Definition Shewanella woodyi ATCC 51908 chromosome, complete genome.
Accession NC_010506
Length 5,935,403

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The map label for this gene is metH

Identifier: 170728413

GI number:

Start: 4960016

End: 4963771

Strand: Direct

Name: metH

Synonym: Swoo_4088

Alternate gene names: NA

Gene position: NA

Preceding gene: 170728390

Following gene: 170728414

Centisome position: NA

GC content: NA

Gene sequence:

>3756_bases
ATGACCACTGGAACCCTAAGAACCAAAAACATAAAAGCGAAAGGCCAACAACTCGAGCAGCAGCTAAAGCAGCAACTGAG
CGATGGGATCCTTATCCTAGATGGCGCCATGGGCACCATGATCCAAGACTGCAAATTCGAAGAGGATGCCTTTCGTGGTG
AGCAGTTTAAGGAGTGGCATTGCGATGTTAAGGGCAACAACGACATGTTGGTGCTCACCCAGCCAGATGCGATTAAACAG
ATCCATAAAGATTACCTACTGGCTGGTGCCGATATTATCGAGACCAACACCTTCAACGCGACTCGTATCGCCATGGCCGA
TTACGACATGCAGGAGCATTCGGCCTCGATCAACCTTGAGGGTGCTCGCTTAGCCCGCGCCGCTGCCGATGAAGTCGAAC
AAGAGACTGGCCGAAGCTGTTATGTGGCGGGTGTTCTCGGACCAACCAACCGAACCTGTTCAATCAGTCCCGATGTCAAC
GACCCTGGCTACCGTAATGTTAGCTTCGATGAATTAGTCGAAGCCTATATTGAGTCTATCAATGCATTAGTCCAAGGCGG
CGCCGATATCCTCATGGTGGAAACCATCTTCGATACGCTCAACGCCAAAGCGGCACTGTTTGCTATTGAAACCGTATTTG
ATGAGCAAGATTTCCGTTTGCCTATCATGATCTCAGGCACCATAACCGATGCCTCAGGCCGTACCCTTACCGGACAAACC
ACCGAAGCCTTCTACAACTCATTACGTCACGTTAAGCCACTCTCTATCGGCCTTAACTGTGCATTAGGACCAAAAGAGCT
GCGTCCATATGTAGAAGAGTTATCAAAAATTTCTGAGTGTTTCGTCTCGGCGCACCCCAATGCGGGGCTGCCAAATGAGT
TTGGTGGTTATGATGAAACCCCCAAACAGATGGCCGATATCATTGGCGAGTGGGCCGAGGAGGGCTTCCTCAATATTATC
GGTGGCTGTTGTGGTACTACACCCGATCACATCCGCGTCATTCGTGAAGCTGTGATTAAGCACCCGGCGCGTAAACTGCC
TGATATTCCAGTGGCTTGTCGTCTCTCAGGCCTTGAGCCTCTGACCATAGATGAGAACTCACTCTTCCTAAACGTAGGTG
AGCGTACCAACGTCACTGGCTCTGCCAAGTTTCTGCGCCTGATTAAAACTGGCGAATATGAAGAAGCACTGAGTGTCGCC
CGCGATCAAGTGGAAAACGGCGCTCAGATCATCGATATCAATATGGATGAGGGGATGCTCGACGGCGTCGAGGTGATGCA
CAAATTCCTCAATCTTATCGCTTCAGAGCCAGATATCTCTCGCGTACCGATTATGATCGACTCCTCCAAATGGGAGGTGA
TCGAAGCCGGTCTTAAATGCATTCAAGGCAAAGGGATCGTTAACTCCATCTCCCTAAAAGAGGGCGAAGAGAAGTTTATT
GAGCAAGCCAAACTGGTTAAACGATATGGCGCTGCTGCCATTATCATGGCCTTCGATGAAACAGGCCAAGCGGACACCGA
GGCGCGCAAAGTCGAGATCTGTACTCGCGCCTATAACGTCTTAGTCGACAAGGTTGGCTTCCCACCAGAAGATATTATCT
TTGACCCCAACATCTTCGCCATCGCCACCGGTATCGAGGAGCATGATAACTACGCCGTCGATTTTATCGAGGCAACCCGC
GAGATAAAGCGCACTCTACCCCACGCAATGATCTCGGGCGGTGTCTCCAATGTCTCCTTCTCATTTCGCGGTAATAACCC
GGTGCGAGAAGCAATTCACGCCGTGTTCCTCTATCACGCGATTCAAGCTGGCATGGACATGGGTATCGTTAACGCTGGGC
AGCTGGCCATTTATGACGATATCGACCCAGAACTCAAAGAGAAAGTTGAAGCCATAGTACAAAACCTCCCCTGCAGCGCA
GTGGATAAAAACGGTGAAGCAACCAATAACACCGAACAGCTACTAGAGGTCGCGGAAAAATTCCGTGGCGATGGGGCTCA
GGCTGGTAAAAAAGAGGATCTCGAGTGGCGCACTAAACCGGTTAACGAGCGTTTAGCTCACGCACTGGTCAAGGGCATTA
CCGACTATATCGATGAGGATACCGAAGAGGCGCGTACAGCGGCCACCAGACCACTGGATGTCATTGAAGGTCCGCTGATG
GACGGCATGAACATCGTTGGCGATCTCTTTGGCTCCGGCAAGATGTTCCTACCACAGGTGGTAAAATCCGCCCGCGTGAT
GAAAAAAGCTGTGGCTTACCTCAACCCTTACATCGAGCTTGAAAAGGTCGCCGGTCAATCTAACGGTAAGATCTTAATGG
TCACGGTAAAAGGTGACGTACACGATATTGGCAAGAACATTGTTGGCGTGGTACTGGCCTGTAACGGCTATGAGGTGATT
GATCTCGGTGTGATGGTCCCTGTAGAGAAAATCATTGAGGTCGCCAAAGCGGAGAATGTCGATATTATCGGGATGTCAGG
ACTTATCACCCCGAGTCTAGACGAGATGGTGCATAACGTTAAAAGCTTCCATAAAGCGGGCCTCACCATCCCTTCGATTA
TTGGTGGTGCCACCTGCTCTAAAATTCACACCGCAGTGAAAATAGCCCCACATGCACCAACGGGCGCCATCTATATTGCC
GATGCTTCGCGCGCCGTCCCTATGGTTTCTAAGCTCATTAACGATGACACTCGTCAAGCCACCATAGATGAAGCCTATAA
CGAATATGATGTGATGCGTGAAAAACGCCTGTCACAGGCTAAACGTAAAATGATCACCTCAATCGAAGCTGCCCGTGAAA
ATCGTTGTCAGCACGACTGGGAGAGCTACACCCCATTTGTGCCTAACCAACTAGGTCGTCAGGTATTCGATGATTATCCA
CTAGAAGATCTCGTCGATCGCATCGACTGGACACCGTTTTTCCGCAGCTGGGAGCTGCACGGTCACTTCCCTAAGATTTT
AGATGATGAAGTCGTGGGTGAAGAGGCACGTAAACTGTTTAGCGACGGTAAGGCCATGCTTAAGAAGATCATCGATGAGA
AGTGGCTCACCGCCAAAGGCGTTATCGGTCTGTTCCCTGCAAATACCGTGGGACATGACGACATAGAGCTTTACACTGAT
GAAAGCCGTAGTGAACTTGAGATGACGACCCATCATCTGCGGATGCAGATTGAACGTGTGGGCAATGACAACTTCTGCCT
CGCCGACTTTGTCGCCCCTAAAGACTCTGGCGTAGCCGATTACATGGGTGGCTTTGCAGTTACCGCAGGTCACGGTATCG
ACGAGCATGTTGAGCGTTTCGAGGCTGACCACGATGACTACAGCGCCATTATGCTCAAGTGTCTGGCAGACCGCTTGGCT
GAAGCCTTCGCCGAACGTATGCATGAGCGTGTCCGTAAAGAGTTCTGGGGTTATGCTGCCGATGAGGTACTCGATAACGA
AGCGCTTATTCGTGAAAAATACAAAGGGATCCGCCCCGCACCGGGTTACCCAGCTTGTCCCGATCACACCGAGAAAGGCT
TGCTATGGGATCTACTAAAACCCGATGAAACTATCGGTCTTAACATCACTGAAAGCTTTGCTATGTTCCCCACCGCCGCA
GTATCAGGCTGGTATTTTGCCCATCCTAAATCACGCTACTTTGGTGTGACCAATATTGGACGCGATCAGGTAGAAGATTA
TGCAGCGCGTAAGGGGATGAGTGTGGAGGAGGTTGAGAGGTGGCTAGCACCAGTGTTGGATTATGATCCGGAGTAA

Upstream 100 bases:

>100_bases
AAATTGGTATAAAAACAGAGTAAACATCTGAAAGTATAGATTTATAATATAGGCACACGCTTGAGCCTGAGCAATTAAGT
CGTTAAAACAGGTAGAATTT

Downstream 100 bases:

>100_bases
TCATAGGTTTACTCTTTTCATGTCCAAACTTCGTTTGGATTAAGGTCGCAGGGTTCCACCCTGCACTGGGCAAGAAGGAC
TGCTCGTCCTATCCTCCTTG

Product: B12-dependent methionine synthase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1251_residues
MTTGTLRTKNIKAKGQQLEQQLKQQLSDGILILDGAMGTMIQDCKFEEDAFRGEQFKEWHCDVKGNNDMLVLTQPDAIKQ
IHKDYLLAGADIIETNTFNATRIAMADYDMQEHSASINLEGARLARAAADEVEQETGRSCYVAGVLGPTNRTCSISPDVN
DPGYRNVSFDELVEAYIESINALVQGGADILMVETIFDTLNAKAALFAIETVFDEQDFRLPIMISGTITDASGRTLTGQT
TEAFYNSLRHVKPLSIGLNCALGPKELRPYVEELSKISECFVSAHPNAGLPNEFGGYDETPKQMADIIGEWAEEGFLNII
GGCCGTTPDHIRVIREAVIKHPARKLPDIPVACRLSGLEPLTIDENSLFLNVGERTNVTGSAKFLRLIKTGEYEEALSVA
RDQVENGAQIIDINMDEGMLDGVEVMHKFLNLIASEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISLKEGEEKFI
EQAKLVKRYGAAAIIMAFDETGQADTEARKVEICTRAYNVLVDKVGFPPEDIIFDPNIFAIATGIEEHDNYAVDFIEATR
EIKRTLPHAMISGGVSNVSFSFRGNNPVREAIHAVFLYHAIQAGMDMGIVNAGQLAIYDDIDPELKEKVEAIVQNLPCSA
VDKNGEATNNTEQLLEVAEKFRGDGAQAGKKEDLEWRTKPVNERLAHALVKGITDYIDEDTEEARTAATRPLDVIEGPLM
DGMNIVGDLFGSGKMFLPQVVKSARVMKKAVAYLNPYIELEKVAGQSNGKILMVTVKGDVHDIGKNIVGVVLACNGYEVI
DLGVMVPVEKIIEVAKAENVDIIGMSGLITPSLDEMVHNVKSFHKAGLTIPSIIGGATCSKIHTAVKIAPHAPTGAIYIA
DASRAVPMVSKLINDDTRQATIDEAYNEYDVMREKRLSQAKRKMITSIEAARENRCQHDWESYTPFVPNQLGRQVFDDYP
LEDLVDRIDWTPFFRSWELHGHFPKILDDEVVGEEARKLFSDGKAMLKKIIDEKWLTAKGVIGLFPANTVGHDDIELYTD
ESRSELEMTTHHLRMQIERVGNDNFCLADFVAPKDSGVADYMGGFAVTAGHGIDEHVERFEADHDDYSAIMLKCLADRLA
EAFAERMHERVRKEFWGYAADEVLDNEALIREKYKGIRPAPGYPACPDHTEKGLLWDLLKPDETIGLNITESFAMFPTAA
VSGWYFAHPKSRYFGVTNIGRDQVEDYAARKGMSVEEVERWLAPVLDYDPE

Sequences:
NA

Specific function: NA

COG id: COG1410

COG function: function code E; Methionine synthase I, cobalamin-binding domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA