| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ctrA [H]
Identifier: 170751941
GI number: 170751941
Start: 5892551
End: 5893252
Strand: Reverse
Name: ctrA [H]
Synonym: Mrad2831_5573
Alternate gene names: 170751941
Gene position: 5893252-5892551 (Counterclockwise)
Preceding gene: 170751945
Following gene: 170751938
Centisome position: 96.96
GC content: 62.96
Gene sequence:
>702_bases ATGCGGGTACTTTTGATCGAGGACGACAGCGCGACCGCGCAGAGCATCGAGCTGATGCTCAAGTCCGAGAACTTCAACAC CTACACCACCGACCTCGGGGAAGAGGGTGTCGATCTCGGCAAGCTGTACGACTACGACATCATCCTCCTCGATCTGAACC TGCCCGATATGTCGGGCTACGAGGTGCTCCGCTCGCTGCGCGTGGCGAAGGTGAAGACCCCGATCCTGATCCTGTCCGGC ATGGCCGGCATCGAGGACAAGGTGAAGGGCCTCGGCTTCGGCGCCGACGACTACCTCACCAAGCCGTTCCACAAGGACGA GCTGGTGGCGCGCATCCACGCCATCGTGCGCCGCTCGAAGGGCCACGCCCAGTCGGTCATCACCACCGGCGACCTGATCG TGAACCTCGATCAGAAGACCGTCGAGGTCGGCGGCGCCCGGGTGCACCTCACCGGCAAGGAGTACCAGATGCTGGAACTC CTCTCGCTCCGGAAGGGCACGACCCTCACCAAGGAGATGTTCCTCAACCATCTCTACGGCGGCATGGACGAGCCCGAGTT GAAGATCATCGACGTCTTCATCTGCAAGCTGCGCAAGAAGCTCGCGAACGCCAGCCAGGGCAAGAACTACATCGAGACCG TCTGGGGCCGCGGCTACGTGCTGCGCGAGCCGATGGACGGCGAGGAGCGCATGGCGGTCTGA
Upstream 100 bases:
>100_bases CCACGTCAAGAGCGACGGAGCGCCCGTCCACAGGCCGGTGGCGGGCGAAGGCTGGGACGTGTCTGCGCGCTGATGCGGCC GGCGGGGCTGGGGACCGACG
Downstream 100 bases:
>100_bases TCCGCCGGTCGCACCGTCCCGTGAAAAACCCCGCGCGGTCCGGCCGCGCGGGGTTTTCGCGTTCCGGCGGTGTCCGAAGC CCTCACCGCGTCCCGGTGGC
Product: two component transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MRVLLIEDDSATAQSIELMLKSENFNTYTTDLGEEGVDLGKLYDYDIILLDLNLPDMSGYEVLRSLRVAKVKTPILILSG MAGIEDKVKGLGFGADDYLTKPFHKDELVARIHAIVRRSKGHAQSVITTGDLIVNLDQKTVEVGGARVHLTGKEYQMLEL LSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKKLANASQGKNYIETVWGRGYVLREPMDGEERMAV
Sequences:
>Translated_233_residues MRVLLIEDDSATAQSIELMLKSENFNTYTTDLGEEGVDLGKLYDYDIILLDLNLPDMSGYEVLRSLRVAKVKTPILILSG MAGIEDKVKGLGFGADDYLTKPFHKDELVARIHAIVRRSKGHAQSVITTGDLIVNLDQKTVEVGGARVHLTGKEYQMLEL LSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKKLANASQGKNYIETVWGRGYVLREPMDGEERMAV >Mature_233_residues MRVLLIEDDSATAQSIELMLKSENFNTYTTDLGEEGVDLGKLYDYDIILLDLNLPDMSGYEVLRSLRVAKVKTPILILSG MAGIEDKVKGLGFGADDYLTKPFHKDELVARIHAIVRRSKGHAQSVITTGDLIVNLDQKTVEVGGARVHLTGKEYQMLEL LSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKKLANASQGKNYIETVWGRGYVLREPMDGEERMAV
Specific function: Essential protein that plays a role in the control of cell division, possibly through the transcriptional regulation of ccrM, rpoD, pleC, minC and ftsZ genes [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790552, Length=224, Percent_Identity=36.6071428571429, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1786784, Length=229, Percent_Identity=36.6812227074236, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=34.5291479820628, Blast_Score=131, Evalue=4e-32, Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=33.0316742081448, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=33.6363636363636, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=32.0175438596491, Blast_Score=110, Evalue=7e-26, Organism=Escherichia coli, GI1786911, Length=219, Percent_Identity=30.1369863013699, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1786599, Length=221, Percent_Identity=30.7692307692308, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=29.0748898678414, Blast_Score=104, Evalue=4e-24, Organism=Escherichia coli, GI1788394, Length=220, Percent_Identity=30.4545454545455, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=29.2792792792793, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=29.9559471365639, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=25.1101321585903, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=28.9719626168224, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1790437, Length=160, Percent_Identity=24.375, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=25.1063829787234, Blast_Score=64, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 26107; Mature: 26107
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLLIEDDSATAQSIELMLKSENFNTYTTDLGEEGVDLGKLYDYDIILLDLNLPDMSGY CEEEEEECCCCHHHHEEEEEECCCCCEEECCCCCCCCCCCEEECEEEEEEEECCCCCCHH EVLRSLRVAKVKTPILILSGMAGIEDKVKGLGFGADDYLTKPFHKDELVARIHAIVRRSK HHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHCC GHAQSVITTGDLIVNLDQKTVEVGGARVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG CCHHHEEEECCEEEECCHHEEEECCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHC GMDEPELKIIDVFICKLRKKLANASQGKNYIETVWGRGYVLREPMDGEERMAV CCCCCCHHHHHHHHHHHHHHHCCHHCCCHHHHHHCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MRVLLIEDDSATAQSIELMLKSENFNTYTTDLGEEGVDLGKLYDYDIILLDLNLPDMSGY CEEEEEECCCCHHHHEEEEEECCCCCEEECCCCCCCCCCCEEECEEEEEEEECCCCCCHH EVLRSLRVAKVKTPILILSGMAGIEDKVKGLGFGADDYLTKPFHKDELVARIHAIVRRSK HHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHCC GHAQSVITTGDLIVNLDQKTVEVGGARVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG CCHHHEEEECCEEEECCHHEEEECCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHC GMDEPELKIIDVFICKLRKKLANASQGKNYIETVWGRGYVLREPMDGEERMAV CCCCCCHHHHHHHHHHHHHHHCCHHCCCHHHHHHCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA