| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is stfQ [C]
Identifier: 170752044
GI number: 170752044
Start: 6004557
End: 6005801
Strand: Reverse
Name: stfQ [C]
Synonym: Mrad2831_5676
Alternate gene names: 170752044
Gene position: 6005801-6004557 (Counterclockwise)
Preceding gene: 170752045
Following gene: 170752043
Centisome position: 98.81
GC content: 70.68
Gene sequence:
>1245_bases ATGCCCGGCGTCATCAACTGGGACGTCGCGCCCTCGGGCAACGACGTCTCGGATCCCCCGATCCTGTTCAACGAAGGGCA GCCGGCCAAGACGATCAACGACGCGATGCGGGCGCTCATGGCCTCCGTCGCGCTGTGGCTGGTCGACAACTCCGGGGTGA ACCAGGCCTTCGGGTCGGACGCCTACACCGTCATCACCCAGCAGGGTGTGTCCGCGAAGGCCGCGGGCCGGGCGCACACG CTCAAGTTCCGCACGACCACGACCAACCTCAACCCGTGCACGCTCGCGGCCGACAACAACGCGCCCAAGCCGTGGCTGCG CTGGGACGGGACGCAGTTCGGGCCGGGCGACATCGGCCAGAACGTCGTGTGGTCGGTGGTCTACGACCCGGTCGCGCAGG TCTACCGCACCCTGTCGCCCACCACCGAGCAGGCCGGCGCGATCAAGGCCTTCGCCGGGCCCAACGTGCCCTCGGGCTGG GAGATCTGCGACGGCCGTGCGGTCTCGCGCACCGCCTACGCCGCCCTGTTCGCCACGATCAGCACGGGATGGGGCAACGG CGACGGCTTCACGACCTTCAACCTGCCCGATGCGCGCGGGCGCACCCTGTTCGGCGCCAATCGCGGCACCGGCCGGCTCA CCGCGGCGGGCGGCCTCGACGGCTCGCTCGGCAACATGGGCGGCGCCGACCAGGTGGTGATGCTGGCCCCGCAGATGCCG AGCCACATCCACACCTCGACCATGTCGCCGGCCGGGTTCTTCGAGCCCGAGATCCAGAAGGCCGGCGCGCACGACCACGG CGGCACGAAGGTCGGCGGCGACCACGCGCATTCCGGCACGACCGGGCTCAGCGGCACCCACACCCACGGCGGCACGACCG ACACGAGCGGCGATCACGCCCACGTCGTGCAGTACGGCTACGGCCTCGTCAGCACCCAGACGCCGAACAACGCCCAGGTG GTCACCGGCATCAATCTCGGCTCGCAGGGCAACGGCCAGACGACGCAGAGCGGGCCGCACCAGCACACCTTCACGACCGG CCAGGGCGGCAACCACACGCACGCCTTCTCGACCGATCCCGGCGGTTCGCACGCGCACGAGATCCCGGTCGACGGCGACC ACACCCACACGATCGATCCGACCCCGAACCACGTCCACACGCTGGTGATCGACGCGGCCGGTTCCGGCGCCCCGCATCCG AACGTGCCCCCGGGGGCCGTCGTGATCTGGGCCATCAAGACCTAA
Upstream 100 bases:
>100_bases CCCGCTGCCGCCGCACCGCCGGCAGGCGCCCGGCTTCGACGCGCAGCGGTTCTTCGCGCTGCTGCCCGGCGCCACGACCC GCTAACCTGAGGACGGCTCT
Downstream 100 bases:
>100_bases CCTTCGGAGAACACCGTCATGGGTGTCTGGAACTGGTCGCTGTCTGCGGCCCGTAATGCGCTGTCCGATGCCCTGATCCA GGCCATCGACGGAGCCTCGG
Product: tail collar domain-containing protein
Products: NA
Alternate protein names: Phage Tail Fiber Protein; Tail Collar Domain Protein; 35 KDa Protein; Tail Collar Domain-Containing Protein; Phage Tail Collar Domain Family; Phage Tail Collar Domain; Microcystin Dependent Protein; Tail Fiber Protein; Phage Tail Protein; Phage Tail Collar Domain Superfamily
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MPGVINWDVAPSGNDVSDPPILFNEGQPAKTINDAMRALMASVALWLVDNSGVNQAFGSDAYTVITQQGVSAKAAGRAHT LKFRTTTTNLNPCTLAADNNAPKPWLRWDGTQFGPGDIGQNVVWSVVYDPVAQVYRTLSPTTEQAGAIKAFAGPNVPSGW EICDGRAVSRTAYAALFATISTGWGNGDGFTTFNLPDARGRTLFGANRGTGRLTAAGGLDGSLGNMGGADQVVMLAPQMP SHIHTSTMSPAGFFEPEIQKAGAHDHGGTKVGGDHAHSGTTGLSGTHTHGGTTDTSGDHAHVVQYGYGLVSTQTPNNAQV VTGINLGSQGNGQTTQSGPHQHTFTTGQGGNHTHAFSTDPGGSHAHEIPVDGDHTHTIDPTPNHVHTLVIDAAGSGAPHP NVPPGAVVIWAIKT
Sequences:
>Translated_414_residues MPGVINWDVAPSGNDVSDPPILFNEGQPAKTINDAMRALMASVALWLVDNSGVNQAFGSDAYTVITQQGVSAKAAGRAHT LKFRTTTTNLNPCTLAADNNAPKPWLRWDGTQFGPGDIGQNVVWSVVYDPVAQVYRTLSPTTEQAGAIKAFAGPNVPSGW EICDGRAVSRTAYAALFATISTGWGNGDGFTTFNLPDARGRTLFGANRGTGRLTAAGGLDGSLGNMGGADQVVMLAPQMP SHIHTSTMSPAGFFEPEIQKAGAHDHGGTKVGGDHAHSGTTGLSGTHTHGGTTDTSGDHAHVVQYGYGLVSTQTPNNAQV VTGINLGSQGNGQTTQSGPHQHTFTTGQGGNHTHAFSTDPGGSHAHEIPVDGDHTHTIDPTPNHVHTLVIDAAGSGAPHP NVPPGAVVIWAIKT >Mature_413_residues PGVINWDVAPSGNDVSDPPILFNEGQPAKTINDAMRALMASVALWLVDNSGVNQAFGSDAYTVITQQGVSAKAAGRAHTL KFRTTTTNLNPCTLAADNNAPKPWLRWDGTQFGPGDIGQNVVWSVVYDPVAQVYRTLSPTTEQAGAIKAFAGPNVPSGWE ICDGRAVSRTAYAALFATISTGWGNGDGFTTFNLPDARGRTLFGANRGTGRLTAAGGLDGSLGNMGGADQVVMLAPQMPS HIHTSTMSPAGFFEPEIQKAGAHDHGGTKVGGDHAHSGTTGLSGTHTHGGTTDTSGDHAHVVQYGYGLVSTQTPNNAQVV TGINLGSQGNGQTTQSGPHQHTFTTGQGGNHTHAFSTDPGGSHAHEIPVDGDHTHTIDPTPNHVHTLVIDAAGSGAPHPN VPPGAVVIWAIKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42768; Mature: 42637
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGVINWDVAPSGNDVSDPPILFNEGQPAKTINDAMRALMASVALWLVDNSGVNQAFGSD CCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHEEEEEEECCCCCHHCCCC AYTVITQQGVSAKAAGRAHTLKFRTTTTNLNPCTLAADNNAPKPWLRWDGTQFGPGDIGQ EEEEEEECCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCEEECCCCCCCCCCCC NVVWSVVYDPVAQVYRTLSPTTEQAGAIKAFAGPNVPSGWEICDGRAVSRTAYAALFATI HHEEHHHHHHHHHHHHHCCCCCHHCCCEEEECCCCCCCCCEECCCCCHHHHHHHHHEEHH STGWGNGDGFTTFNLPDARGRTLFGANRGTGRLTAAGGLDGSLGNMGGADQVVMLAPQMP CCCCCCCCCEEEECCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCC SHIHTSTMSPAGFFEPEIQKAGAHDHGGTKVGGDHAHSGTTGLSGTHTHGGTTDTSGDHA CCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE HVVQYGYGLVSTQTPNNAQVVTGINLGSQGNGQTTQSGPHQHTFTTGQGGNHTHAFSTDP EEEEECCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCCC GGSHAHEIPVDGDHTHTIDPTPNHVHTLVIDAAGSGAPHPNVPPGAVVIWAIKT CCCCCEECCCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure PGVINWDVAPSGNDVSDPPILFNEGQPAKTINDAMRALMASVALWLVDNSGVNQAFGSD CCEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHEEEEEEECCCCCHHCCCC AYTVITQQGVSAKAAGRAHTLKFRTTTTNLNPCTLAADNNAPKPWLRWDGTQFGPGDIGQ EEEEEEECCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCEEECCCCCCCCCCCC NVVWSVVYDPVAQVYRTLSPTTEQAGAIKAFAGPNVPSGWEICDGRAVSRTAYAALFATI HHEEHHHHHHHHHHHHHCCCCCHHCCCEEEECCCCCCCCCEECCCCCHHHHHHHHHEEHH STGWGNGDGFTTFNLPDARGRTLFGANRGTGRLTAAGGLDGSLGNMGGADQVVMLAPQMP CCCCCCCCCEEEECCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCC SHIHTSTMSPAGFFEPEIQKAGAHDHGGTKVGGDHAHSGTTGLSGTHTHGGTTDTSGDHA CCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE HVVQYGYGLVSTQTPNNAQVVTGINLGSQGNGQTTQSGPHQHTFTTGQGGNHTHAFSTDP EEEEECCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCCC GGSHAHEIPVDGDHTHTIDPTPNHVHTLVIDAAGSGAPHPNVPPGAVVIWAIKT CCCCCEECCCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA