLEEGRTTEDEGKRKEIYGKLQE
ELANDPPYNFEIYVNAIYAVNKKVTGIKEKILGHHGAGFIWNAEEWKVQ
>Mature_529_residues
MKKMKSIKKATAMLLIALFTLPMIFTGCSSKKEQSEKDDKKGKTVVYGAEFEDEKLNPVLAPAYANDLIFRGLMRFDKDN
KPQCDIAESYKKSTDGLTYDFKIKKGVKFHDGKELKAEDVVFTIKSIQDPKVNTEMKPEFEEVKDIKAEGDYNVKVTLAK
PFPALLDKLTIGIVPKHALEGKDLNNAEFNQKPIGAGPFKFVKWEKGNNITLSKFEDYYGKDKTGNVEKFIFKFIPDYNV
RAMQLETGEIDLAYVEPSQVAKLEKLEKMQIYNENTADYRCFMFNMRKELWKDVNVRKAFNYAVDRKGMVDGILKGFGVE
AYSPLQKNKFNNANVEKYSYNLEKANELLDKAGWKKGQDGIREKNGKKFEFTLTAPSTDEVRVKIANYLASQFKKIGVTV
KVAALDWNAIKIDECEAFVLGWGSPYDADDHTYKLFHSSQIKNGNNFGAYSNPKVDKLLEEGRTTEDEGKRKEIYGKLQE
ELANDPPYNFEIYVNAIYAVNKKVTGIKEKILGHHGAGFIWNAEEWKVQ

Specific function: Required for transport of an unidentified substrate [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789966, Length=524, Percent_Identity=26.1450381679389, Blast_Score=162, Evalue=4e-41,
Organism=Escherichia coli, GI1787052, Length=510, Percent_Identity=24.7058823529412, Blast_Score=149, Evalue=5e-37,
Organism=Escherichia coli, GI1789887, Length=453, Percent_Identity=25.1655629139073, Blast_Score=139, Evalue=4e-34,
Organism=Escherichia coli, GI1787762, Length=437, Percent_Identity=27.2311212814645, Blast_Score=122, Evalue=6e-29,
Organism=Escherichia coli, GI1787495, Length=496, Percent_Identity=24.5967741935484, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789397, Length=482, Percent_Identity=24.0663900414938, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI87082063, Length=433, Percent_Identity=22.4018475750577, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787551, Length=433, Percent_Identity=23.094688221709, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1786256, Length=156, Percent_Identity=28.8461538461538, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 60355; Mature: 60355

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00092 N6_MTASE ; PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMKSIKKATAMLLIALFTLPMIFTGCSSKKEQSEKDDKKGKTVVYGAEFEDEKLNPVL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEE
APAYANDLIFRGLMRFDKDNKPQCDIAESYKKSTDGLTYDFKIKKGVKFHDGKELKAEDV
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCE
VFTIKSIQDPKVNTEMKPEFEEVKDIKAEGDYNVKVTLAKPFPALLDKLTIGIVPKHALE
EEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHCC
GKDLNNAEFNQKPIGAGPFKFVKWEKGNNITLSKFEDYYGKDKTGNVEKFIFKFIPDYNV
CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHCCCCCCCCHHHHHHHHCCCCCE
RAMQLETGEIDLAYVEPSQVAKLEKLEKMQIYNENTADYRCFMFNMRKELWKDVNVRKAF
EEEEEECCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCHHHHH
NYAVDRKGMVDGILKGFGVEAYSPLQKNKFNNANVEKYSYNLEKANELLDKAGWKKGQDG
HHHHCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCC
IREKNGKKFEFTLTAPSTDEVRVKIANYLASQFKKIGVTVKVAALDWNAIKIDECEAFVL
HHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCEEEE
GWGSPYDADDHTYKLFHSSQIKNGNNFGAYSNPKVDKLLEEGRTTEDEGKRKEIYGKLQE
ECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH
ELANDPPYNFEIYVNAIYAVNKKVTGIKEKILGHHGAGFIWNAEEWKVQ
HHCCCCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCCEEECCHHCCCC
>Mature Secondary Structure
MKKMKSIKKATAMLLIALFTLPMIFTGCSSKKEQSEKDDKKGKTVVYGAEFEDEKLNPVL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEE
APAYANDLIFRGLMRFDKDNKPQCDIAESYKKSTDGLTYDFKIKKGVKFHDGKELKAEDV
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCE
VFTIKSIQDPKVNTEMKPEFEEVKDIKAEGDYNVKVTLAKPFPALLDKLTIGIVPKHALE
EEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHCC
GKDLNNAEFNQKPIGAGPFKFVKWEKGNNITLSKFEDYYGKDKTGNVEKFIFKFIPDYNV
CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHCCCCCCCCHHHHHHHHCCCCCE
RAMQLETGEIDLAYVEPSQVAKLEKLEKMQIYNENTADYRCFMFNMRKELWKDVNVRKAF
EEEEEECCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCHHHHH
NYAVDRKGMVDGILKGFGVEAYSPLQKNKFNNANVEKYSYNLEKANELLDKAGWKKGQDG
HHHHCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCC
IREKNGKKFEFTLTAPSTDEVRVKIANYLASQFKKIGVTVKVAALDWNAIKIDECEAFVL
HHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCEEEE
GWGSPYDADDHTYKLFHSSQIKNGNNFGAYSNPKVDKLLEEGRTTEDEGKRKEIYGKLQE
ECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH
ELANDPPYNFEIYVNAIYAVNKKVTGIKEKILGHHGAGFIWNAEEWKVQ
HHCCCCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCCEEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]