| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754215
Identifier: 170754215
GI number: 170754215
Start: 934671
End: 935456
Strand: Direct
Name: 170754215
Synonym: CLD_3750
Alternate gene names: NA
Gene position: 934671-935456 (Clockwise)
Preceding gene: 170755235
Following gene: 170757537
Centisome position: 23.61
GC content: 29.26
Gene sequence:
>786_bases ATGGATGTAAAGAAGGTAAGAGACTTAACATTAATTTCTCTAGATAAAGATAAAACCTTAGTTGTGGCTTGTGATAGTTC GGGAAGTATTGGGCCTAAAAAAAATGACATATTAAAAATACCAGCTTTTTATACAGGTAAATTTACTATTAGAGTAGGTA TTTTAGAGGTTATGTGTACAGGAGCAGAAATTGTAACAGTCACTAATGCGGTATGCTGTGAAATGAATCCTACAGGAAGA GAAATAATAGATGGTATAAAAGGTGAATTAAAAAGAGCTGGTATTGATGAAGTAGTTTTAACAGGAAGTACTGAGGAAAA TTTTCCTACTTTTTCCACAGCTTTGGGGATAACTGTTTTAGGTATAGTGGATAATTCTGTAATAAGAGTTAACAATGTGA ATAAGCTTAATGAGGATATTGAAAATCATAATAAATCTAATGTGAATGAGATTTTGCTAATATCTGTAGGAGTGCCTAAG GTAGGAGAAGAAATTAACATTTATGATGACAAAGAAATTGTTGATTATGAAGATATAAAAATATTATTGGAAAATCCTAA AGTATATGAAATTGTACCAGTAGGATCTAAGGGAATATTGTATGAGGGAGAAATTTTGGCTAGAAATAATAATTTAAAAC TAAAGTTAAAAGAAAATATATCTATAGATATTAAAAAATCTAATGGGCCAGCTACCACTGTAATAGCAGCAATACACAAG GGAGAATATGAGAATATAAGAGCAAAAATAAATAATGTAAATATAATAGGAAAACTAGAAAAGTAA
Upstream 100 bases:
>100_bases GGGATATTAAAAAAATTCTTTTAGCTTTTAATGAGAGTAAGATTTCGCATAAATTAGAAATAATTCAATAGTAAACTTTT TTGGAAAGGAAGTTAGTTTC
Downstream 100 bases:
>100_bases ATTTAATTTTAAAGTTGCAAAAATAAAAAATACACTCACAAACCAATTCATTTCGCTAAGAAGTTCTAAATTTGGCTTCA TTAAAAATTTTCTTTATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MDVKKVRDLTLISLDKDKTLVVACDSSGSIGPKKNDILKIPAFYTGKFTIRVGILEVMCTGAEIVTVTNAVCCEMNPTGR EIIDGIKGELKRAGIDEVVLTGSTEENFPTFSTALGITVLGIVDNSVIRVNNVNKLNEDIENHNKSNVNEILLISVGVPK VGEEINIYDDKEIVDYEDIKILLENPKVYEIVPVGSKGILYEGEILARNNNLKLKLKENISIDIKKSNGPATTVIAAIHK GEYENIRAKINNVNIIGKLEK
Sequences:
>Translated_261_residues MDVKKVRDLTLISLDKDKTLVVACDSSGSIGPKKNDILKIPAFYTGKFTIRVGILEVMCTGAEIVTVTNAVCCEMNPTGR EIIDGIKGELKRAGIDEVVLTGSTEENFPTFSTALGITVLGIVDNSVIRVNNVNKLNEDIENHNKSNVNEILLISVGVPK VGEEINIYDDKEIVDYEDIKILLENPKVYEIVPVGSKGILYEGEILARNNNLKLKLKENISIDIKKSNGPATTVIAAIHK GEYENIRAKINNVNIIGKLEK >Mature_261_residues MDVKKVRDLTLISLDKDKTLVVACDSSGSIGPKKNDILKIPAFYTGKFTIRVGILEVMCTGAEIVTVTNAVCCEMNPTGR EIIDGIKGELKRAGIDEVVLTGSTEENFPTFSTALGITVLGIVDNSVIRVNNVNKLNEDIENHNKSNVNEILLISVGVPK VGEEINIYDDKEIVDYEDIKILLENPKVYEIVPVGSKGILYEGEILARNNNLKLKLKENISIDIKKSNGPATTVIAAIHK GEYENIRAKINNVNIIGKLEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28589; Mature: 28589
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVKKVRDLTLISLDKDKTLVVACDSSGSIGPKKNDILKIPAFYTGKFTIRVGILEVMCT CCCHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEECCCEEECEEEEEEEEEEEEEC GAEIVTVTNAVCCEMNPTGREIIDGIKGELKRAGIDEVVLTGSTEENFPTFSTALGITVL CCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHCEEEE GIVDNSVIRVNNVNKLNEDIENHNKSNVNEILLISVGVPKVGEEINIYDDKEIVDYEDIK EEECCCEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCEECCCCCEE ILLENPKVYEIVPVGSKGILYEGEILARNNNLKLKLKENISIDIKKSNGPATTVIAAIHK EEECCCCEEEEEECCCCCEEEECEEEEECCCEEEEEECCCEEEEECCCCCCEEEEEEEEC GEYENIRAKINNVNIIGKLEK CCCCEEEEEEEEEEEEEEECC >Mature Secondary Structure MDVKKVRDLTLISLDKDKTLVVACDSSGSIGPKKNDILKIPAFYTGKFTIRVGILEVMCT CCCHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEECCCEEECEEEEEEEEEEEEEC GAEIVTVTNAVCCEMNPTGREIIDGIKGELKRAGIDEVVLTGSTEENFPTFSTALGITVL CCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHCEEEE GIVDNSVIRVNNVNKLNEDIENHNKSNVNEILLISVGVPKVGEEINIYDDKEIVDYEDIK EEECCCEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCEECCCCCEE ILLENPKVYEIVPVGSKGILYEGEILARNNNLKLKLKENISIDIKKSNGPATTVIAAIHK EEECCCCEEEEEECCCCCEEEECEEEEECCCEEEEEECCCEEEEECCCCCCEEEEEEEEC GEYENIRAKINNVNIIGKLEK CCCCEEEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA