| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170752031
Identifier: 170752031
GI number: 170752031
Start: 5995056
End: 5996435
Strand: Reverse
Name: 170752031
Synonym: Mrad2831_5663
Alternate gene names: NA
Gene position: 5996435-5995056 (Counterclockwise)
Preceding gene: 170752032
Following gene: 170752030
Centisome position: 98.66
GC content: 73.62
Gene sequence:
>1380_bases ATGTCGATTGTTCTCCACGGCGACGCCCCCGCATACGGGGCGGCCGCCACGCGGCGACTGTCCCGCGACGCCGTCTATCG GGCCGTCTGGCGGTGGCACTTCTACGCGGGCCTGCTGTGCCTTCCGTTCCTGATCAGCCTCTCGGCCACCGGCGCGCTCT ACCTGTTCAAGGACGAGATCAACGGCAGCCTGTTCGCGTACCGGACCCGGGTCGCGCCGAGCGAGACGGCGCCGATGGGT CCGGACCGGCTGATCTTCAACGCGCTGCAGGCCGTGCCGGACGCCGCGCCCGTCACCTACACCGACCCGGCCTCGCCGGA CGCCGCGGCACGCGTCACCCTCGCTTCGGGCGAGCGCCGGATCCACGTCTACCTGAATCCGTATACCGGCGACGTGCTCG ACCGGGTCGACCGGGACCGCGAGCTCATGGCGGTGGTCCGCGGGCTGCACAGCCTCGTGCTGGTCGGCCCCCTGGCGAAC GCCGTCATCGAGATCGTCGCGGGCTTCGCGATCATCCTGGTGGTGACGGGCGCGTACCTGTGGTGGCCCCGCGGCCGGAT GGGCGGCGTCGTGACCCTGCGCGCCGGCCCGCGCCGGCGCGTGTGGTGGCGCGACCTTCACGCCGTCACCGGGTTCGTCG CCGGCGGCGGGCTGCTCTTCCTGGCGCTGACCGGCCTGCCCTGGTCGATCTGGTGGGGACAGGAGCTGCGCGCGTGGTCC AACGCCGCCGGCCTCGGCCAGCCGGCCGCGCTCTGGGCGAACCGGCCGGTCTCGACGGTGCCTCTACGCGACCGGCTGGA AGATGCCGGCTGGACTCTGCAGGACGCGCCCGTGCCGCGCTCGGCGCCGGCCGCCGCGGCCGCGAGCGTCGGCATCGACG ACGCCGTGGCGATCCTCCGAAGTCTGGGAATGCCCCGCGGCTTCGAGCTGGCGCTGCCCGTCGGCGCGGACGGCGTCTAC GCCGCCGCAATCTACCCGCGCGACGTCACGCGGCAGCGGGTCCTGACCCTCGACCAGTATTCCGGCCGCCCGCTGGTGGA CGTCCGCTTCGGCGATCTCGGACCCGTCGGCCGGGCGATTCAGTACGGGATCGGCATCCACAAGGGCGAGCACTGGGGCC GCGCGAACCAGTTCGCGATGCTGGGCTTCTGCCTCGCCACCATCCTGCTCGCCGTCACCGCCGGAACGATGTGGTGGAAG CGGCGCCCGGCCGGCGGCCTCGGCGTGCCGCCCTGGCCGCGCGACCGGCGGGTGGCCGCGACGGTGACCGTGATCATCCT CGGGCTCGGGGCGCTCTTCCCGCTGACCGGGCTCGCCATCGCCGCCATGATCGGCTTCGACCTCGCCGCGGGCCGGCTCC GAAGGCGGTGGGCGCACTGA
Upstream 100 bases:
>100_bases GATCCCGACGACCGGGCCGCCGGCCTCGACCGGCACCGCGCGAGGTCCACCGGAAGCCTGACGATCCCGCTCCCGATCGT TCAGGCCCGGACCTCCCATC
Downstream 100 bases:
>100_bases TCCGGTACGAGCGGGCGCCGTGCCCGTGCACAAGCCTCCGCGCCTGAGACGCGGGCGTCCGGGTCTTCCGGGCGCGGTGC TGATCGTGCTCGCGCTCTGG
Product: PepSY-associated TM helix domain-containing protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix Family; Sulfite Reductase; Iron-Regulated Membrane Protein; Peptidase; Integral Membrane Protein; PepSY-Associated Membrane Protein; PepSY-Associated TM Helix Domain-Containing Protein; PepSY-Associated TM Helix Containing Protein; PepSY-Associated TM Helix; Pepsy-Associated Tm Helix Domain Protein; Outer Membrane Protein; PepSY Amd Peptidase M4 Protein; M4 Family Peptidase; Sulfite Reductase Flavoprotein Subunit Alpha; Transmembrane Transporter
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MSIVLHGDAPAYGAAATRRLSRDAVYRAVWRWHFYAGLLCLPFLISLSATGALYLFKDEINGSLFAYRTRVAPSETAPMG PDRLIFNALQAVPDAAPVTYTDPASPDAAARVTLASGERRIHVYLNPYTGDVLDRVDRDRELMAVVRGLHSLVLVGPLAN AVIEIVAGFAIILVVTGAYLWWPRGRMGGVVTLRAGPRRRVWWRDLHAVTGFVAGGGLLFLALTGLPWSIWWGQELRAWS NAAGLGQPAALWANRPVSTVPLRDRLEDAGWTLQDAPVPRSAPAAAAASVGIDDAVAILRSLGMPRGFELALPVGADGVY AAAIYPRDVTRQRVLTLDQYSGRPLVDVRFGDLGPVGRAIQYGIGIHKGEHWGRANQFAMLGFCLATILLAVTAGTMWWK RRPAGGLGVPPWPRDRRVAATVTVIILGLGALFPLTGLAIAAMIGFDLAAGRLRRRWAH
Sequences:
>Translated_459_residues MSIVLHGDAPAYGAAATRRLSRDAVYRAVWRWHFYAGLLCLPFLISLSATGALYLFKDEINGSLFAYRTRVAPSETAPMG PDRLIFNALQAVPDAAPVTYTDPASPDAAARVTLASGERRIHVYLNPYTGDVLDRVDRDRELMAVVRGLHSLVLVGPLAN AVIEIVAGFAIILVVTGAYLWWPRGRMGGVVTLRAGPRRRVWWRDLHAVTGFVAGGGLLFLALTGLPWSIWWGQELRAWS NAAGLGQPAALWANRPVSTVPLRDRLEDAGWTLQDAPVPRSAPAAAAASVGIDDAVAILRSLGMPRGFELALPVGADGVY AAAIYPRDVTRQRVLTLDQYSGRPLVDVRFGDLGPVGRAIQYGIGIHKGEHWGRANQFAMLGFCLATILLAVTAGTMWWK RRPAGGLGVPPWPRDRRVAATVTVIILGLGALFPLTGLAIAAMIGFDLAAGRLRRRWAH >Mature_458_residues SIVLHGDAPAYGAAATRRLSRDAVYRAVWRWHFYAGLLCLPFLISLSATGALYLFKDEINGSLFAYRTRVAPSETAPMGP DRLIFNALQAVPDAAPVTYTDPASPDAAARVTLASGERRIHVYLNPYTGDVLDRVDRDRELMAVVRGLHSLVLVGPLANA VIEIVAGFAIILVVTGAYLWWPRGRMGGVVTLRAGPRRRVWWRDLHAVTGFVAGGGLLFLALTGLPWSIWWGQELRAWSN AAGLGQPAALWANRPVSTVPLRDRLEDAGWTLQDAPVPRSAPAAAAASVGIDDAVAILRSLGMPRGFELALPVGADGVYA AAIYPRDVTRQRVLTLDQYSGRPLVDVRFGDLGPVGRAIQYGIGIHKGEHWGRANQFAMLGFCLATILLAVTAGTMWWKR RPAGGLGVPPWPRDRRVAATVTVIILGLGALFPLTGLAIAAMIGFDLAAGRLRRRWAH
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49619; Mature: 49488
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVLHGDAPAYGAAATRRLSRDAVYRAVWRWHFYAGLLCLPFLISLSATGALYLFKDEI CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC NGSLFAYRTRVAPSETAPMGPDRLIFNALQAVPDAAPVTYTDPASPDAAARVTLASGERR CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEECCCEE IHVYLNPYTGDVLDRVDRDRELMAVVRGLHSLVLVGPLANAVIEIVAGFAIILVVTGAYL EEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WWPRGRMGGVVTLRAGPRRRVWWRDLHAVTGFVAGGGLLFLALTGLPWSIWWGQELRAWS CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHCCCEEEEECHHHHHHH NAAGLGQPAALWANRPVSTVPLRDRLEDAGWTLQDAPVPRSAPAAAAASVGIDDAVAILR CCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCHHHHHCCCHHHHHHHH SLGMPRGFELALPVGADGVYAAAIYPRDVTRQRVLTLDQYSGRPLVDVRFGDLGPVGRAI HCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHEEEECCCCCEEEEEECCCCCCHHHHH QYGIGIHKGEHWGRANQFAMLGFCLATILLAVTAGTMWWKRRPAGGLGVPPWPRDRRVAA HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH TVTVIILGLGALFPLTGLAIAAMIGFDLAAGRLRRRWAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SIVLHGDAPAYGAAATRRLSRDAVYRAVWRWHFYAGLLCLPFLISLSATGALYLFKDEI EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC NGSLFAYRTRVAPSETAPMGPDRLIFNALQAVPDAAPVTYTDPASPDAAARVTLASGERR CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEECCCEE IHVYLNPYTGDVLDRVDRDRELMAVVRGLHSLVLVGPLANAVIEIVAGFAIILVVTGAYL EEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WWPRGRMGGVVTLRAGPRRRVWWRDLHAVTGFVAGGGLLFLALTGLPWSIWWGQELRAWS CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHCCCEEEEECHHHHHHH NAAGLGQPAALWANRPVSTVPLRDRLEDAGWTLQDAPVPRSAPAAAAASVGIDDAVAILR CCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCHHHHHCCCHHHHHHHH SLGMPRGFELALPVGADGVYAAAIYPRDVTRQRVLTLDQYSGRPLVDVRFGDLGPVGRAI HCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHEEEECCCCCEEEEEECCCCCCHHHHH QYGIGIHKGEHWGRANQFAMLGFCLATILLAVTAGTMWWKRRPAGGLGVPPWPRDRRVAA HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH TVTVIILGLGALFPLTGLAIAAMIGFDLAAGRLRRRWAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA