Definition Shewanella woodyi ATCC 51908 chromosome, complete genome.
Accession NC_010506
Length 5,935,403

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Identifier: 170728765

GI number:

Start: 5380167

End: 5381648

Strand: Direct

Name: Not Available

Synonym: Swoo_4444

Alternate gene names: NA

Gene position: NA

Preceding gene: 170728762

Following gene: 170728766

Centisome position: NA

GC content: NA

Gene sequence:

>1482_bases
ATGAGTTTTAAGGATTTACGCAGTTTTATAGACCACCTAGAAAGCCAAGGTGAACTAAAGCGTATTAGCCATCCGGTCGA
TCCTAATCTTGAAATGACAGAGATCGCCGATCGCGTGTTACGCGCTAAAGGGCCAGCCCTGTTATTTGAAAACCCTGTAG
GCAATGATATGCCTGTTTTAGCTAACCTTTTTGGTACGCCAAAACGCGTTGCTATGGCATTGGGTAAAGAGGACCCCCTC
GCACTAAGAGAGGTCGGTGAGCTATTGGCTTTTCTGAAAGAACCTGAGCCACCTAGAGGGTTTAAAGACGCGATCGCTAA
GATCCCCATGTTTAAGCAAGCCCTAAACATGCCACCTAAGACAGTCCGCAATCCGCCCTGCCAGCAAGTAGTCAAAACGG
GAGAGGAGGTCGATCTCACTAAACTCCCCATTCAGCACTGCTGGCCTGGTGATGTCGCCCCGCTAGTGACTTGGGGATTA
ACCATCACTAAGGGACCTCGCCAAAAGCGCCAAAACTTAGGGATCTACCGTCAGCAGCTTCTCGGGAGAGACAAACTGAT
AATGCGCTGGCTCGATCACCGTGGTGGTGCATTAGATTTTAAAGATTTTAAAGAGAAACACCCAGGTGAACGCTACCCAG
TCGTCGTTGCCTTAGGTTCAGATCCTGTGACCATTTTAGGCGCGGTAACTCCAGTACCAGACTCCATGAGCGAGTATGCT
TTTGCAGGCCTTCTGCGCGGTGAGCGCACCGATGTCTGCAAGGCGATAAGCTGCGATTTAGAGGTACCGGCCACTAGTGA
GATCATTCTCGAAGGTTATATTGACCCTGATGAGATGGCAGAAGAGGGTCCCTATGGTGATCACACGGGTTACTATAATG
AGACTGACTCATTCCCTGTCTTTACCGTGACCCATATTACCCACAGAAAAGATGCCATCTACCACAGTACCTACACAGGC
CGTCCACCTGATGAGCCGGCTATGCTAGGTGTCGCACTTAATGAAGTGTTCGTGCCTATCTTACGTAAGCAGTATCCAGA
AATTATCGACTTTTATCTGCCACCTGAAGGTTGCTCCTACAGAATGGCCGTGATCTCCATACGTAAACAGTACCCGGGTC
ATGCTAAACGGGTCATGATGGGTGCTTGGTCATTCCTGCGTCAGTTTATGTACACTAAATTTATCGTCGTAGTAGATGAG
GATGTGAACTGCCGAGATTGGAACGATGTCATCTGGGCCATCACCACGCGCATGGATCCTAAACGTGATACTGTAATGAT
AGAGAACACACCTATCGATTACCTCGATTTCGCCTCTCCGGTTGCAGGACTCGGCTCTAAGATGGGCATGGATGCAACCA
ATAAGTGGGAAGGTGAAACCGATCGCGAATGGGGAACACCTATCGTCATGGATCAAGCGGTAAAAGATAAAGTTGACCAG
ATCTGGGCCGACTTGGGCATAGATGACGCCCCTACCCTATAA

Upstream 100 bases:

>100_bases
CTGACTTATCTATTTATCGACTATTTAAAGCAGTTAAACATGTGTACTAAAAATGCTATAGTGCGCGCAATATCACATTT
ATAAGCAGGGTTATTTCCAC

Downstream 100 bases:

>100_bases
TTTTACCAATATAGCTATTAAACCTCCAAAGAGGGGTAAATAAAGGAAGTTAGATGAACACCATTCGTTGTCAGATAGAG
AAAGTGACCCCATTTAATGA

Product: UbiD family decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>493_residues
MSFKDLRSFIDHLESQGELKRISHPVDPNLEMTEIADRVLRAKGPALLFENPVGNDMPVLANLFGTPKRVAMALGKEDPL
ALREVGELLAFLKEPEPPRGFKDAIAKIPMFKQALNMPPKTVRNPPCQQVVKTGEEVDLTKLPIQHCWPGDVAPLVTWGL
TITKGPRQKRQNLGIYRQQLLGRDKLIMRWLDHRGGALDFKDFKEKHPGERYPVVVALGSDPVTILGAVTPVPDSMSEYA
FAGLLRGERTDVCKAISCDLEVPATSEIILEGYIDPDEMAEEGPYGDHTGYYNETDSFPVFTVTHITHRKDAIYHSTYTG
RPPDEPAMLGVALNEVFVPILRKQYPEIIDFYLPPEGCSYRMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVVVDE
DVNCRDWNDVIWAITTRMDPKRDTVMIENTPIDYLDFASPVAGLGSKMGMDATNKWEGETDREWGTPIVMDQAVKDKVDQ
IWADLGIDDAPTL

Sequences:
NA

Specific function: NA

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA