| Definition | Shewanella woodyi ATCC 51908 chromosome, complete genome. |
|---|---|
| Accession | NC_010506 |
| Length | 5,935,403 |
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Identifier: 170725814
GI number:
Start: 1836811
End: 1841082
Strand: Direct
Name: Not Available
Synonym: Swoo_1457
Alternate gene names: NA
Gene position: NA
Preceding gene: 170725813
Following gene: 170725815
Centisome position: NA
GC content: NA
Gene sequence:
>4272_bases ATGTGGAATGTTCGCAATATATATATAATAAAAAAAGTTATGGTTATTGCCTTGTTAGTGCTTATCTCGTTACCAGTACT ATCTGAGAATGATGGGGACGATGAAGAGCTTAACAACAATGAATTTTTGAATGACTCTTTTATCAAAAAATTGACCCCGA ATTATGGACTCAGTTTTCACTCCAGTGATTTGATGGGGGAGAAATATGATATTGCTAATGGTCTGTTAACGTTTCACCGA ACTGATGCAAATATTCCCGGGAACTCAGGCTTACAAGTCGCGTACAACACTTCATTTACGGTTGATAGGCCAGAAATTAC AGGCTGGAAAGAGGAGCTTCCTCGAATTGAATTTCAAATGGTAAGAAGTTACGGGCAAGCTGAAGATTTTTATTTTGCTG AAGCATGGAAGTCGAACAGTAACAATCGTTGTTCTGGCTTACAACATTTACGGGGGATTACTGCTTCTTATGATGATGAA AATGGTAACAGTACTAATGTTCGTCTTCGTGGTGATAGGTATTCTTCTGGATTAAGACTTATCATTCCCAATAAGGTCTC TAGTATCTTGATGTATCCTAGCCCAAATCAATTGGAAGATTTACCACAAGGTACACGCTATTCAACGAATAATGATTGGG TTATATCTTGCTTTACAACAGGTGGAAATGAAGGCTTTTTAGCGACAAGTCCAGAAGGGGTCAAGTACTATTTAGATGAG TATAAGTTTTATAAATATGAACTGAATAGTAATACATCTGAGATTTCATTACCGAGTCGTGGTGGCTCCAGTTCATATCG TAAAGTAAAACATGCCTTATATGCTTCTAAGGTAGAGGACAGGTTTGGTAATGTTGTTGAATATCAATATAATGATAAAA AAGAGCTCATAAAAATTGTATCTAATGATGGAAGGGAAGTTACTGTTGAACGACCATCAAACTCAGTTAAATTAATTAAA TCATCAGGCAAAGTGTGGAAATATGTGTCTGGAGGCTCTTACACTACAAATACCTCTCTTTTAGAGGTGACTATGCCTGA TGGGAGAAAGTGGAATTACGATCTTCATTATGTTGACGAGCCGGATGATCAAGAAGATTCTTGTAGCTCTTCTATAAGCC CTACTTTGGAGGAGATGAATGTCACTCACCCTGATGGCTCGTCTGCTATTTTCTACTTTGGTGCTAGGGAGTTCTTTAGG GCTAATGTTAAGTGGTGGTTTCTAAAAAGCCTTTATGATTACAATGATCTTCCTGACCACACCTGTACTAACAATTATGC GTTAGTAAAGAAAAAGTTGAATGTTTTAAGTGAGGAATATGTATGGCGGTATTCATACTCTGAAAATTCTGGTCACTATA GAGGGAAAACTAGAGAGCGATTCCAAGATTTAGAGGGCGATATTCCAAATAATATAGACAGGCTCTTACATAGAACGACC ACAGTTACAAACCCCGACCTATCAAAAATAGTTTATTACGTAAATAGGGATTCTTGGTCATGGAAAGAGGGGAAAATTGA AGCAGTAGAAAAACTTGATGGAAATAATACTTTAGTAGAGCAAGTTCAATATGAATTTGATGCTCCAGAGTACAATGGAT ACCCCGTGAATAGTGATTTTTATAATAATTATTCAAAGCGGGCAAATGGGATCAAAACTAAAACGACCTCTATTTATGAT GACGATGTATTCGTAAGTGATGTAGTTGAGTTTAATAAATTTGGTCGTCCTTTGATAACTTCAGAGTCCTCAACGGTATT TTCTGAGAAAAAATACAGGAAAGTAGAGTACCAACACGATAAAAATAACTGGGTACTCAATTTACCCACTAAACAATATG TATCAAGCACCTCTAGTTTTGGAGAGCCCTATAAAGAAACAACATACAATAATAGCTTGTTACCCTATCAGAAAAAGTTA TTTGGTCGTTTAGTTTCAACCAATACCTATCACGCTGACGGTAATCTTAAGAAAACAACTTTTAGTGGCTTAAACCGTTA TGAGCAGTTTGATGATTACTATCGCGGTAAAGCCCGTAAAATCACTATGCCTTGCGCAACCACAAATGGTTGTAATACAG CAAATGGCAGCACCACTAATACAGTCATTGCTAAGCTAGAAGTTAATAGTGATGGCACCACAAAAAGTGTGACTGATTTT AATGGCCATAAAACCAGTTATAGCTATAACCCAATTGGTTGGTTAACTAAGATTGATTATGTCAATGGTGACTGGTCTGA CAAAATCATCAAATACGCTCAGGTGACCACTGCAAATGATGGTATCACCGGTAGCGGTATCGCAGTTGGCCAACTTAAAC AAACCATTACTCAAGGCAATTTTGAGCAGAAAATCTATCATGATGGTCTGTTACGCCCAACCTTCACGCGAACAAGAGAT AAAGCCAACAGTGACACTATCAGTTACCAACGTACTGAGTATGACCATGAAAACCGCCCAACACTGCAATCCTTCCCAAG TAGTAATGCAAGTGCGACAACTGGCACGGTAACAACATATGATGCTCTAGGTCGTGTAATTGGGACCTTGCGTCAAAGCG ATAATGCCGCTAGTAGTATCGAATACTTAAGTGGTAACAAACAAAGAGTCACCGATGCTAAAGGCAATGTGACTACAACA ACCTATCTGGCGTATGGTAGCCCCAGTTATGACAAGCCAACGTTTATAGATGCCCCAGACAGTGAGGATACCAGCATTGC CTACAACAAATTCGGTCAGATTAAAACAATTACCCAAGGAGAGGTGACCGAAAAGCGCTTATATGATGGTTATCAACAAC TGTGTAAAACCTATCGTCCTGAAACGGGAGTAACTGCTTATGGTTACAACACACAGCGCCAGCCTATTTGGCGTGCTGAG GGGACTGATGGAGGTCATGTTAGCTGCACGCCATCATCGGTGCCTGCATCACATAAAGTGATTATTGGTTATGACAATCT AGGACAATTAAGAACTGAAAACTTCCCCGACACCACACCTGATAATACCTATGGTTATGATGCGAATGGTAATCTTGCAA GTCTGACCTCAGGCAGTGGTAGCAGCGCCATTAGTTGGAGCTACCTGTACAACTCACTTAACCTGATAGATAAAGAAACC CTATCCATCGACGGCAAAAGTTTTGTGTTGGATTGGGAGTATAACAGCTTAGGAAACGTAGACTCCTTAACGTATCCTTC AGGAAGGCCTATTAGTTTTGCCCCGAATGCTTTAGGGCAGCCAACCAAGGCGAGTGAAGGGGTTATCAATTACGCCAGTG ATATAGAATACCATCCCAACGGCCAGTTAAAACAGCTGACCTATGGTAATGGGATGGTGCGTAATGTGGCTTTAGATACC ACAGGGCGTATCGATGCCATCACTGATGCTAAGGGAAGCGCTTATCAACTGAACTTAGATCCAAGTTATGACTTAAACGA TAACATTCATAGTGTTATCGACTGGGTTGACCGCAGCAATGATATCGACAACATGAGTTATGACGGCCTAGACCGTTTAA AGTCTGCTGATGGTAAGTGGGGCACTGGCAATTACACTTATGATGGATTAGGTAATATCAAAACCCGCAGTATCAGTGGT TCATCGATTACTTACCACTACAATACGCTCAATCGCCTCGACAAACTTAGTGGAGCTTATGCCTACAACTATGCATACGA TACCCGCGGTAACGTGACTCACAATGGTCGCTATGGCTTAGGTTTTAACCGTGCGAATCAAGTCACCACAGCCAAAGGTA TCCCTTACCGTTACGATGGCCACAATCGCCGAGTATCAAAAAAAGCTGATGAATACAGTATTTATAGTCAAGCAGGTCAG CTACTTTATCGACAAAAAGACAATGGTGATAAAACCGATACTCTCTACTTAGGTAAGCAGTTAATTGCAGAGGTTGAGCA TAGAGGCACTTATACTCCCCCAGCACCCAAACCGAGCATTAGTCTTATCTTTTCTGGCGGGGGAAGCAGTGGTGGGGATT GCCCTAAAGGGTTTGTGTGTGAATCGGCAAGTGCCATACCGACTCTTCCCCCAGCTGATGCGTACACATTGTCATGGACA ACAAGCAATGCCGATAGCTGTACTGGTAAGGTCTTTAGAAATGGCTCTTTACACTCAACACTTTCAGGCATCAGCAATAC GGGGATTTACTTCGAAAATGAAGGTGCGGGCTATGGAGCGGAGCTAACCTGTAGTAGCAGTGGTGGCACTACGACTAAAT TTGCGTATGCAGGCAATGGAGATGAATACTAA
Upstream 100 bases:
>100_bases AAACGAATGCCGGGAGTTTACCTTAAGTTGTGCGTTGCCTTTATTTAATAGTTAAATACCGCAAGGCTAGACAGGGATAG TATTATTTTTGAGGTTAATT
Downstream 100 bases:
>100_bases TGAAAATATTAACATTCACTCGGTTTGCCATTAATTCATTTGTTGCGTTTGTCCTGTCAGTTGCTTCACTGTCTTTTCAA GCAGAGGCAAGCCAAGGGCA
Product: YD repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1423_residues MWNVRNIYIIKKVMVIALLVLISLPVLSENDGDDEELNNNEFLNDSFIKKLTPNYGLSFHSSDLMGEKYDIANGLLTFHR TDANIPGNSGLQVAYNTSFTVDRPEITGWKEELPRIEFQMVRSYGQAEDFYFAEAWKSNSNNRCSGLQHLRGITASYDDE NGNSTNVRLRGDRYSSGLRLIIPNKVSSILMYPSPNQLEDLPQGTRYSTNNDWVISCFTTGGNEGFLATSPEGVKYYLDE YKFYKYELNSNTSEISLPSRGGSSSYRKVKHALYASKVEDRFGNVVEYQYNDKKELIKIVSNDGREVTVERPSNSVKLIK SSGKVWKYVSGGSYTTNTSLLEVTMPDGRKWNYDLHYVDEPDDQEDSCSSSISPTLEEMNVTHPDGSSAIFYFGAREFFR ANVKWWFLKSLYDYNDLPDHTCTNNYALVKKKLNVLSEEYVWRYSYSENSGHYRGKTRERFQDLEGDIPNNIDRLLHRTT TVTNPDLSKIVYYVNRDSWSWKEGKIEAVEKLDGNNTLVEQVQYEFDAPEYNGYPVNSDFYNNYSKRANGIKTKTTSIYD DDVFVSDVVEFNKFGRPLITSESSTVFSEKKYRKVEYQHDKNNWVLNLPTKQYVSSTSSFGEPYKETTYNNSLLPYQKKL FGRLVSTNTYHADGNLKKTTFSGLNRYEQFDDYYRGKARKITMPCATTNGCNTANGSTTNTVIAKLEVNSDGTTKSVTDF NGHKTSYSYNPIGWLTKIDYVNGDWSDKIIKYAQVTTANDGITGSGIAVGQLKQTITQGNFEQKIYHDGLLRPTFTRTRD KANSDTISYQRTEYDHENRPTLQSFPSSNASATTGTVTTYDALGRVIGTLRQSDNAASSIEYLSGNKQRVTDAKGNVTTT TYLAYGSPSYDKPTFIDAPDSEDTSIAYNKFGQIKTITQGEVTEKRLYDGYQQLCKTYRPETGVTAYGYNTQRQPIWRAE GTDGGHVSCTPSSVPASHKVIIGYDNLGQLRTENFPDTTPDNTYGYDANGNLASLTSGSGSSAISWSYLYNSLNLIDKET LSIDGKSFVLDWEYNSLGNVDSLTYPSGRPISFAPNALGQPTKASEGVINYASDIEYHPNGQLKQLTYGNGMVRNVALDT TGRIDAITDAKGSAYQLNLDPSYDLNDNIHSVIDWVDRSNDIDNMSYDGLDRLKSADGKWGTGNYTYDGLGNIKTRSISG SSITYHYNTLNRLDKLSGAYAYNYAYDTRGNVTHNGRYGLGFNRANQVTTAKGIPYRYDGHNRRVSKKADEYSIYSQAGQ LLYRQKDNGDKTDTLYLGKQLIAEVEHRGTYTPPAPKPSISLIFSGGGSSGGDCPKGFVCESASAIPTLPPADAYTLSWT TSNADSCTGKVFRNGSLHSTLSGISNTGIYFENEGAGYGAELTCSSSGGTTTKFAYAGNGDEY
Sequences:
NA
Specific function: NA
COG id: COG3209
COG function: function code M; Rhs family protein
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA