| Definition | Shewanella woodyi ATCC 51908 chromosome, complete genome. |
|---|---|
| Accession | NC_010506 |
| Length | 5,935,403 |
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Identifier: 170725003
GI number:
Start: 883168
End: 886005
Strand: Reverse
Name: Not Available
Synonym: Swoo_0638
Alternate gene names: NA
Gene position: NA
Preceding gene: 170725010
Following gene: 170725002
Centisome position: NA
GC content: NA
Gene sequence:
>2838_bases ATGGACAAGATTGAAGTACGTGGCGCCCGCACCCACAATCTAAAAAACATCAACCTGACAATTCCCAGAGACAAATTAAT CGTGATCACCGGCCTATCAGGTTCGGGGAAATCCTCTCTGGCGTTTGACACACTTTATGCCGAAGGGCAGAGGCGGTATG TTGAATCGCTTTCAGCCTATGCCCGCCAGTTCTTAAGCCTGATGGAGAAACCTGATGTCGATCATATCGAAGGGTTAAGC CCAGCCATCTCCATCGAGCAAAAGTCCACATCCCACAACCCAAGATCCACAGTGGGAACCATCACAGAGATCTACGACTA CCTCCGCCTTCTCTTTGCCCGCGTCGGTGAGCCACGCTGTCCCACACATGGCCAGCCCCTCACGGCACAAACCATCAGTC AGATGGTAGACAAAGTATTAGAGCTACCAGAAGGCAGTCGCCAGATGTTGCTTGCCCCTGTGGTCAATAACCGTAAAGGT GAGCACGTAAAGCTACTGGACAGCCTATCGGCGCAAGGATTCATCCGTGCCCGTATTGATGGTGAAGTGTGTGATCTCAC CGATCCACCAGAGCTTGAACTTCACGTTAAGCACACCATTGAAGTTGTGGTCGACCGCTTTAAGGTTCGTGATGATATTC AACAGCGATTAGCCGAATCATTTGAAACTGCACTGGAGCTTTCTGGCGGTATCGCCACCGTAGCTGACATGGATAGCGAA AGTAAGAATCCCGATGAAGAGCTACTCTTCTCGGCAAACTTTGCTTGTCCTCACTGTGGCTACTCGATGGCTGAGCTGGA ACCAAGAATATTCTCATTTAACAACCCAGCTGGTGCTTGTGGCACTTGCGATGGTTTAGGCGTACAGCAATATTTCGATC CAGAACGCGTTATCGTCAACAATGAGCTATCTCTAGCTGGCGGTGCTATTCGCGGCTGGGACAGACGCAACTTCTACTAC TTCCAGATGCTAAGCTCACTTGCCGAGCACTATAAATTTGATGTTGAGCAACCCTTTGTAAAACTTAGCGATAAAATACA AAAGCTGGTTCTACATGGCTCAGGCAGCGAGAGTATCGCCTTTAAATACATTAACGATCGTGGTGACGTAGTCGTTCGTA ATCACCCGTTTGAGGGCATACTTAACAACATGGACAGGCGCTACCGCGAGACAGAATCAAACGCTGTTCGCGAAGAGCTC TCCAAATTTATCAATACCCAGTCCTGTCAAAGCTGTCACGGCTCGCGTCTTCGTGAAGAGGCGCGTAATGTCTTTATCAA TGATCTGAGCATGCCTGAGTTAACCGAGTGGTCTATCGGTGAGGCGATGGAGTACTTCTCCACACTTAAGTTGACGGGAC AGAAAGCCCAGATTGCCGAAAAGATCCTTAAAGAGGTGGGCGATCGTTTAGGTTTCCTAGTCAATGTCGGGCTTAACTAC CTAAGCCTATCTCGCTCTGCCGACACACTCTCTGGTGGTGAAGCTCAGCGGATCAGGCTTGCAAGTCAGATAGGTGCAGG CTTAGTCGGCGTAATGTATGTGCTCGATGAACCCTCAATTGGTCTACACCAAAGAGATAATGAACGCTTACTGCAAACTC TTATCCATCTGCGCGATATAGGCAATACCGTTATTGTGGTCGAACACGATGAAGATGCCATTAAGATGGCAGATCACGTG ATCGATATTGGCCCTGGAGCCGGCGTACACGGTGGTGAAGTGATCTGTGACGGTACTTTAGAGGATATTCTCAGCTGTGA CGAATCAATTACTGGCCAATACCTCTCGGGCAAAAAACAGATCCATATCAGCGAGGAGCGAGTCGCGTATAACGGCGATA AGCTAATCGAGCTATTTGGTGCCAGTGGCAACAACCTAAAAGATGTGGACTTGACCATACCTGTTGGCCTATTTACCTGT GTGACTGGGGTATCTGGCTCAGGAAAGTCAACCCTGATCAACGACACCTTCTATAAGATTGCTCATCGAGTACTTAATGG CGCAACCGTGGATGAGCCAGCCCCTTATCGAGAAGTCAAAGGGATGGAGCATTGTGACAAGGTGGTCGATATCGATCAAA GCCCCATTGGCCGTACACCGCGTTCGAATCCAGCCACTTACACGGGGATTTTCACCCCAATCAGGGAGCTATTTTCGGCA ACTCAAGAGTCACGTACCCGAGGTTATAAACCTGGTCGTTTCTCATTTAACGTCAAAGGTGGACGCTGTGAGGCGTGTCA GGGTGATGGTTTAATCAAGGTTGAGATGCACTTCCTTCCTGATGTGTATGTTCCTTGTGATGACTGTAAGGGCAAGCGCT ACAATCGTGAAACTTTAGAGGTCAAATATAAAGGTAAGAGCATCCATGAGGTGCTCAATATGACCGTTGAAGAGGCAAGA CCTTTCTTCGATGCCGTCCCTGCCATTGCTAGAAAATTGCAAACCTTGATTGAAGTTGGCCTCTCCTATATCAGCTTGGG ACAGAGTGCGACTACACTTTCTGGCGGTGAAGCACAACGTGTTAAGCTGGCAAAAGAGCTCTCTAAGCGAGATACTGGTC AGACGCTCTATATTCTCGATGAGCCAACAACAGGACTACACTTTGCAGATATTCAATTACTATTGGATGTCCTGCACAGG TTAAAAGCTCACGGTAATACCATCGTGGTTATCGAGCATAATCTGGATGTGATCAAAACTGCAGACTGGATTGTCGATCT CGGACCTGAAGGCGGTGCTGGCGGCGGAACAATACTAGCGACAGGTACGCCAGAGCAAGTTGCCGAGCATAAAGAGTCTC ACACGGCACGCTTTCTTAAGCCTTTGCTAGAAAAATAA
Upstream 100 bases:
>100_bases CTTTCTCCCCTGCAGAATTTACTCTTGATCTTCTCCTCTCTGCTTTTGCTAATTTTTGTGCGATAATCGATCTCTTTTTT TATTTGGCATAGAGAGACAG
Downstream 100 bases:
>100_bases TTAACGAGATAAATGGGGAGAGAAGATGAGTCCAACACAGATTAAGCTCATCTCTCTCCGCTTCTCGTTTACCCTCTCGA TACTACTGCTCTTTAGCCTT
Product: excinuclease ABC subunit A
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>945_residues MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS PAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRCPTHGQPLTAQTISQMVDKVLELPEGSRQMLLAPVVNNRKG EHVKLLDSLSAQGFIRARIDGEVCDLTDPPELELHVKHTIEVVVDRFKVRDDIQQRLAESFETALELSGGIATVADMDSE SKNPDEELLFSANFACPHCGYSMAELEPRIFSFNNPAGACGTCDGLGVQQYFDPERVIVNNELSLAGGAIRGWDRRNFYY FQMLSSLAEHYKFDVEQPFVKLSDKIQKLVLHGSGSESIAFKYINDRGDVVVRNHPFEGILNNMDRRYRETESNAVREEL SKFINTQSCQSCHGSRLREEARNVFINDLSMPELTEWSIGEAMEYFSTLKLTGQKAQIAEKILKEVGDRLGFLVNVGLNY LSLSRSADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLIHLRDIGNTVIVVEHDEDAIKMADHV IDIGPGAGVHGGEVICDGTLEDILSCDESITGQYLSGKKQIHISEERVAYNGDKLIELFGASGNNLKDVDLTIPVGLFTC VTGVSGSGKSTLINDTFYKIAHRVLNGATVDEPAPYREVKGMEHCDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFSA TQESRTRGYKPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCDDCKGKRYNRETLEVKYKGKSIHEVLNMTVEEAR PFFDAVPAIARKLQTLIEVGLSYISLGQSATTLSGGEAQRVKLAKELSKRDTGQTLYILDEPTTGLHFADIQLLLDVLHR LKAHGNTIVVIEHNLDVIKTADWIVDLGPEGGAGGGTILATGTPEQVAEHKESHTARFLKPLLEK
Sequences:
NA
Specific function: NA
COG id: COG0178
COG function: function code L; Excinuclease ATPase subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA