| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ydgJ [C]
Identifier: 170751320
GI number: 170751320
Start: 5256244
End: 5257221
Strand: Direct
Name: ydgJ [C]
Synonym: Mrad2831_4937
Alternate gene names: 170751320
Gene position: 5256244-5257221 (Clockwise)
Preceding gene: 170751319
Following gene: 170751321
Centisome position: 86.48
GC content: 77.71
Gene sequence:
>978_bases ATGCCGACCTCCGCCGCACCGCTCGCCCTCGGGATCATCGGCGCGGGCATCATGGGTGAGCGCCTGCTCGGCGCGATCCA CGGGGCGGCGGACTCGCCCGTGCGGGTCGCGGCGATCTGGGACCCGGCCCCGGAGGCCCTGGCCCGGATCGGCGCGGCGT TCCCGGCGGTGCCGCGGGTGGCCGATCCCGCCGCCGTCGTCGCGGCGAGCGACTGCGTCTACGTCGCCTCGCCGCCCGCC TCGCATCTCGGCTACGCCCGCGCCGCCCTGGCGGCCGGCCGGAGCGTCTTCTGCGAGAAGCCGCTGGCCATCGACCGCGC CGACGCCCGCGCCTTCGTGGCGGAGGCGGGGGGCGCGGGCGCGGTCAATTTCCCGTTCGCCTCGTCGCCGGGCGTCGCCA CCCTCGAGCGCTGGATCGCGGCCGGCGCGGTCGGCACGCCCCGGACGCTCACCGTGGCGGTGGCCTTCGCCCGCTGGCCC CGCCCGTGGCAGGCCGACGCCGCCCGCTGGCTCGACGCGCGCGGCGAGGGCGGCTTCACCCGCGAGGTGGTCTCGCACTT CCTGTTCCTGGCCCGCCGCCAGCTCGGCCCGCTCGCGAGTCTCGCCGGACGGATCGCCTTCCCGGAGCCGGGCCGGTCCG AGCGCGCGATCGACGTGACGCTCACGGCGGGCGGGATCCCCGTCACCCTGACCGGCCGGGTCGGGGGCGTCGAGGCCGAC GACCACAACACGTGGACGCTGGAGGGCGACGCGGGCGCCGTCCGGCTGCGCGACTGGGCCATCGCCGAGCGTCGGGGCGC CGACGGGCGGTTCGAGCCGGAGCCCGACGCGATCCCGAACGAGCGGCTGCGGCCGATCACCCTCCGGCGCCAGCTCGAGG GCGTCGTCCGCATGGCGCGCGGCGAGCCCCACCACCTCGCCACCTTCGCGGAGGCGCTCGACGTGCAGGAGTTCGTCGAG GCTATCCTGGCGCTGTGA
Upstream 100 bases:
>100_bases AGGAGGCCGGCGGCCTTTCCCGCGCCGGCCCGGGCTCCTAAAGCCTGCGACGGGCCGCGCCGCGCGGCCGGTCATCCCGA ACCTCCGCACGGATCCCCGC
Downstream 100 bases:
>100_bases GGGCGGAGGCCCTCGGACCCTGTCCGGGTGATGGCTTCGGCCCCGCCGCCCTGGCGGGCAGAGCGAAGCGATCCAGGCGC GCAACCCTCGAAGGGAGCGC
Product: oxidoreductase domain-containing protein
Products: NA
Alternate protein names: NAD-Dependant Oxidoreductase; Gfo/Idh/MocA Family Oxidoreductase; Oxidoreductase Domain Protein; Dehydrogenases; Dehydrogenase
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MPTSAAPLALGIIGAGIMGERLLGAIHGAADSPVRVAAIWDPAPEALARIGAAFPAVPRVADPAAVVAASDCVYVASPPA SHLGYARAALAAGRSVFCEKPLAIDRADARAFVAEAGGAGAVNFPFASSPGVATLERWIAAGAVGTPRTLTVAVAFARWP RPWQADAARWLDARGEGGFTREVVSHFLFLARRQLGPLASLAGRIAFPEPGRSERAIDVTLTAGGIPVTLTGRVGGVEAD DHNTWTLEGDAGAVRLRDWAIAERRGADGRFEPEPDAIPNERLRPITLRRQLEGVVRMARGEPHHLATFAEALDVQEFVE AILAL
Sequences:
>Translated_325_residues MPTSAAPLALGIIGAGIMGERLLGAIHGAADSPVRVAAIWDPAPEALARIGAAFPAVPRVADPAAVVAASDCVYVASPPA SHLGYARAALAAGRSVFCEKPLAIDRADARAFVAEAGGAGAVNFPFASSPGVATLERWIAAGAVGTPRTLTVAVAFARWP RPWQADAARWLDARGEGGFTREVVSHFLFLARRQLGPLASLAGRIAFPEPGRSERAIDVTLTAGGIPVTLTGRVGGVEAD DHNTWTLEGDAGAVRLRDWAIAERRGADGRFEPEPDAIPNERLRPITLRRQLEGVVRMARGEPHHLATFAEALDVQEFVE AILAL >Mature_324_residues PTSAAPLALGIIGAGIMGERLLGAIHGAADSPVRVAAIWDPAPEALARIGAAFPAVPRVADPAAVVAASDCVYVASPPAS HLGYARAALAAGRSVFCEKPLAIDRADARAFVAEAGGAGAVNFPFASSPGVATLERWIAAGAVGTPRTLTVAVAFARWPR PWQADAARWLDARGEGGFTREVVSHFLFLARRQLGPLASLAGRIAFPEPGRSERAIDVTLTAGGIPVTLTGRVGGVEADD HNTWTLEGDAGAVRLRDWAIAERRGADGRFEPEPDAIPNERLRPITLRRQLEGVVRMARGEPHHLATFAEALDVQEFVEA ILAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 34037; Mature: 33906
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSAAPLALGIIGAGIMGERLLGAIHGAADSPVRVAAIWDPAPEALARIGAAFPAVPRV CCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCC ADPAAVVAASDCVYVASPPASHLGYARAALAAGRSVFCEKPLAIDRADARAFVAEAGGAG CCCHHEEEECCEEEEECCCHHHHHHHHHHHHCCCHHEECCCCCCCCCHHHEEEECCCCCC AVNFPFASSPGVATLERWIAAGAVGTPRTLTVAVAFARWPRPWQADAARWLDARGEGGFT EEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCHHHHHHHHHCCCCCCHH REVVSHFLFLARRQLGPLASLAGRIAFPEPGRSERAIDVTLTAGGIPVTLTGRVGGVEAD HHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCEECC DHNTWTLEGDAGAVRLRDWAIAERRGADGRFEPEPDAIPNERLRPITLRRQLEGVVRMAR CCCEEEEECCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC GEPHHLATFAEALDVQEFVEAILAL CCCHHHHHHHHHHCHHHHHHHHHCC >Mature Secondary Structure PTSAAPLALGIIGAGIMGERLLGAIHGAADSPVRVAAIWDPAPEALARIGAAFPAVPRV CCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCC ADPAAVVAASDCVYVASPPASHLGYARAALAAGRSVFCEKPLAIDRADARAFVAEAGGAG CCCHHEEEECCEEEEECCCHHHHHHHHHHHHCCCHHEECCCCCCCCCHHHEEEECCCCCC AVNFPFASSPGVATLERWIAAGAVGTPRTLTVAVAFARWPRPWQADAARWLDARGEGGFT EEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCHHHHHHHHHCCCCCCHH REVVSHFLFLARRQLGPLASLAGRIAFPEPGRSERAIDVTLTAGGIPVTLTGRVGGVEAD HHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCEECC DHNTWTLEGDAGAVRLRDWAIAERRGADGRFEPEPDAIPNERLRPITLRRQLEGVVRMAR CCCEEEEECCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC GEPHHLATFAEALDVQEFVEAILAL CCCHHHHHHHHHHCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA