Definition Shewanella woodyi ATCC 51908 chromosome, complete genome.
Accession NC_010506
Length 5,935,403

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Identifier: 170724430

GI number:

Start: 72902

End: 75739

Strand: Reverse

Name: Not Available

Synonym: Swoo_0060

Alternate gene names: NA

Gene position: NA

Preceding gene: 170724432

Following gene: 170724427

Centisome position: NA

GC content: NA

Gene sequence:

>2838_bases
ATGGCCGAAAACTCCCTTCTATGGCATGCTAGCGCCACTATCGAAAACAGATCTCGAAACCAAAGCCGAATACTTATTAT
GCCTAAAATTGCTGAAAACCCTTTAGTTCTTGTGGATGGTTCTTCATACCTCTACCGAGCCTATTACGCACCACCACATC
TAACAAATTCAAAAGGGGAAGCGACTGGAGCAGTCTATGGCGTGATCAACATGCTACGCAGCTTACTTAATCAATATAAA
CCAAGTCAGATGGCTGTGGTATTCGATGCAAAAGGTAAAACTTTCCGTAATGATATGTACGAAGAGTACAAGGCACAGCG
TCCACCTATGCCAGATGATCTTCGCACCCAAATAGAGCCACTGCATAATATTATTCGCGCATTAGGTTTACCTCTTGTCT
GTATTCCCGGCGTCGAAGCCGACGATGTGATAGGCACGATTGCGACACAAGCCAGCAAAGAGGGACGCGCCGTCCTAATC
AGCACTGGTGATAAGGATATGGCTCAGCTGGTCGATGATAATGTCACACTTATCAACACCATGACCAATACCATTATGGG
ACCGGAAGAGGTGACTGAAAAGTTTGGTGTAGGGCCTGAGTTGATTATTGATCTGCTAGCACTGCAGGGCGATAAGGCAG
ATAACATTCCAGGTCTTCCAGGTGTTGGTGAGAAAACAGCAGTGGCTATGCTAACAGGGGCGGGTAGCGTCGAGCAGATC
TTAGCGGCTCCAGAAAAGATACCGGCTTTAGGCTTTAGAGGTTCTAAAACCATGCCTGCCAAACTCGCCGAACATGGTGA
GATGCTTAAGTTATCCTACGAGTTAGCGACCATTAAACTCGATGTAGAGATGGAGCAAGACTGGAAAGAGTTAGTCATTG
CACCAGCGAATAAAGATGATCTGGTGAAATACTATGGCGAGATGGAATTTAAGCGCTGGTTAGCCGAAGTCTTAGACAAT
AAAGGCAGCTCAGCTCAAAGCTCAGATAACAGTGCAGATGAAGAGGAGGTTGTTCCACAGGCTATCGACGCCGAATATGA
GACAATTCTGACTCATGAAGCTTTGGACAAATGGATCGAACAACTCACCAAAGCAGATCTCATTGCTATCGACACTGAGA
CCACCAGCCTAGATTACATGACAGCTAAGCTTGTGGGGATCTCGTTTGCTGTAGAGGTTGGCAAAGCCGCTTATCTCCCA
TTAGCACACGATTACCTCGATGCTCCTGAGCAACTGGATTTCGATGAGGCTATCGCCAAGCTTAAGCCTCTACTTGAAGA
TCCCAAGCTTAAAAAAGTGGGACAAAACCTTAAATATGACATCAGCATCTTTGCCAATGTCGGCATCAAGCTACAAGGTG
TTGCCTTCGATACCATGCTCGAGTCCTACGTATTTAACTCGGTAGCTTCAAAGCACAATATGGATGATCTGGCACTTAAA
TACCTAGGTCATAAAAATATTAGTTTCGAAGAGATCGCCGGGAAAGGCGCTAAGCAGCTCACCTTTAATCAGATCGATCT
CGAAACAGCTGCCCCTTATGCCGCAGAAGATGCCGACATCACCCTTAGATTACATCAACATCTATGGGCAAGATTAGAGA
AAGAACCAAAGCTTGCTTCAGTATTTACTGATATCGAACTGCCACTGGTTCAAGTACTCTCAAAGATCGAACGCCAAGGC
GTACTTATCGACAGCATGATGCTAGGTCAGCAAAGCCAAGAGATCGCTATCTCTATCGATAAGCTAGAGCAAGATGCTTT
CGAAATAGCTGGAGAAACCTTCAATCTAAGTTCACCTAAGCAGTTACAAGCACTCTTTTTCGAGAAGCTTGGCTACCCAG
TGATTAAGAAGACCCCCAAGGGAGCCCCTTCAACCGCCGAAGAGGTGTTGGTCGAGCTTGCTCTAGATTACCCATTGCCT
AAGATAATCTTGCAACACAGAAGCTTAGCGAAGCTTAAAAGCACTTACACTGACAAGCTTCCCCTAATGGTTAATGCTCA
ATCTGGCCGAGTACACACCAGTTATCACCAAGCTAATGCCGCAACGGGTCGTTTATCTTCCAGCGAACCTAATCTGCAAA
ATATCCCGATCCGAACCGAAGAGGGACGCCGCATACGCCATGCCTTTATTGCTCAAGAGGGTAAAAAAGTGCTGGCAGCC
GATTACTCTCAAATCGAGCTACGGATCATGGCTCATCTGTCACAAGACAAGGGCTTACTCACCGCTTTTGCTGAAGGTAA
AGATATTCATAAAGCCACGGCAGCAGAGGTATTTGGTGTTGATTTCAGTGAGGTCACCACAGAGCAGCGCCGCCGTGCTA
AGGCCGTTAACTTCGGCTTAATCTACGGCATGTCTGCATTTGGTCTTGCTAGGCAGCTTGATATTCCTCGCGGTGAAGCG
CAAAAGTATATCGACACTTACTTCGATCGCTACCCAGGTGTGCTCAAGTATATGGAAGACACCAGAGCAGAAGCCGCTGA
TCTTGGTTACGTCTCGACTCTTTATGGCCGCAGACTCTATCTACCTGCGATTAAAGACAGAAACGCCATGCGCAGACAAG
CCGCCGAGCGCGCCGCAATTAACGCGCCTATGCAAGGAACAGCCGCTGATATTATTAAGAAGGCAATGATCAATATTGCT
AGCTGGATCGAATCTGAGACCCATGGTGAGATCACTATGATCATGCAGGTACACGATGAATTGGTATTTGAGGTCGATAG
TGATAAAGCTGAAGCATTAAAAGAGCAGATATGTAAGATGATGGCCGATGCAGTTAGCTTAGATGTCGAACTACTCGCCG
AAGGCGGAATAGGCGACAACTGGGAGCAAGCTCACTAA

Upstream 100 bases:

>100_bases
ATAAGCTTAGCTACCACTCAAATTGAATGAGTTCGTAACTTTCACTCTTGCTGTTTTTTTTAACACACAGACTTATCCAC
AGGCTGTAGGTTAAATTATC

Downstream 100 bases:

>100_bases
CGCCTCTGCAGTAAGTAAAAGTAATCAATAAAAAGCCTCTACTTCTTAGAGGCTTTTTTTGTTTTTGTGTCTTGTCCTGA
AATGTGTTTACACATTTAGG

Product: DNA polymerase I

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>945_residues
MAENSLLWHASATIENRSRNQSRILIMPKIAENPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVINMLRSLLNQYK
PSQMAVVFDAKGKTFRNDMYEEYKAQRPPMPDDLRTQIEPLHNIIRALGLPLVCIPGVEADDVIGTIATQASKEGRAVLI
STGDKDMAQLVDDNVTLINTMTNTIMGPEEVTEKFGVGPELIIDLLALQGDKADNIPGLPGVGEKTAVAMLTGAGSVEQI
LAAPEKIPALGFRGSKTMPAKLAEHGEMLKLSYELATIKLDVEMEQDWKELVIAPANKDDLVKYYGEMEFKRWLAEVLDN
KGSSAQSSDNSADEEEVVPQAIDAEYETILTHEALDKWIEQLTKADLIAIDTETTSLDYMTAKLVGISFAVEVGKAAYLP
LAHDYLDAPEQLDFDEAIAKLKPLLEDPKLKKVGQNLKYDISIFANVGIKLQGVAFDTMLESYVFNSVASKHNMDDLALK
YLGHKNISFEEIAGKGAKQLTFNQIDLETAAPYAAEDADITLRLHQHLWARLEKEPKLASVFTDIELPLVQVLSKIERQG
VLIDSMMLGQQSQEIAISIDKLEQDAFEIAGETFNLSSPKQLQALFFEKLGYPVIKKTPKGAPSTAEEVLVELALDYPLP
KIILQHRSLAKLKSTYTDKLPLMVNAQSGRVHTSYHQANAATGRLSSSEPNLQNIPIRTEEGRRIRHAFIAQEGKKVLAA
DYSQIELRIMAHLSQDKGLLTAFAEGKDIHKATAAEVFGVDFSEVTTEQRRRAKAVNFGLIYGMSAFGLARQLDIPRGEA
QKYIDTYFDRYPGVLKYMEDTRAEAADLGYVSTLYGRRLYLPAIKDRNAMRRQAAERAAINAPMQGTAADIIKKAMINIA
SWIESETHGEITMIMQVHDELVFEVDSDKAEALKEQICKMMADAVSLDVELLAEGGIGDNWEQAH

Sequences:
NA

Specific function: NA

COG id: COG0749

COG function: function code L; DNA polymerase I - 3'-5' exonuclease and polymerase domains

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA