| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yfeW [C]
Identifier: 170751859
GI number: 170751859
Start: 5805166
End: 5806389
Strand: Reverse
Name: yfeW [C]
Synonym: Mrad2831_5491
Alternate gene names: 170751859
Gene position: 5806389-5805166 (Counterclockwise)
Preceding gene: 170751860
Following gene: 170751853
Centisome position: 95.53
GC content: 72.3
Gene sequence:
>1224_bases ATGAGCGCGCTGACCGAGACCGATCCGACGGGTGCCGGGTTCAGCCCGGACGGGCTCGCCCGGATCGTGCCGTGGATGGA CCGCCTCGTCGGCGACGGTCGGCTGGCCGGCCTGTCGGTCACCGTGGCGCGGCGCGGCCGCATCGCCTTCGCGCGTGCCT GCGGGCAGGCCGACCTCGCCCGGGCGACGCCGTTCACCCTCGACACGGTGACCCGGATCTACTCGATGACCAAGCCGCTG ACCTCGGTCGCGGTGATGCAGCTCTACGAGCAGGGCCTGTTCCAGCTCGACGATCCGATCTCCCGGGTCCTGCCCGCGTT CGCCGAGATGCGCGTCGCCGTGGGCGGCAACCGGGCGAAGCTCGAGACCGAGCCCGCCCGCCGGGCGATCACCGTGCGGG ACCTGCTGACCCACACGGCCGGGCTGACCTACGGCTTCATGGAAGCGACCCTGGTCGACGCGCAGTACCGCGAGCAGGGT GTCGACTTCCTGGCGCGCGAGGGCACGCTCGCCGAGATGACCGCGCGGGTGGCGAAGCTGCCGCTCCTCGCCCAGCCGGG CAGCGCCTGGAACTACAGCGTCGCCACCGACGTGCTCGGCCAGTACGTGGCGGCGCTCACCGGCCGCCCCTTCGCCGACC ACCTCCGCGAGGCGGTGATCGGGCCCCTCGGCATGGTCGATACCGATTTCTACGTGCGGCCCGAGCTGATGCCGCGCTTC TGCGCCACCTACGCGTACGATCGCGCGCGGCGGCTGCGCCTGTTCGACGATTCGGTGGAGACGGCCTTCGCGCGCCCGCC CGCGATCGCGTCGGGCGGCGGCGGCCTCGTCTCAACGGCGGCGGATTACCAGCGCTTCTGCCGGATGATCCTCGACCGGG GCACCCTCGACGGCGCGCGCCTCCTGGGCCGCAAGACGGTCGACCTGATGCTGGCGAATCATCTGCCGGGCGATCTCGCC GCGATGGGCACGCCGCGCTTCGCCGAGACCTCCTACACCGGCATCGGTTTCGGTCTGGGCTTCTCGGTGATGCTCGACCC CGCCCGGGCCCAGATCCTCGGCACGCCGGGCGAGGTCGCCTGGGGCGGCCTCGCCTCGACGGCGTTCTGGATCGACCCGG CCGAGGATCTGTCGGTGGTGCTCATGACGCAGCTCGTGCCGTCCTCGGCCCTGCCGATCCGGCGCGAACTGCGCGTCCTG ACCTACGCGGCCCTCGCCGATTGA
Upstream 100 bases:
>100_bases GGCATCGTCGGCCCGTTCAAGGGTGGGGCCGGGACAATGGGCTGGTGATTTCGTTGCCCTCCCCTTCTACGCTTCCGGAC CGCCATCACGAGGAGACCGC
Downstream 100 bases:
>100_bases GGGCCGGCCGCGGGAGGGTTGGCGCCGCTCACTCCTCCTTGGGCGCCTCGGAGGCGGCGGGCTTCTGAGCCGGCTTCGCG CCGGCCTTGGCGGTCGGCTT
Product: beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MSALTETDPTGAGFSPDGLARIVPWMDRLVGDGRLAGLSVTVARRGRIAFARACGQADLARATPFTLDTVTRIYSMTKPL TSVAVMQLYEQGLFQLDDPISRVLPAFAEMRVAVGGNRAKLETEPARRAITVRDLLTHTAGLTYGFMEATLVDAQYREQG VDFLAREGTLAEMTARVAKLPLLAQPGSAWNYSVATDVLGQYVAALTGRPFADHLREAVIGPLGMVDTDFYVRPELMPRF CATYAYDRARRLRLFDDSVETAFARPPAIASGGGGLVSTAADYQRFCRMILDRGTLDGARLLGRKTVDLMLANHLPGDLA AMGTPRFAETSYTGIGFGLGFSVMLDPARAQILGTPGEVAWGGLASTAFWIDPAEDLSVVLMTQLVPSSALPIRRELRVL TYAALAD
Sequences:
>Translated_407_residues MSALTETDPTGAGFSPDGLARIVPWMDRLVGDGRLAGLSVTVARRGRIAFARACGQADLARATPFTLDTVTRIYSMTKPL TSVAVMQLYEQGLFQLDDPISRVLPAFAEMRVAVGGNRAKLETEPARRAITVRDLLTHTAGLTYGFMEATLVDAQYREQG VDFLAREGTLAEMTARVAKLPLLAQPGSAWNYSVATDVLGQYVAALTGRPFADHLREAVIGPLGMVDTDFYVRPELMPRF CATYAYDRARRLRLFDDSVETAFARPPAIASGGGGLVSTAADYQRFCRMILDRGTLDGARLLGRKTVDLMLANHLPGDLA AMGTPRFAETSYTGIGFGLGFSVMLDPARAQILGTPGEVAWGGLASTAFWIDPAEDLSVVLMTQLVPSSALPIRRELRVL TYAALAD >Mature_406_residues SALTETDPTGAGFSPDGLARIVPWMDRLVGDGRLAGLSVTVARRGRIAFARACGQADLARATPFTLDTVTRIYSMTKPLT SVAVMQLYEQGLFQLDDPISRVLPAFAEMRVAVGGNRAKLETEPARRAITVRDLLTHTAGLTYGFMEATLVDAQYREQGV DFLAREGTLAEMTARVAKLPLLAQPGSAWNYSVATDVLGQYVAALTGRPFADHLREAVIGPLGMVDTDFYVRPELMPRFC ATYAYDRARRLRLFDDSVETAFARPPAIASGGGGLVSTAADYQRFCRMILDRGTLDGARLLGRKTVDLMLANHLPGDLAA MGTPRFAETSYTGIGFGLGFSVMLDPARAQILGTPGEVAWGGLASTAFWIDPAEDLSVVLMTQLVPSSALPIRRELRVLT YAALAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082101, Length=412, Percent_Identity=24.0291262135922, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786574, Length=230, Percent_Identity=30, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115533026, Length=374, Percent_Identity=24.0641711229947, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17550934, Length=216, Percent_Identity=27.3148148148148, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 43917; Mature: 43786
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALTETDPTGAGFSPDGLARIVPWMDRLVGDGRLAGLSVTVARRGRIAFARACGQADLA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECEEEEEECCCCCHHHHHCCCCHHH RATPFTLDTVTRIYSMTKPLTSVAVMQLYEQGLFQLDDPISRVLPAFAEMRVAVGGNRAK HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCE LETEPARRAITVRDLLTHTAGLTYGFMEATLVDAQYREQGVDFLAREGTLAEMTARVAKL ECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHC PLLAQPGSAWNYSVATDVLGQYVAALTGRPFADHLREAVIGPLGMVDTDFYVRPELMPRF CCEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEECHHHHHHH CATYAYDRARRLRLFDDSVETAFARPPAIASGGGGLVSTAADYQRFCRMILDRGTLDGAR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH LLGRKTVDLMLANHLPGDLAAMGTPRFAETSYTGIGFGLGFSVMLDPARAQILGTPGEVA HHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEECCCCHHEEECCHHHHEECCCCCCC WGGLASTAFWIDPAEDLSVVLMTQLVPSSALPIRRELRVLTYAALAD CCCHHCCEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SALTETDPTGAGFSPDGLARIVPWMDRLVGDGRLAGLSVTVARRGRIAFARACGQADLA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECEEEEEECCCCCHHHHHCCCCHHH RATPFTLDTVTRIYSMTKPLTSVAVMQLYEQGLFQLDDPISRVLPAFAEMRVAVGGNRAK HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCE LETEPARRAITVRDLLTHTAGLTYGFMEATLVDAQYREQGVDFLAREGTLAEMTARVAKL ECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHC PLLAQPGSAWNYSVATDVLGQYVAALTGRPFADHLREAVIGPLGMVDTDFYVRPELMPRF CCEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEECHHHHHHH CATYAYDRARRLRLFDDSVETAFARPPAIASGGGGLVSTAADYQRFCRMILDRGTLDGAR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH LLGRKTVDLMLANHLPGDLAAMGTPRFAETSYTGIGFGLGFSVMLDPARAQILGTPGEVA HHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEECCCCHHEEECCHHHHEECCCCCCC WGGLASTAFWIDPAEDLSVVLMTQLVPSSALPIRRELRVLTYAALAD CCCHHCCEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]