| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yibD [C]
Identifier: 170751843
GI number: 170751843
Start: 5789515
End: 5790456
Strand: Reverse
Name: yibD [C]
Synonym: Mrad2831_5475
Alternate gene names: 170751843
Gene position: 5790456-5789515 (Counterclockwise)
Preceding gene: 170751844
Following gene: 170751842
Centisome position: 95.27
GC content: 74.1
Gene sequence:
>942_bases ATGAGCGATGGACCCGTGCTCTCGGTCATCATCCCGACCTACAACCGCGCCGACACGCTGCGTCTGTGCCTGCGGGCCTT CGACCGGCAGGAGACGGAGGCGCCCTTCGAGATCGTCGTCTGCGACGACGGCTCGACCGATCACACCGGGACGGTCGTCA GCCGCGCTGTCGCCACGGGCCGGATCCCCGTGGTGCACCTGCGCCAGGAGAATGCCGGGGCGAACGCCGCCCGCAACCGC GCCATCGCGGCGGCCCGGGGCGAGCGCCTCCTGATCGTCAACGACGACACCATCCCGGTGCCGAGCCTCGTCGAGGCGCA CCGGCTCGCCCACACCCGGCGGGGCGGGCGGGAGACCGCGATCCTCGGCCGGATGACCATCGACCCGGCGCTGCCCTTCT CGCCGTTCTCGGCGCTCCACCACGACGCCTCCTACGACGCCCTGGCGGGCCGCGAGGAGGTCGGCTGGGACGCGTTCCTG ACCTGCAACGTCAGCGTCGACCGGCACTTCCTGGGGGAAGCCGGGGGCTTCGATCCGAAGCTGTTCTGGCACGAGGACAT CGAGCTGGGCGAGCGGCTGGCCCGGCGCGGCATGCGCCTGTTCTACGCCCCCGAGGCGCTGGGCTACCACCACCATCTCC TCGACGAGGCGGCCTATCTGCGCATCGCCGAGCGCGAGGGCGCGGCCCTGGTGCTGTGGTACCGCAAGCGCCCGGACCTC GTGGCCGATCTCGGCCGCCTCGGCCTCGTCGGGCCGCCGCCGCTCGGCGCGGCGGCGCGCCACCGGGTCGCCGACCTCGC CATGCCGCAGGCGCTCCTGCCCGGCTGGCAGATGGCGGCCCGCGCGCTGACGCGGATCAGCCCGGAGGCCGGCCGGACCG TGTGGCGGCGTCTGTTCCAGCGGCGCAAGCGCCTCGCCATCGCCCGGGCGCTCGCGGCATGA
Upstream 100 bases:
>100_bases TGCCCGCCGTCGCGACCCTCGCGACCGCCGTCGCGGGGTGGCTGTGCCTGCGCCGCAACCCGTCCGATCCCCTCCCCCTC CCGCTTCCGGAAGCCTCGTC
Downstream 100 bases:
>100_bases GGTGGCCCCGCACGGTCCTCGGCGGCGCCCTGTCGGCGCTGGTGCTGCCGGTCCTGTCCGCCTGCGGGCCGGCCGACGCG CAGGTGCAGCAGAACATCCT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycoside Hydrolase Family 2 Protein; Glycosyl Transferase Family 2 Protein; Glycosly Transferase; Glycosyl Transferase Group 1/2 Family Protein; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MSDGPVLSVIIPTYNRADTLRLCLRAFDRQETEAPFEIVVCDDGSTDHTGTVVSRAVATGRIPVVHLRQENAGANAARNR AIAAARGERLLIVNDDTIPVPSLVEAHRLAHTRRGGRETAILGRMTIDPALPFSPFSALHHDASYDALAGREEVGWDAFL TCNVSVDRHFLGEAGGFDPKLFWHEDIELGERLARRGMRLFYAPEALGYHHHLLDEAAYLRIAEREGAALVLWYRKRPDL VADLGRLGLVGPPPLGAAARHRVADLAMPQALLPGWQMAARALTRISPEAGRTVWRRLFQRRKRLAIARALAA
Sequences:
>Translated_313_residues MSDGPVLSVIIPTYNRADTLRLCLRAFDRQETEAPFEIVVCDDGSTDHTGTVVSRAVATGRIPVVHLRQENAGANAARNR AIAAARGERLLIVNDDTIPVPSLVEAHRLAHTRRGGRETAILGRMTIDPALPFSPFSALHHDASYDALAGREEVGWDAFL TCNVSVDRHFLGEAGGFDPKLFWHEDIELGERLARRGMRLFYAPEALGYHHHLLDEAAYLRIAEREGAALVLWYRKRPDL VADLGRLGLVGPPPLGAAARHRVADLAMPQALLPGWQMAARALTRISPEAGRTVWRRLFQRRKRLAIARALAA >Mature_312_residues SDGPVLSVIIPTYNRADTLRLCLRAFDRQETEAPFEIVVCDDGSTDHTGTVVSRAVATGRIPVVHLRQENAGANAARNRA IAAARGERLLIVNDDTIPVPSLVEAHRLAHTRRGGRETAILGRMTIDPALPFSPFSALHHDASYDALAGREEVGWDAFLT CNVSVDRHFLGEAGGFDPKLFWHEDIELGERLARRGMRLFYAPEALGYHHHLLDEAAYLRIAEREGAALVLWYRKRPDLV ADLGRLGLVGPPPLGAAARHRVADLAMPQALLPGWQMAARALTRISPEAGRTVWRRLFQRRKRLAIARALAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790044, Length=106, Percent_Identity=37.7358490566038, Blast_Score=68, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.-.-.- [C]
Molecular weight: Translated: 34552; Mature: 34421
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGPVLSVIIPTYNRADTLRLCLRAFDRQETEAPFEIVVCDDGSTDHTGTVVSRAVATG CCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCC RIPVVHLRQENAGANAARNRAIAAARGERLLIVNDDTIPVPSLVEAHRLAHTRRGGRETA CCCEEEEECCCCCCCHHHHCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEE ILGRMTIDPALPFSPFSALHHDASYDALAGREEVGWDAFLTCNVSVDRHFLGEAGGFDPK EEEEEEECCCCCCCHHHHHHCCCCCHHHCCCCCCCCEEEEEEEEEECHHHHCCCCCCCCC LFWHEDIELGERLARRGMRLFYAPEALGYHHHLLDEAAYLRIAEREGAALVLWYRKRPDL EEECCHHHHHHHHHHCCCEEEECCHHHCHHHHHHHHHHHEEEECCCCCEEEEEECCCCCH VADLGRLGLVGPPPLGAAARHRVADLAMPQALLPGWQMAARALTRISPEAGRTVWRRLFQ HHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHH RRKRLAIARALAA HHHHHHHHHHHCC >Mature Secondary Structure SDGPVLSVIIPTYNRADTLRLCLRAFDRQETEAPFEIVVCDDGSTDHTGTVVSRAVATG CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCC RIPVVHLRQENAGANAARNRAIAAARGERLLIVNDDTIPVPSLVEAHRLAHTRRGGRETA CCCEEEEECCCCCCCHHHHCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEE ILGRMTIDPALPFSPFSALHHDASYDALAGREEVGWDAFLTCNVSVDRHFLGEAGGFDPK EEEEEEECCCCCCCHHHHHHCCCCCHHHCCCCCCCCEEEEEEEEEECHHHHCCCCCCCCC LFWHEDIELGERLARRGMRLFYAPEALGYHHHLLDEAAYLRIAEREGAALVLWYRKRPDL EEECCHHHHHHHHHHCCCEEEECCHHHCHHHHHHHHHHHEEEECCCCCEEEEEECCCCCH VADLGRLGLVGPPPLGAAARHRVADLAMPQALLPGWQMAARALTRISPEAGRTVWRRLFQ HHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHH RRKRLAIARALAA HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA