| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yceI [H]
Identifier: 170751627
GI number: 170751627
Start: 5574743
End: 5575351
Strand: Reverse
Name: yceI [H]
Synonym: Mrad2831_5253
Alternate gene names: 170751627
Gene position: 5575351-5574743 (Counterclockwise)
Preceding gene: 170751629
Following gene: 170751626
Centisome position: 91.73
GC content: 68.97
Gene sequence:
>609_bases GTGAAGTCCATCCTCATCCCCGGCCTCGCCCTGGCCCTCGTCGCCACCCCGGTCCTGGCCCAGTCGCCGGCCACCCGCGA CCCGGCCCAGATCCAGGCCGGCACCTACGCGGTCGATCCCGGCCATACCCAGGTCGGCTGGCGCGTGTCGCACATGGGCT TCTCGAACTATGCCGGCGGCTTCTCGGACGTGTCGGGCAGCCTCACCCTCGACTCGAAGAACCCCGCCGCCTCGAAGCTC TCGGTGAAGATCCCGGTCGCCTCGGTGACGACCACCAGCGCCAAGCTCACCGACGAGCTCAAGGGCGACCAGTGGCTCGA CGCCGGGAAGTACCCGACCATGACCTTCGTCTCGACCAAGGTCGCGCCGGCCGGCAAGGACCACGCGAAGGTGACGGGCG ACCTGACGCTCCACGGGGTGACCAAGCCGGTGACCCTCGACGTCACCCTGGTCGGCGCCGGCGCCAACCCGCTGAACAAG AAGTACACGGTCGGCTTCGAGGCCACCGGCACGCTCAAGCGCTCGGAGTTCGGCGTGAAGACCTACGTGCCGCTGATCGG CGACGAACTGCACCTCACCATCGCGGGCGCCTTCGAGCGTCAGGACTGA
Upstream 100 bases:
>100_bases GCTCAACCTCGGCCGCCAACGTGGGTATCTCACCGGCCTCGGCTCTCGCGGCCCTTCCCCCAGGTGGGTCGGGTCGCCCG TTTCAATCCCGGAGACACCC
Downstream 100 bases:
>100_bases CAGACGGCTCGGAGAACGGCCATGGCAACCGGTGTGTCCGCGCGGCGGTACTCCGCCGTGGCCATCCTGCTGCACTGGGC GAGCGCGCTCGGCGTGCTGG
Product: YceI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKSILIPGLALALVATPVLAQSPATRDPAQIQAGTYAVDPGHTQVGWRVSHMGFSNYAGGFSDVSGSLTLDSKNPAASKL SVKIPVASVTTTSAKLTDELKGDQWLDAGKYPTMTFVSTKVAPAGKDHAKVTGDLTLHGVTKPVTLDVTLVGAGANPLNK KYTVGFEATGTLKRSEFGVKTYVPLIGDELHLTIAGAFERQD
Sequences:
>Translated_202_residues MKSILIPGLALALVATPVLAQSPATRDPAQIQAGTYAVDPGHTQVGWRVSHMGFSNYAGGFSDVSGSLTLDSKNPAASKL SVKIPVASVTTTSAKLTDELKGDQWLDAGKYPTMTFVSTKVAPAGKDHAKVTGDLTLHGVTKPVTLDVTLVGAGANPLNK KYTVGFEATGTLKRSEFGVKTYVPLIGDELHLTIAGAFERQD >Mature_202_residues MKSILIPGLALALVATPVLAQSPATRDPAQIQAGTYAVDPGHTQVGWRVSHMGFSNYAGGFSDVSGSLTLDSKNPAASKL SVKIPVASVTTTSAKLTDELKGDQWLDAGKYPTMTFVSTKVAPAGKDHAKVTGDLTLHGVTKPVTLDVTLVGAGANPLNK KYTVGFEATGTLKRSEFGVKTYVPLIGDELHLTIAGAFERQD
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=165, Percent_Identity=42.4242424242424, Blast_Score=123, Evalue=1e-29,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 21107; Mature: 21107
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSILIPGLALALVATPVLAQSPATRDPAQIQAGTYAVDPGHTQVGWRVSHMGFSNYAGG CCCEECCHHHHHHHHHHHHHCCCCCCCCCEEECCEEEECCCCCEECEEEEECCCCCCCCC FSDVSGSLTLDSKNPAASKLSVKIPVASVTTTSAKLTDELKGDQWLDAGKYPTMTFVSTK CCCCCCEEEECCCCCCCCEEEEEEEEEEEEECCHHHHHHCCCCCEECCCCCCEEEEEEEE VAPAGKDHAKVTGDLTLHGVTKPVTLDVTLVGAGANPLNKKYTVGFEATGTLKRSEFGVK CCCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCEECCCCCCE TYVPLIGDELHLTIAGAFERQD EEEEECCCEEEEEEEEEEECCC >Mature Secondary Structure MKSILIPGLALALVATPVLAQSPATRDPAQIQAGTYAVDPGHTQVGWRVSHMGFSNYAGG CCCEECCHHHHHHHHHHHHHCCCCCCCCCEEECCEEEECCCCCEECEEEEECCCCCCCCC FSDVSGSLTLDSKNPAASKLSVKIPVASVTTTSAKLTDELKGDQWLDAGKYPTMTFVSTK CCCCCCEEEECCCCCCCCEEEEEEEEEEEEECCHHHHHHCCCCCEECCCCCCEEEEEEEE VAPAGKDHAKVTGDLTLHGVTKPVTLDVTLVGAGANPLNKKYTVGFEATGTLKRSEFGVK CCCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCEECCCCCCE TYVPLIGDELHLTIAGAFERQD EEEEECCCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA