Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is 170751817

Identifier: 170751817

GI number: 170751817

Start: 5756573

End: 5757847

Strand: Reverse

Name: 170751817

Synonym: Mrad2831_5447

Alternate gene names: NA

Gene position: 5757847-5756573 (Counterclockwise)

Preceding gene: 170751819

Following gene: 170751816

Centisome position: 94.74

GC content: 69.8

Gene sequence:

>1275_bases
ATGACGCCGATCAGCCAGCCGATCCTGACCCGCAGCCTCACCGCCGCCCTCGCCGGACTCGGTCTCGGCCTGATGGGATC
CGGCCCGGTCGCCGCGCAGGAGACGCCCGCGACCGCGGCCCCGCCGCCCAGCGTCCAGGTCGATCGCGGCTCGGCCCTCT
ACGGCCGCCCCGAGGGCGGCGCCGCGGCCAAGCTCGCGCCGGTGGCCGGACCGCCGCTGGCGACCGCGGCCGCCAAGCTG
CCGCTCGACAAGCTGACGGTTCCGGACGGCTTCAAGATCGAGGTCTACGCCAGCGGCCTCGCGAATGCCCGCGAAATGAC
CCAGGCGCCGGACGGCACGCTGTACGTGGGCACCCGGACGGTGGGGAAGGTCTACGCCGTGCTGCCGAAGCCGGACGGCG
ACGGGAAGCGCGCGGTGAAGACCATCGCGACGGGCCTGCACCGGCCGAACGGCGTCGCGTACCACGACGGCGCGCTCTAC
GTCGCCGAACTCTCGAAGATCTGGCGCTACGACGACATCGCGAACCATCTCGATGGCGCGGCGAAGCCGACCCTGGTCTA
CGACGACCTTCCGAAGGACGAGGCCCACGGCTGGAAGTTCATCGCCATCGGCCCGGACAACAAGCTCTACGTCCCGGTCG
GCGCGCCGGGCAACATCGTGATGCCGCCGGACACCCACGCGCAGATCAGGCGGATGGACCTCGACGGCAAGAACGCCGAA
GTGATCGCCCGCGGCGTGCGCAACACCGTCGGGTTCGACTGGAACCCGAAGACCAAGCAGCTCTGGTTCACCGATAACGG
CCGCGACTGGGTCTCGGAGGACATCCCGAACGACGAGCTGAACGTGCTCACGGAGCCGGGCAAGCAGCATTTCGGCTATC
CGTACTGCCACCAGGGCACGTTCACGGATCCGGAATACGGCTGGGGCCACGCCTGCTCGGAATTCACCGCGCCGGCGGCG
CTCCTCGGCCCGCACACGGCCTCGCTCGGCCTGCGGTTCTACACCGGAACGCAGTTTCCGGAGGCCTACCGGGACGCGAT
GTTCGTCGCCCGGCACGGCTCGTGGAACCGCACGACCAAGCTCGGCGGCGACGTGGTCGTGGCCAAGCCCGGACCGGACG
GCAAGACCGCCGCGGTGGAGCCGTTCCTGACCGGCTTCCTTCAGGACAACAAGTATGTCGGCCGGCCGGTCGACGTGCTG
GTCGCCAAGGACGGATCGCTGCTCGTTTCCGACGACTACAACGGCGCGATCTACCGCGTCAGCTACGGCCGGTGA

Upstream 100 bases:

>100_bases
CTCCGCGGCGCCCGGCCCGGTCGCGCTCTCCGGCCGACCGTTGAATAAAGAGTGCAGAGCGAGCGGACGGTCCGCGGGGC
CGCCCCCATCGGGAGACATC

Downstream 100 bases:

>100_bases
TGCGCCGCCATCTCCGTTTGATCCGCGGGCTGGTCTATGCCCTCGGCGGGCTGCTGCTCACGGGCGCGACGCGCGCCGCC
CCGGACGCGGCGATGCAGGA

Product: putative membrane-bound dehydrogenase oxidoreductase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MTPISQPILTRSLTAALAGLGLGLMGSGPVAAQETPATAAPPPSVQVDRGSALYGRPEGGAAAKLAPVAGPPLATAAAKL
PLDKLTVPDGFKIEVYASGLANAREMTQAPDGTLYVGTRTVGKVYAVLPKPDGDGKRAVKTIATGLHRPNGVAYHDGALY
VAELSKIWRYDDIANHLDGAAKPTLVYDDLPKDEAHGWKFIAIGPDNKLYVPVGAPGNIVMPPDTHAQIRRMDLDGKNAE
VIARGVRNTVGFDWNPKTKQLWFTDNGRDWVSEDIPNDELNVLTEPGKQHFGYPYCHQGTFTDPEYGWGHACSEFTAPAA
LLGPHTASLGLRFYTGTQFPEAYRDAMFVARHGSWNRTTKLGGDVVVAKPGPDGKTAAVEPFLTGFLQDNKYVGRPVDVL
VAKDGSLLVSDDYNGAIYRVSYGR

Sequences:

>Translated_424_residues
MTPISQPILTRSLTAALAGLGLGLMGSGPVAAQETPATAAPPPSVQVDRGSALYGRPEGGAAAKLAPVAGPPLATAAAKL
PLDKLTVPDGFKIEVYASGLANAREMTQAPDGTLYVGTRTVGKVYAVLPKPDGDGKRAVKTIATGLHRPNGVAYHDGALY
VAELSKIWRYDDIANHLDGAAKPTLVYDDLPKDEAHGWKFIAIGPDNKLYVPVGAPGNIVMPPDTHAQIRRMDLDGKNAE
VIARGVRNTVGFDWNPKTKQLWFTDNGRDWVSEDIPNDELNVLTEPGKQHFGYPYCHQGTFTDPEYGWGHACSEFTAPAA
LLGPHTASLGLRFYTGTQFPEAYRDAMFVARHGSWNRTTKLGGDVVVAKPGPDGKTAAVEPFLTGFLQDNKYVGRPVDVL
VAKDGSLLVSDDYNGAIYRVSYGR
>Mature_423_residues
TPISQPILTRSLTAALAGLGLGLMGSGPVAAQETPATAAPPPSVQVDRGSALYGRPEGGAAAKLAPVAGPPLATAAAKLP
LDKLTVPDGFKIEVYASGLANAREMTQAPDGTLYVGTRTVGKVYAVLPKPDGDGKRAVKTIATGLHRPNGVAYHDGALYV
AELSKIWRYDDIANHLDGAAKPTLVYDDLPKDEAHGWKFIAIGPDNKLYVPVGAPGNIVMPPDTHAQIRRMDLDGKNAEV
IARGVRNTVGFDWNPKTKQLWFTDNGRDWVSEDIPNDELNVLTEPGKQHFGYPYCHQGTFTDPEYGWGHACSEFTAPAAL
LGPHTASLGLRFYTGTQFPEAYRDAMFVARHGSWNRTTKLGGDVVVAKPGPDGKTAAVEPFLTGFLQDNKYVGRPVDVLV
AKDGSLLVSDDYNGAIYRVSYGR

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.liquefaciens L-sorbosone dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 45287; Mature: 45155

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPISQPILTRSLTAALAGLGLGLMGSGPVAAQETPATAAPPPSVQVDRGSALYGRPEGG
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCC
AAAKLAPVAGPPLATAAAKLPLDKLTVPDGFKIEVYASGLANAREMTQAPDGTLYVGTRT
CCEEECCCCCCCHHHHHHHCCHHHCCCCCCCEEEEEECCCCCHHHHHCCCCCEEEEEEEC
VGKVYAVLPKPDGDGKRAVKTIATGLHRPNGVAYHDGALYVAELSKIWRYDDIANHLDGA
CCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHCCCC
AKPTLVYDDLPKDEAHGWKFIAIGPDNKLYVPVGAPGNIVMPPDTHAQIRRMDLDGKNAE
CCCEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEECCCCHHHEEEECCCCCCHH
VIARGVRNTVGFDWNPKTKQLWFTDNGRDWVSEDIPNDELNVLTEPGKQHFGYPYCHQGT
HHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCCCEEEEECCCHHHCCCCCCCCCC
FTDPEYGWGHACSEFTAPAALLGPHTASLGLRFYTGTQFPEAYRDAMFVARHGSWNRTTK
CCCCCCCCCCCHHHHCCCHHHHCCCHHHCEEEEEECCCCHHHHHCEEEEEECCCCCCCEE
LGGDVVVAKPGPDGKTAAVEPFLTGFLQDNKYVGRPVDVLVAKDGSLLVSDDYNGAIYRV
CCCCEEEECCCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCEEEEE
SYGR
ECCC
>Mature Secondary Structure 
TPISQPILTRSLTAALAGLGLGLMGSGPVAAQETPATAAPPPSVQVDRGSALYGRPEGG
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCC
AAAKLAPVAGPPLATAAAKLPLDKLTVPDGFKIEVYASGLANAREMTQAPDGTLYVGTRT
CCEEECCCCCCCHHHHHHHCCHHHCCCCCCCEEEEEECCCCCHHHHHCCCCCEEEEEEEC
VGKVYAVLPKPDGDGKRAVKTIATGLHRPNGVAYHDGALYVAELSKIWRYDDIANHLDGA
CCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHCCCC
AKPTLVYDDLPKDEAHGWKFIAIGPDNKLYVPVGAPGNIVMPPDTHAQIRRMDLDGKNAE
CCCEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEECCCCHHHEEEECCCCCCHH
VIARGVRNTVGFDWNPKTKQLWFTDNGRDWVSEDIPNDELNVLTEPGKQHFGYPYCHQGT
HHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCCCEEEEECCCHHHCCCCCCCCCC
FTDPEYGWGHACSEFTAPAALLGPHTASLGLRFYTGTQFPEAYRDAMFVARHGSWNRTTK
CCCCCCCCCCCHHHHCCCHHHHCCCHHHCEEEEEECCCCHHHHHCEEEEEECCCCCCCEE
LGGDVVVAKPGPDGKTAAVEPFLTGFLQDNKYVGRPVDVLVAKDGSLLVSDDYNGAIYRV
CCCCEEEECCCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCEEEEE
SYGR
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]