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The map label for this gene is omp2b [H]

Identifier: 170751336

GI number: 170751336

Start: 5278753

End: 5280450

Strand: Direct

Name: omp2b [H]

Synonym: Mrad2831_4954

Alternate gene names: 170751336

Gene position: 5278753-5280450 (Clockwise)

Preceding gene: 170751334

Following gene: 170751337

Centisome position: 86.85

GC content: 69.79

Gene sequence:

>1698_bases
ATGGCCGATTCGATGCATGTTGTGTCTGCGGATTACCGGAAACATCGTACGAAGCGTGGGACAAAGGGCGTTCTGGCGGG
TGTCGCGGGGGTGCTGAGTCTGCCAGTGGCGGCGGCGGAACTTCCCGATCGGCGAAAATCGCAGCTCATCGAGCACGTGC
GGATCTGCTCGGCCTACGGCCAAGCCTTCTTCTTCATCCCCGGCACGGATACCTGCCTGCGCCTCTCCGGCCGCGCGCGC
TTCGAGTACGCCTACCAGCCCTCCTACAGCCGCTCAGGCACCGCTGCCGCCACCCCGGGGGATTACAGCGGCTACCAGGG
CCGGCTCCGGATCAACCTCGATGCCCGGACCCAGACGTCCTACGGGACCCTGCGCGCCTTCCTGCGCCTCGACGCTGGGA
GCCGGACCGGCTTCGCCACCATGCATGCCGGCGCGCTGAACCGGATCGGCGGCGCCTTCCCGGCCCTTGGCGTCGACCAG
TTCGGGCGGGCCCAGCAGCAGTTCAACGTCGACAAGGCGTTCATCCAGTTCGCCGGCATCACCGCCGGCCGCGCCTCGTC
GTTCTTCGATTTCTACGCCCACGACTTCGAGTTCATCGTCTCCACCATCGGCTCGGACAATCCCTCGACCAACCTCGCCG
CCTACACGGCGACGCTGGGCAAGGGGCTGTCCGCCTCGCTGTCGGTGGAGGACCCGATGTTCCGCCGCACGCCGGTCTAC
GCGTCCCAGAACGCTCCGGCCTCGGCCTTCCCGAACCCCGGCGCGATCCTCTCGCCCGGGAACCCCGTCGCCCCGATCTT
CGTCGGGTACGACGCCGCCGGCCGCCCGACCGGTGTGGGCTTCGTGGACACGGTCCAGCGCAGCCGCATGCCCGACCTCG
TCGGCGTGCTGCGCTCCGACCAGTCCTGGGGCTCCGCGCAGCTCTCGGGCGCCGTGCACGAGGTCAACCACGGCCTGCTC
AGCAGCGTCGCGTTCGCCGGCTCGAACCTGGGCGCGCCGGTCTCGGTGGGCAACAACCGCGCTCCGGCCGGCGGAGCCTC
CGCCCTCGGCTGGGCCGTGCAGGGAGGCGTGAAGATCAACCTGCCAGCGATAGCGACCGGCGACACCCTCTACCTCCAGG
GCGCCTACGGGGAGGGCACCGCCCTGTATACCGGCCTGCCGGCCTATAACGGCCCCTGGGCGCAGTCGGCCACGGCGGTG
CAGGGGGCGGCCTTCTCCCAGTTCTTCAACGACGGCGTCATCAATCCCTTCACCCAGCGCCTCCAGCTGTCGACGAGCTA
CTCGTTCACGGCGGCGATGCTGCACTACTGGACGCCCGCGGTCCGCTCCGCCTTCTTCGGCTCCTACGGCGCCCTGAGCT
TCGCCCGCGGCGCCCGCGCGGCGCAGGGCGCCTATTTCGGCGTGACCGGGACCGGGCCGGGCACCCCCGGGACGCGGTTC
TTCGACCTGAGCCAAGTGCTGCGGGACAGCTACCGCTTCGTCGCCGGCGCCAACCTGATCTGGTCGCCGGTGAAGGAGTT
CGATATCGGCGTCGAGGCGATCTACACGCGCTACGGGCCCCGGAGCGGCCGCATCCTCGACCTAGGCCGGTATCCCAACC
AGAACGCGGCCTACGTCAACAACCCCGCCAACCCGGTCTCGACCGCCCGCCACGTCGACGTCATCCAGGTGCGCGCGCGC
GTGCAGCGGGACTTCTGA

Upstream 100 bases:

>100_bases
GTCGTGACAAGTCGAGCCGAGCACAGGCCTGAGATAACCGGCCTGGGATTATCCGGCGCCGCGATCCGTCCGACCTAAAG
GGGGATGTGCGGATGGTGGA

Downstream 100 bases:

>100_bases
GGGCGGCCGCGGGCGGCGAGACCGGCTTGGCCGGGAGCCGGTTCCGACCTCGGGCGTTGAACCGCCGGCCGTGGCACCCA
TCACGGTCGCCGGTTCGATC

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 564

Protein sequence:

>565_residues
MADSMHVVSADYRKHRTKRGTKGVLAGVAGVLSLPVAAAELPDRRKSQLIEHVRICSAYGQAFFFIPGTDTCLRLSGRAR
FEYAYQPSYSRSGTAAATPGDYSGYQGRLRINLDARTQTSYGTLRAFLRLDAGSRTGFATMHAGALNRIGGAFPALGVDQ
FGRAQQQFNVDKAFIQFAGITAGRASSFFDFYAHDFEFIVSTIGSDNPSTNLAAYTATLGKGLSASLSVEDPMFRRTPVY
ASQNAPASAFPNPGAILSPGNPVAPIFVGYDAAGRPTGVGFVDTVQRSRMPDLVGVLRSDQSWGSAQLSGAVHEVNHGLL
SSVAFAGSNLGAPVSVGNNRAPAGGASALGWAVQGGVKINLPAIATGDTLYLQGAYGEGTALYTGLPAYNGPWAQSATAV
QGAAFSQFFNDGVINPFTQRLQLSTSYSFTAAMLHYWTPAVRSAFFGSYGALSFARGARAAQGAYFGVTGTGPGTPGTRF
FDLSQVLRDSYRFVAGANLIWSPVKEFDIGVEAIYTRYGPRSGRILDLGRYPNQNAAYVNNPANPVSTARHVDVIQVRAR
VQRDF

Sequences:

>Translated_565_residues
MADSMHVVSADYRKHRTKRGTKGVLAGVAGVLSLPVAAAELPDRRKSQLIEHVRICSAYGQAFFFIPGTDTCLRLSGRAR
FEYAYQPSYSRSGTAAATPGDYSGYQGRLRINLDARTQTSYGTLRAFLRLDAGSRTGFATMHAGALNRIGGAFPALGVDQ
FGRAQQQFNVDKAFIQFAGITAGRASSFFDFYAHDFEFIVSTIGSDNPSTNLAAYTATLGKGLSASLSVEDPMFRRTPVY
ASQNAPASAFPNPGAILSPGNPVAPIFVGYDAAGRPTGVGFVDTVQRSRMPDLVGVLRSDQSWGSAQLSGAVHEVNHGLL
SSVAFAGSNLGAPVSVGNNRAPAGGASALGWAVQGGVKINLPAIATGDTLYLQGAYGEGTALYTGLPAYNGPWAQSATAV
QGAAFSQFFNDGVINPFTQRLQLSTSYSFTAAMLHYWTPAVRSAFFGSYGALSFARGARAAQGAYFGVTGTGPGTPGTRF
FDLSQVLRDSYRFVAGANLIWSPVKEFDIGVEAIYTRYGPRSGRILDLGRYPNQNAAYVNNPANPVSTARHVDVIQVRAR
VQRDF
>Mature_564_residues
ADSMHVVSADYRKHRTKRGTKGVLAGVAGVLSLPVAAAELPDRRKSQLIEHVRICSAYGQAFFFIPGTDTCLRLSGRARF
EYAYQPSYSRSGTAAATPGDYSGYQGRLRINLDARTQTSYGTLRAFLRLDAGSRTGFATMHAGALNRIGGAFPALGVDQF
GRAQQQFNVDKAFIQFAGITAGRASSFFDFYAHDFEFIVSTIGSDNPSTNLAAYTATLGKGLSASLSVEDPMFRRTPVYA
SQNAPASAFPNPGAILSPGNPVAPIFVGYDAAGRPTGVGFVDTVQRSRMPDLVGVLRSDQSWGSAQLSGAVHEVNHGLLS
SVAFAGSNLGAPVSVGNNRAPAGGASALGWAVQGGVKINLPAIATGDTLYLQGAYGEGTALYTGLPAYNGPWAQSATAVQ
GAAFSQFFNDGVINPFTQRLQLSTSYSFTAAMLHYWTPAVRSAFFGSYGALSFARGARAAQGAYFGVTGTGPGTPGTRFF
DLSQVLRDSYRFVAGANLIWSPVKEFDIGVEAIYTRYGPRSGRILDLGRYPNQNAAYVNNPANPVSTARHVDVIQVRARV
QRDF

Specific function: Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alphaproteobacteria porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003684 [H]

Pfam domain/function: PF02530 Porin_2 [H]

EC number: NA

Molecular weight: Translated: 60009; Mature: 59878

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSMHVVSADYRKHRTKRGTKGVLAGVAGVLSLPVAAAELPDRRKSQLIEHVRICSAYG
CCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCC
QAFFFIPGTDTCLRLSGRARFEYAYQPSYSRSGTAAATPGDYSGYQGRLRINLDARTQTS
CEEEEECCCCCEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
YGTLRAFLRLDAGSRTGFATMHAGALNRIGGAFPALGVDQFGRAQQQFNVDKAFIQFAGI
HHHHEEHHEECCCCCCCEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCC
TAGRASSFFDFYAHDFEFIVSTIGSDNPSTNLAAYTATLGKGLSASLSVEDPMFRRTPVY
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCEEECCCCCHHCCCCC
ASQNAPASAFPNPGAILSPGNPVAPIFVGYDAAGRPTGVGFVDTVQRSRMPDLVGVLRSD
CCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHCC
QSWGSAQLSGAVHEVNHGLLSSVAFAGSNLGAPVSVGNNRAPAGGASALGWAVQGGVKIN
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHEEECCEEEE
LPAIATGDTLYLQGAYGEGTALYTGLPAYNGPWAQSATAVQGAAFSQFFNDGVINPFTQR
CCEEECCCEEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH
LQLSTSYSFTAAMLHYWTPAVRSAFFGSYGALSFARGARAAQGAYFGVTGTGPGTPGTRF
EEECCCCHHHHHHHHHHCHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCH
FDLSQVLRDSYRFVAGANLIWSPVKEFDIGVEAIYTRYGPRSGRILDLGRYPNQNAAYVN
HHHHHHHHHHHHHHCCCCHHHCCHHHHCCCHHHHEECCCCCCCCEEEECCCCCCCCEEEC
NPANPVSTARHVDVIQVRARVQRDF
CCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADSMHVVSADYRKHRTKRGTKGVLAGVAGVLSLPVAAAELPDRRKSQLIEHVRICSAYG
CCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCC
QAFFFIPGTDTCLRLSGRARFEYAYQPSYSRSGTAAATPGDYSGYQGRLRINLDARTQTS
CEEEEECCCCCEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
YGTLRAFLRLDAGSRTGFATMHAGALNRIGGAFPALGVDQFGRAQQQFNVDKAFIQFAGI
HHHHEEHHEECCCCCCCEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCC
TAGRASSFFDFYAHDFEFIVSTIGSDNPSTNLAAYTATLGKGLSASLSVEDPMFRRTPVY
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCEEECCCCCHHCCCCC
ASQNAPASAFPNPGAILSPGNPVAPIFVGYDAAGRPTGVGFVDTVQRSRMPDLVGVLRSD
CCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHCC
QSWGSAQLSGAVHEVNHGLLSSVAFAGSNLGAPVSVGNNRAPAGGASALGWAVQGGVKIN
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHEEECCEEEE
LPAIATGDTLYLQGAYGEGTALYTGLPAYNGPWAQSATAVQGAAFSQFFNDGVINPFTQR
CCEEECCCEEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH
LQLSTSYSFTAAMLHYWTPAVRSAFFGSYGALSFARGARAAQGAYFGVTGTGPGTPGTRF
EEECCCCHHHHHHHHHHCHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCH
FDLSQVLRDSYRFVAGANLIWSPVKEFDIGVEAIYTRYGPRSGRILDLGRYPNQNAAYVN
HHHHHHHHHHHHHHCCCCHHHCCHHHHCCCHHHHEECCCCCCCCEEEECCCCCCCCEEEC
NPANPVSTARHVDVIQVRARVQRDF
CCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2509359 [H]