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The map label for this gene is cpsD [H]

Identifier: 170751851

GI number: 170751851

Start: 5797809

End: 5798450

Strand: Reverse

Name: cpsD [H]

Synonym: Mrad2831_5483

Alternate gene names: 170751851

Gene position: 5798450-5797809 (Counterclockwise)

Preceding gene: 170751852

Following gene: 170751850

Centisome position: 95.4

GC content: 74.77

Gene sequence:

>642_bases
ATGATCGCCGCCGCAGCCGCACCCCGCATCGATCCGGCGATCCTCGAACCGGCACTCGTCCAGCTCACCCGGCACGAGGC
GCGCGTCCGCCGGGTCGGCCTCACCGCGGTCCAGCCCGGCGAGGGCGTGAGCACCCTCGCCCGCGAACTCGCCGGCGCCT
ACGCCCGGCGGGGCCGCAGCGCGGTGCTGATCGAGGCGAACTGGTCGCGCCCGTCGGTGGCGGAGGCCTACGGCCTGACC
GGCCGGCCGGGCTTCGCCGACATCGTCGCCGGCGCGGTGGCGCCGAGCCGCGGCGTCCACGCGGTTGCCGAGAACCTGAG
CGTCGTGCCGGCGGGCAGCGCGTCGGCCATCCGCGAGGCGACCCTCGACGACGGCCGCGTCGAGGATTTCCTCGCGCTGA
TCGACGACCGCTTCGACCTCGCCATCGTGGATTGTGAGCCGATCACCGAGATCGGCGACGCCGCCGCGCTCTCGCCCTTC
GTGGACGGCTTCATCGTGGTGATCGGCGCCGAGCGCACCCGCCGGGCGGTGGCACAGCGCGCCCTGGCCGACCTCAAGGC
CGCCGGCGGTGCGCCGCTCGGCGTCGTCCTCAACCGCACCCGGCGACCGATCCCGAAATGGCTCTACCGATGGCTCGGGT
GA

Upstream 100 bases:

>100_bases
CGGAGATCCTGGCCCAGACCTATCGCAGCGCGTCCGAGGTCGCCCGCTCGCTGCGGGTGCCCGTGCTGGCCGCGGTGCCG
CTGCAGACAGGAGCCGCCGG

Downstream 100 bases:

>100_bases
GCGCGGCCCCCGTCCGCGCGCTGCGGGTCCTGCCGCTGGCCGGGATCGGCTTCGCGGCGGCGGCCGGCGCGATCGCCCTG
AGCGCGGCGCCGCTGAAATT

Product: chromosome partitioning ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MIAAAAAPRIDPAILEPALVQLTRHEARVRRVGLTAVQPGEGVSTLARELAGAYARRGRSAVLIEANWSRPSVAEAYGLT
GRPGFADIVAGAVAPSRGVHAVAENLSVVPAGSASAIREATLDDGRVEDFLALIDDRFDLAIVDCEPITEIGDAAALSPF
VDGFIVVIGAERTRRAVAQRALADLKAAGGAPLGVVLNRTRRPIPKWLYRWLG

Sequences:

>Translated_213_residues
MIAAAAAPRIDPAILEPALVQLTRHEARVRRVGLTAVQPGEGVSTLARELAGAYARRGRSAVLIEANWSRPSVAEAYGLT
GRPGFADIVAGAVAPSRGVHAVAENLSVVPAGSASAIREATLDDGRVEDFLALIDDRFDLAIVDCEPITEIGDAAALSPF
VDGFIVVIGAERTRRAVAQRALADLKAAGGAPLGVVLNRTRRPIPKWLYRWLG
>Mature_213_residues
MIAAAAAPRIDPAILEPALVQLTRHEARVRRVGLTAVQPGEGVSTLARELAGAYARRGRSAVLIEANWSRPSVAEAYGLT
GRPGFADIVAGAVAPSRGVHAVAENLSVVPAGSASAIREATLDDGRVEDFLALIDDRFDLAIVDCEPITEIGDAAALSPF
VDGFIVVIGAERTRRAVAQRALADLKAAGGAPLGVVLNRTRRPIPKWLYRWLG

Specific function: Involved in the regulation of capsular polysaccharide biosynthesis. Autophosphorylation of CpsD attenuates its activity and reduces the level of encapsulation. May be part of a complex that directs the coordinated polymerization and export to the cell sur

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 22415; Mature: 22415

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAAAAAPRIDPAILEPALVQLTRHEARVRRVGLTAVQPGEGVSTLARELAGAYARRGRS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCC
AVLIEANWSRPSVAEAYGLTGRPGFADIVAGAVAPSRGVHAVAENLSVVPAGSASAIREA
EEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHCCEECCCCCHHHHHHH
TLDDGRVEDFLALIDDRFDLAIVDCEPITEIGDAAALSPFVDGFIVVIGAERTRRAVAQR
HCCCCHHHHHHHHHCCCCCEEEECCCCHHHHCCHHHHHHHHCCEEEEEECHHHHHHHHHH
ALADLKAAGGAPLGVVLNRTRRPIPKWLYRWLG
HHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MIAAAAAPRIDPAILEPALVQLTRHEARVRRVGLTAVQPGEGVSTLARELAGAYARRGRS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCC
AVLIEANWSRPSVAEAYGLTGRPGFADIVAGAVAPSRGVHAVAENLSVVPAGSASAIREA
EEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHCCEECCCCCHHHHHHH
TLDDGRVEDFLALIDDRFDLAIVDCEPITEIGDAAALSPFVDGFIVVIGAERTRRAVAQR
HCCCCHHHHHHHHHCCCCCEEEECCCCHHHHCCHHHHHHHHCCEEEEEECHHHHHHHHHH
ALADLKAAGGAPLGVVLNRTRRPIPKWLYRWLG
HHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11179285; 11463916 [H]