| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is 170751222
Identifier: 170751222
GI number: 170751222
Start: 5169618
End: 5170718
Strand: Reverse
Name: 170751222
Synonym: Mrad2831_4839
Alternate gene names: NA
Gene position: 5170718-5169618 (Counterclockwise)
Preceding gene: 170751230
Following gene: 170751221
Centisome position: 85.08
GC content: 73.57
Gene sequence:
>1101_bases ATGACCGACGCGCCCTCCCGACCGGGCAGCCCCTCCTCCGCCTCCTCGCCCTCCCGGCGGCGCCTGCTGCAGGTCGGCGC CGCGGCCGCGGCCCTGCCGCTCGGCCTCGGCATGGGCACCGGCCGCGCCTGGGCGCCCGGCCCGGGAGCGCCGTTCGATC CCGGCCCGCTCTGCCGGCCCGCCGCCGCGGAGGCGCCCGCGGGCCCACTCCGGACCGTGAAGCTGGCCTGGAACGCCACG GCCATCTGCACGGCGGCCGCGCCGCTCGCCAAGGAGCAGGGGATCTTCGCCCGGCACGGCCTCGACGTGGAGTTCGTCAA TTTCGGCGGCTCGACCGAGGCCCTGCTGGAGGCGATTGCCACGGGCAAGGCCGATGCCGGGATCGGCATGGCCCTGCGCT GGCTCAAGCCCCTGGAGCAGGGCTTCGACGTGAAGATCACCGCGGGGCTGCACGGCGGCTGCCTGCGGCTGCTCAGCGCC AGATCCTCCGGCATCGCCGACATCGCCGGGCTGAAGGGCAAGACCATCGCGATCAGCGACCAGGCGAGCCCGGCCAAGAA CTTCTTCGGCCTGCTGCTCGCCAAGGCGGGGATCGACCCGGAGAGCGGGGTGGAGTGGCGGCAGTACCCGGCCGACCTGC TCAACCTCGCGGTGGAGAAGGGCGAGGCGCAGGCGCTGGCCGATTCCGACCCGCGGACTTGGATCTGGCTGAAGGACCCG CGCTTCACCGAGGTCGCCACCAACCTGTCCGGAGAATACGCCAGCCGGACCTGCTGCGTCGTGGCGGCCCGCGGCAGCCT GATCCGGAACGACCGCGCGGTGGCGCGCGCGCTGACCCGGGCGATCCTGGAGGGTGGCCACGCCGTCCACCGGGATCCCG AGGCGGCGGCCCGGGCGTTCTCCGGCTACGGCGGCAAGGGCTCGATCGCGGATCTCGCCGCGATGCTGCGCAGCCAGCAG CACGGCGATAGCCCGGTCGGCGGGGATCTCAGGCAGCAGCTCGCGCTCTACGGGGACGAGCTGAAGCAGGTGAACGTCCT GCGGCGATCCACCGACACGGCGAAGTTCGCCGAGCGGATCTACGCCGACGTGCTGAGCTGA
Upstream 100 bases:
>100_bases TCATTCCCGAAGACGAGGACGCCAGATCCGCCCGGTCGCGCGACCGGGGCGGTGACGCGCGCCGTTCCCGCCGCGCGGTC GCGCGGCCCGGAGACCCGAG
Downstream 100 bases:
>100_bases GGCGCGCCATGTCCGGAAGCATCGCCGCCGGCGTCGCCCCGCGGGCCGCCGCCCCGTCCCGAAAGCTGCCGCGGCCGCCC TGGCGGATCGTCCTCGCGGG
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NMT1/THI5-Like Protein; Tat Pathway Signal Sequence Domain-Containing Protein; Nitrate Transport Protein NrtA; Lipoprotein
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MTDAPSRPGSPSSASSPSRRRLLQVGAAAAALPLGLGMGTGRAWAPGPGAPFDPGPLCRPAAAEAPAGPLRTVKLAWNAT AICTAAAPLAKEQGIFARHGLDVEFVNFGGSTEALLEAIATGKADAGIGMALRWLKPLEQGFDVKITAGLHGGCLRLLSA RSSGIADIAGLKGKTIAISDQASPAKNFFGLLLAKAGIDPESGVEWRQYPADLLNLAVEKGEAQALADSDPRTWIWLKDP RFTEVATNLSGEYASRTCCVVAARGSLIRNDRAVARALTRAILEGGHAVHRDPEAAARAFSGYGGKGSIADLAAMLRSQQ HGDSPVGGDLRQQLALYGDELKQVNVLRRSTDTAKFAERIYADVLS
Sequences:
>Translated_366_residues MTDAPSRPGSPSSASSPSRRRLLQVGAAAAALPLGLGMGTGRAWAPGPGAPFDPGPLCRPAAAEAPAGPLRTVKLAWNAT AICTAAAPLAKEQGIFARHGLDVEFVNFGGSTEALLEAIATGKADAGIGMALRWLKPLEQGFDVKITAGLHGGCLRLLSA RSSGIADIAGLKGKTIAISDQASPAKNFFGLLLAKAGIDPESGVEWRQYPADLLNLAVEKGEAQALADSDPRTWIWLKDP RFTEVATNLSGEYASRTCCVVAARGSLIRNDRAVARALTRAILEGGHAVHRDPEAAARAFSGYGGKGSIADLAAMLRSQQ HGDSPVGGDLRQQLALYGDELKQVNVLRRSTDTAKFAERIYADVLS >Mature_365_residues TDAPSRPGSPSSASSPSRRRLLQVGAAAAALPLGLGMGTGRAWAPGPGAPFDPGPLCRPAAAEAPAGPLRTVKLAWNATA ICTAAAPLAKEQGIFARHGLDVEFVNFGGSTEALLEAIATGKADAGIGMALRWLKPLEQGFDVKITAGLHGGCLRLLSAR SSGIADIAGLKGKTIAISDQASPAKNFFGLLLAKAGIDPESGVEWRQYPADLLNLAVEKGEAQALADSDPRTWIWLKDPR FTEVATNLSGEYASRTCCVVAARGSLIRNDRAVARALTRAILEGGHAVHRDPEAAARAFSGYGGKGSIADLAAMLRSQQH GDSPVGGDLRQQLALYGDELKQVNVLRRSTDTAKFAERIYADVLS
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38151; Mature: 38020
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAPSRPGSPSSASSPSRRRLLQVGAAAAALPLGLGMGTGRAWAPGPGAPFDPGPLCRP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC AAAEAPAGPLRTVKLAWNATAICTAAAPLAKEQGIFARHGLDVEFVNFGGSTEALLEAIA CCCCCCCCCCEEEEEEECCHHHHHHHCCHHHHCCCHHHCCCCEEEEECCCCHHHHHHHHH TGKADAGIGMALRWLKPLEQGFDVKITAGLHGGCLRLLSARSSGIADIAGLKGKTIAISD CCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCHHHHCCCCCEEEECC QASPAKNFFGLLLAKAGIDPESGVEWRQYPADLLNLAVEKGEAQALADSDPRTWIWLKDP CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCC RFTEVATNLSGEYASRTCCVVAARGSLIRNDRAVARALTRAILEGGHAVHRDPEAAARAF CHHHHHHCCCCCHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH SGYGGKGSIADLAAMLRSQQHGDSPVGGDLRQQLALYGDELKQVNVLRRSTDTAKFAERI HCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH YADVLS HHHHCC >Mature Secondary Structure TDAPSRPGSPSSASSPSRRRLLQVGAAAAALPLGLGMGTGRAWAPGPGAPFDPGPLCRP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC AAAEAPAGPLRTVKLAWNATAICTAAAPLAKEQGIFARHGLDVEFVNFGGSTEALLEAIA CCCCCCCCCCEEEEEEECCHHHHHHHCCHHHHCCCHHHCCCCEEEEECCCCHHHHHHHHH TGKADAGIGMALRWLKPLEQGFDVKITAGLHGGCLRLLSARSSGIADIAGLKGKTIAISD CCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCHHHHCCCCCEEEECC QASPAKNFFGLLLAKAGIDPESGVEWRQYPADLLNLAVEKGEAQALADSDPRTWIWLKDP CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCC RFTEVATNLSGEYASRTCCVVAARGSLIRNDRAVARALTRAILEGGHAVHRDPEAAARAF CHHHHHHCCCCCHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH SGYGGKGSIADLAAMLRSQQHGDSPVGGDLRQQLALYGDELKQVNVLRRSTDTAKFAERI HCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH YADVLS HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA