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The map label for this gene is ccdA [H]

Identifier: 170751764

GI number: 170751764

Start: 5703274

End: 5703993

Strand: Reverse

Name: ccdA [H]

Synonym: Mrad2831_5394

Alternate gene names: 170751764

Gene position: 5703993-5703274 (Counterclockwise)

Preceding gene: 170751768

Following gene: 170751763

Centisome position: 93.85

GC content: 75.97

Gene sequence:

>720_bases
ATGCTGGGAACGGTGGGATTCGCGTTCCTGGCCGGCCTGCTCTCGGTGCTCTCGCCCTGCGTGCTGCCGCTGATCCCCAT
CGTGCTCGGGACGGCGGCAGCCGAGCATCGCCTCGGTCCGGTCGCGCTGGCAGCCGGCCTCGCCGTCGCCTTCACCGCCA
TCGGGCTGTTCGTCGCGACGATCGGCTTCACCGTCGGGCTGGACGGCGACGTGTTCCGGCGCGCCGGCGCGGTGCTCTTG
GTGCTCCTGGGCGCGGTGCTGATGCTGCCGCGACTCCAGGCCCGGGTCGCGACGGCGGCCAGCCCGATCGGCGCCTGGGC
GGAGGACCGCTTCGGCGGCGCCGGCTCCGGGGGTGTGTCCGGCCAGTTCGCCGTGGGGCTGCTGCTCGGCGCGGCCTGGA
GTCCCTGCGTGGGCCCGACCCTGGGCGCGGCCTCGCTGATGGCGGCGCGGGGCGAGCATCTCGGGGGTGTCGCCCTGACC
ATGCTGGCCTTCGGGATCGGCGCCGCGGCCCCGCTGATGCTCCTCGGCTTCGTCTCCCGCGAGGCGCTGCTGCGCTGGCG
CGGCGGCCTCGCCGCGGCCGGCCGGGCCGCGAAGGCCGCGCTCGGCGCCGTGATGGTCGTGCTCGGCCTGCTGGTGCTGA
CGGGCCTCGACAAGCGGGTCGAGGCCGCGGCCGTCGCGGCCTCGCCGGACTGGCTCAACGCGCTGACAACGCGCTACTGA

Upstream 100 bases:

>100_bases
CGCCTTGTTCCCGCGGACCCGCGTCCGCCTGGCGCGTTGACGGCCCGCGCGGCAGGGTCGAAGCCTCCCCCGGCGAGGCG
CCAGCGGGAGGGCACGGGGC

Downstream 100 bases:

>100_bases
CCCGGCGAGGCCCCCGGGTTTATCCGGAACGGAGTTCAGCCATGAGCGATGCCCCCCGCCTGACCAGTCTCGCCCACGGA
GGCGGATGCGGCTGCAAGCT

Product: cytochrome c biogenesis transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MLGTVGFAFLAGLLSVLSPCVLPLIPIVLGTAAAEHRLGPVALAAGLAVAFTAIGLFVATIGFTVGLDGDVFRRAGAVLL
VLLGAVLMLPRLQARVATAASPIGAWAEDRFGGAGSGGVSGQFAVGLLLGAAWSPCVGPTLGAASLMAARGEHLGGVALT
MLAFGIGAAAPLMLLGFVSREALLRWRGGLAAAGRAAKAALGAVMVVLGLLVLTGLDKRVEAAAVAASPDWLNALTTRY

Sequences:

>Translated_239_residues
MLGTVGFAFLAGLLSVLSPCVLPLIPIVLGTAAAEHRLGPVALAAGLAVAFTAIGLFVATIGFTVGLDGDVFRRAGAVLL
VLLGAVLMLPRLQARVATAASPIGAWAEDRFGGAGSGGVSGQFAVGLLLGAAWSPCVGPTLGAASLMAARGEHLGGVALT
MLAFGIGAAAPLMLLGFVSREALLRWRGGLAAAGRAAKAALGAVMVVLGLLVLTGLDKRVEAAAVAASPDWLNALTTRY
>Mature_239_residues
MLGTVGFAFLAGLLSVLSPCVLPLIPIVLGTAAAEHRLGPVALAAGLAVAFTAIGLFVATIGFTVGLDGDVFRRAGAVLL
VLLGAVLMLPRLQARVATAASPIGAWAEDRFGGAGSGGVSGQFAVGLLLGAAWSPCVGPTLGAASLMAARGEHLGGVALT
MLAFGIGAAAPLMLLGFVSREALLRWRGGLAAAGRAAKAALGAVMVVLGLLVLTGLDKRVEAAAVAASPDWLNALTTRY

Specific function: Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane, promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spor

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 23702; Mature: 23702

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGTVGFAFLAGLLSVLSPCVLPLIPIVLGTAAAEHRLGPVALAAGLAVAFTAIGLFVAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IGFTVGLDGDVFRRAGAVLLVLLGAVLMLPRLQARVATAASPIGAWAEDRFGGAGSGGVS
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCC
GQFAVGLLLGAAWSPCVGPTLGAASLMAARGEHLGGVALTMLAFGIGAAAPLMLLGFVSR
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EALLRWRGGLAAAGRAAKAALGAVMVVLGLLVLTGLDKRVEAAAVAASPDWLNALTTRY
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCC
>Mature Secondary Structure
MLGTVGFAFLAGLLSVLSPCVLPLIPIVLGTAAAEHRLGPVALAAGLAVAFTAIGLFVAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IGFTVGLDGDVFRRAGAVLLVLLGAVLMLPRLQARVATAASPIGAWAEDRFGGAGSGGVS
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCC
GQFAVGLLLGAAWSPCVGPTLGAASLMAARGEHLGGVALTMLAFGIGAAAPLMLLGFVSR
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EALLRWRGGLAAAGRAAKAALGAVMVVLGLLVLTGLDKRVEAAAVAASPDWLNALTTRY
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]