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The map label for this gene is ctrB [H]

Identifier: 170751434

GI number: 170751434

Start: 5368018

End: 5369328

Strand: Direct

Name: ctrB [H]

Synonym: Mrad2831_5053

Alternate gene names: 170751434

Gene position: 5368018-5369328 (Clockwise)

Preceding gene: 170751430

Following gene: 170751435

Centisome position: 88.32

GC content: 66.82

Gene sequence:

>1311_bases
ATGAGCTTCGACGACGTCAAGGACGACACGCGCGAAGGCGAGATCGTGACGTTCGCCGCTCCGACCATGACGGAGTTGCG
GCGCAGTGCGGAGACGATCCGGCCGGTGCCGGAGAAGCGCACCGCGCGGGCCCTCGTGACCACGGTGCGGCAGCGTCTCG
ACTGGAGCCGTCTGCCGGGCCTGCGCCCCCGCGAGGAGGACACCTCGACCTACGGCGCGCGGATCATCCGCCGCGTCGGC
CTGTTCGTGCTCCTGCCGACCCTCGTGGTCGGGCTCTACCTGTTCGCGTTCGCGTCCAACCAGTACGTCGCCGAAGCCCA
GTTCGCGGTCCGCGGCAATGTCGAGCCGATGGAGAACATCTCGCTCGGCCAGTACACGAACCTCATCCAGAAGCACAACA
GCCAGGACAGCTTCATCGTCCGCGACTTCATCAACAGCCAGACGCTGGTCGAGGCGCTCGAGAAGAGCATCGGCATCTCC
AAGATGTTCTCCCGGTCCGAGGCGGATTTCTGGGCCCGCTTCGACCCCAGTGATCCCATCGAGGACCTGACCAAATACTG
GCGCAAGCACGTCGAGGCGCATATCGACTCGATCTCGGGCGTGATCCGGCTGTCCGTGCGCGCCTTCACGCCCGAGGACG
CCCTGACCATCGCACAGGCGGTGGTGTCGCGCTCCGAGGCGCTGATCAACGACATCTCGAAGCGCGCGCAGGCCGACATG
GTCGCCCAGGCCGAGGCCGACGCGAAGACCGCGCAGGACCGGCTGCGCAAGGCGCACGTGGCGCTCCAGGCGTTCCGCAA
CCAGTGGGGCGTGATCGATCCGATCAAGACCGCCGAGGGGACGCTGACCACGCTGACCCTCCTGCGGAAGGACAAGCTGA
AGGCCGAGAACGACCTGCAGGTCCTGCGCAGCTCCAATCTCGACGAGCGCTCGCGCTCGATCCAGACGCTGGTGGCCAAC
ATCGCGGCCATCGATCAGCAAATGAAGGCGCTTCAGGACGAGCTGACGAGCGCCAACGCCGCTGCCGGCGGCCAGAACAT
GACCGAGGCGCTGCTCCAGTACGAGGGCCTGCTGGTCGAGCGGACCATCGCCGAGAAGCTCGAGGAGTCGGCCCACAGCC
TGCTGGACCGGGCCCGCATCTCGGCCAGCAAGCAGCACATCTTCCTGGCCACGTTCGTGCCGCCGGTCCTGCCGACCGAC
AGCCTCTATCCCGAGCGGGGCCACTCCCTGCTGGTGTCGTTCTTCTGCTTCCTGGTGATCTGGAGCTCGTCCGCGCTGCT
GATCGCCGGCATCCGCGACCAGCGGATGTAG

Upstream 100 bases:

>100_bases
AAAGGGCCTAAAAGAACGGGATCCCGGTCACCGCGCACGGGCCGCCCCTCGGCCGGCGCCGCGGCAGCGGAACCGGCGCA
GACCCAGGAACAAAGAGCGG

Downstream 100 bases:

>100_bases
TCGCGGGGACCGCGGCCCCGGGATCTGGATCCCGGGGCGCGCGATCTGTAGAGGGAGGCGGCCCGGCGAACCGGGCGCCC
CTGGATGAGCGAAGTCTAAC

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MSFDDVKDDTREGEIVTFAAPTMTELRRSAETIRPVPEKRTARALVTTVRQRLDWSRLPGLRPREEDTSTYGARIIRRVG
LFVLLPTLVVGLYLFAFASNQYVAEAQFAVRGNVEPMENISLGQYTNLIQKHNSQDSFIVRDFINSQTLVEALEKSIGIS
KMFSRSEADFWARFDPSDPIEDLTKYWRKHVEAHIDSISGVIRLSVRAFTPEDALTIAQAVVSRSEALINDISKRAQADM
VAQAEADAKTAQDRLRKAHVALQAFRNQWGVIDPIKTAEGTLTTLTLLRKDKLKAENDLQVLRSSNLDERSRSIQTLVAN
IAAIDQQMKALQDELTSANAAAGGQNMTEALLQYEGLLVERTIAEKLEESAHSLLDRARISASKQHIFLATFVPPVLPTD
SLYPERGHSLLVSFFCFLVIWSSSALLIAGIRDQRM

Sequences:

>Translated_436_residues
MSFDDVKDDTREGEIVTFAAPTMTELRRSAETIRPVPEKRTARALVTTVRQRLDWSRLPGLRPREEDTSTYGARIIRRVG
LFVLLPTLVVGLYLFAFASNQYVAEAQFAVRGNVEPMENISLGQYTNLIQKHNSQDSFIVRDFINSQTLVEALEKSIGIS
KMFSRSEADFWARFDPSDPIEDLTKYWRKHVEAHIDSISGVIRLSVRAFTPEDALTIAQAVVSRSEALINDISKRAQADM
VAQAEADAKTAQDRLRKAHVALQAFRNQWGVIDPIKTAEGTLTTLTLLRKDKLKAENDLQVLRSSNLDERSRSIQTLVAN
IAAIDQQMKALQDELTSANAAAGGQNMTEALLQYEGLLVERTIAEKLEESAHSLLDRARISASKQHIFLATFVPPVLPTD
SLYPERGHSLLVSFFCFLVIWSSSALLIAGIRDQRM
>Mature_435_residues
SFDDVKDDTREGEIVTFAAPTMTELRRSAETIRPVPEKRTARALVTTVRQRLDWSRLPGLRPREEDTSTYGARIIRRVGL
FVLLPTLVVGLYLFAFASNQYVAEAQFAVRGNVEPMENISLGQYTNLIQKHNSQDSFIVRDFINSQTLVEALEKSIGISK
MFSRSEADFWARFDPSDPIEDLTKYWRKHVEAHIDSISGVIRLSVRAFTPEDALTIAQAVVSRSEALINDISKRAQADMV
AQAEADAKTAQDRLRKAHVALQAFRNQWGVIDPIKTAEGTLTTLTLLRKDKLKAENDLQVLRSSNLDERSRSIQTLVANI
AAIDQQMKALQDELTSANAAAGGQNMTEALLQYEGLLVERTIAEKLEESAHSLLDRARISASKQHIFLATFVPPVLPTDS
LYPERGHSLLVSFFCFLVIWSSSALLIAGIRDQRM

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the CtrC and CtrD proteins [H]

COG id: COG3524

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexC/CtrB/KpsE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005705
- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 48831; Mature: 48700

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDDVKDDTREGEIVTFAAPTMTELRRSAETIRPVPEKRTARALVTTVRQRLDWSRLPG
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHCCC
LRPREEDTSTYGARIIRRVGLFVLLPTLVVGLYLFAFASNQYVAEAQFAVRGNVEPMENI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHCC
SLGQYTNLIQKHNSQDSFIVRDFINSQTLVEALEKSIGISKMFSRSEADFWARFDPSDPI
CHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHCHHHHHHCCCCCCEEECCCCCCH
EDLTKYWRKHVEAHIDSISGVIRLSVRAFTPEDALTIAQAVVSRSEALINDISKRAQADM
HHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAQAEADAKTAQDRLRKAHVALQAFRNQWGVIDPIKTAEGTLTTLTLLRKDKLKAENDLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
VLRSSNLDERSRSIQTLVANIAAIDQQMKALQDELTSANAAAGGQNMTEALLQYEGLLVE
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RTIAEKLEESAHSLLDRARISASKQHIFLATFVPPVLPTDSLYPERGHSLLVSFFCFLVI
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
WSSSALLIAGIRDQRM
HCCCCEEEECCHHCCC
>Mature Secondary Structure 
SFDDVKDDTREGEIVTFAAPTMTELRRSAETIRPVPEKRTARALVTTVRQRLDWSRLPG
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHCCC
LRPREEDTSTYGARIIRRVGLFVLLPTLVVGLYLFAFASNQYVAEAQFAVRGNVEPMENI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHCC
SLGQYTNLIQKHNSQDSFIVRDFINSQTLVEALEKSIGISKMFSRSEADFWARFDPSDPI
CHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHCHHHHHHCCCCCCEEECCCCCCH
EDLTKYWRKHVEAHIDSISGVIRLSVRAFTPEDALTIAQAVVSRSEALINDISKRAQADM
HHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAQAEADAKTAQDRLRKAHVALQAFRNQWGVIDPIKTAEGTLTTLTLLRKDKLKAENDLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
VLRSSNLDERSRSIQTLVANIAAIDQQMKALQDELTSANAAAGGQNMTEALLQYEGLLVE
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RTIAEKLEESAHSLLDRARISASKQHIFLATFVPPVLPTDSLYPERGHSLLVSFFCFLVI
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
WSSSALLIAGIRDQRM
HCCCCEEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]