Definition Shewanella woodyi ATCC 51908 chromosome, complete genome.
Accession NC_010506
Length 5,935,403

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Identifier: 170725311

GI number:

Start: 1258247

End: 1260172

Strand: Direct

Name: Not Available

Synonym: Swoo_0949

Alternate gene names: NA

Gene position: NA

Preceding gene: 170725310

Following gene: 170725312

Centisome position: NA

GC content: NA

Gene sequence:

>1926_bases
ATGAGCAAAGCTACCATCTTTACCCCTGACGATGTGTCGCATATATCAAACCGTTTAGAACTGCTTGCCCCAGCAAAAAA
TGCTGAGTTTGGTATGGAAGCGATTCTGCATGGTGCCGATGCGGTATACATTGGCGGGCCTGAATTTGGTGCACGCGCAA
CCGCGGGGAACAGTGTTGAGGATATTGCTCGGCTCTGTGCTTTCGCCCATAAATACCATGCTCAGGTTTTTGTCGCTATC
AATACCATCTTGATGGATGACGAACTTGCTGGTGCTGAAAAGTTGATCTGGCAAGTGTACGAGGCGGGAGCGGACGCGCT
TATTGTCCAAGATATGGGCGTGCTTCAGCTCGACCTTCCTCCTATTGCTCTGCATGCCAGTACTCAGATGGATAACCGCA
CTGCAGAGAAAGCGGTATTTTTAGAGCAGGTGGGCTTCTCTCAGGTGGTGCTCGCTCGTGAGCTGGGTTTAAGTCAGATC
CGTGAAGTGGCAGCGCACACTAAGATGCAGCTTGAGTTCTTTATCCATGGTGCGCTCTGTGTGGCCTATTCAGGTTTGTG
TAATTTAAGTCATGCCTTTAGTAATCGCAGTGCTAACCGAGGTGAGTGTTCTCAGATGTGTCGCTTGCCGGGTGAACTTA
AGACCCGACAAGGTGAAGTGCTTGCCGAAAATGAGCATCTGTTGTCCCTTAAAGATAATAACCAGACGGACAACCTTGAA
GCCTTAATTGATGCGGGGGTTCGCTCATTTAAGATTGAAGGGCGCCTGAAAGATATTAACTATGTGAAAAATGTCACCGC
GCATTACCGTCAAGAACTGGATAAGATCATCGCCCGTCGCCCAGAGCTTAAGGCGTCATCCCATGGTCGTTCACTGCACA
CCTTTACTCCCAATGTTGAGAAGACATTTAACCGTGGCCGTACCGATTACTTTGTGAATGAACGTAGCCAAGGTGTGAGT
GATTTCCGCTCTCCTAAATATATTGGTGAAGAGGTTGCGACAGTCAAACGTCTTGGTAAAGACTTTATTGAACTGGAGTC
GACGCATACCTTTAATAACGGTGATGGCCTCTGTTATTTTCCTGCCAATTACACTAAAGCCAAACAGTCTGATGACAAGT
TACAAGGGTTGCGAGTCAACCGCGCTGAGGGGTTAAAACTGCATGTGTTAACGGTGCCTGGCGATCTTGAAGTGGGCATG
ACTATCTACCGAAATCGTGACCAAGCCTTTGAGGCAGTACTTGCCAAAGAGTCCTCTAAACGCTCAATTGATGTCGATAT
CGTGATTGCTGATACCAGTGATGGCATCAAGATGACCATGACCGATCTGTATGGTCATCAAGGTGAGGTGAGCTTAGTCA
TGGATAAGCAGCCGGCGAACGACCAAGAGTCCGCCAGCGGTAAGTTACGCAAACAGCTGGCAAAACTAGGCAGTACCGAT
TTTGTGGCCAGAAAGGTAAGTATTGAAACTGAGCTGATCTGGTTTGCACCAGCATCTGTCATCAATGGACTTCGCCGTGA
TACCGTAGCCGCACTTGAAAAAGCCCGGGTTGATGAGTATCAAAGACCTAAGCCTTGGAAGCATAATCAAGACGCTATGT
ATCCTACTAAGCATCTGAGTTATCTCGCTAATGTGGCAAATCAAAAATCGAAAGATTTTTATCAGCAGCATGGTGTGATT
GAGATTGAAGATACCTATGAGAAGAACGGGATAACAGAGGAGGTGCCCCTAATGGTCACTAAACACTGTTTACGTTTTAA
CTTTAATCTCTGCCCTAAAGAGGTCCCAGGGATAAAAGCTGAACCTATGGTGCTTGAGATCGGTAAAGATGTATTGAAGT
TGGTTTTCGATTGCCCTAAGTGTGAAATGCTAGTGGTAGGTGCCAACCGTCAGGTTAAGAGCGACGGCAGAGAAGTCGTG
AACTAG

Upstream 100 bases:

>100_bases
TAGTTTAAACTGAATTTATATTCGCTAACCCCAATCGCACTCACTTTTTTGCTATAATATCCCACCAAAATTTACACATT
AACTTTTTTGAGTGATTTTT

Downstream 100 bases:

>100_bases
CCTTCGTTAACCCGCTAGGTTAACAGTTATAAATATCTTCAAGAGCGCCGACTATTTACCAGTAGTGGCGCTCTTTTGCT
TATAACGTGTTATGTTATTT

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>641_residues
MSKATIFTPDDVSHISNRLELLAPAKNAEFGMEAILHGADAVYIGGPEFGARATAGNSVEDIARLCAFAHKYHAQVFVAI
NTILMDDELAGAEKLIWQVYEAGADALIVQDMGVLQLDLPPIALHASTQMDNRTAEKAVFLEQVGFSQVVLARELGLSQI
REVAAHTKMQLEFFIHGALCVAYSGLCNLSHAFSNRSANRGECSQMCRLPGELKTRQGEVLAENEHLLSLKDNNQTDNLE
ALIDAGVRSFKIEGRLKDINYVKNVTAHYRQELDKIIARRPELKASSHGRSLHTFTPNVEKTFNRGRTDYFVNERSQGVS
DFRSPKYIGEEVATVKRLGKDFIELESTHTFNNGDGLCYFPANYTKAKQSDDKLQGLRVNRAEGLKLHVLTVPGDLEVGM
TIYRNRDQAFEAVLAKESSKRSIDVDIVIADTSDGIKMTMTDLYGHQGEVSLVMDKQPANDQESASGKLRKQLAKLGSTD
FVARKVSIETELIWFAPASVINGLRRDTVAALEKARVDEYQRPKPWKHNQDAMYPTKHLSYLANVANQKSKDFYQQHGVI
EIEDTYEKNGITEEVPLMVTKHCLRFNFNLCPKEVPGIKAEPMVLEIGKDVLKLVFDCPKCEMLVVGANRQVKSDGREVV
N

Sequences:
NA

Specific function: NA

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA