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The map label for this gene is agmR [H]

Identifier: 170751184

GI number: 170751184

Start: 5126349

End: 5127020

Strand: Reverse

Name: agmR [H]

Synonym: Mrad2831_4801

Alternate gene names: 170751184

Gene position: 5127020-5126349 (Counterclockwise)

Preceding gene: 170751185

Following gene: 170751183

Centisome position: 84.36

GC content: 75.89

Gene sequence:

>672_bases
ATGACGACGACCCGACCGGGCGCCGGCGCCGAGGGCCGCGTCGCGATCCTGGCCGACGACGACGAGTTCTTCCGCCTCGC
CATGGCGTCGCTGCTGTCCCGGCAGCTCGGCTTCGCGCGGGTGATCGAGACGGCGAGCCTGGACGAGGCGCTGGCCGCCC
TCTCGGGGACGCCCGAGACCGCCCTGGCGCTGTTCGACCTGCAGATGCCCGGCATGGCGGGCGCGGGCTCCGTGGCGGCG
GTGCGGGAATGCTACCCGGCGGTCAAGGCCGCCATCGTCTCGGCCTCCACCGCCCGGGCCGACGTGCTGACGGCGCTGGC
CGCCGGCAGCCACGGCTACGTGCCCAAGACCCTCGGGACCGCGGAAGTGCTGCGGGCGGTCTCGGCGATCCTCGACGGCG
CGATCTACGTGCCGCCCTTCATGGCGGACCCGCCGCCCAGCGCGGCCGCGCCGCCGGTCGGCGAGGTGTCGCTGACCCGC
CGGCAGCGGGAGGTGCTCGAACGCATCGTGGCCGGGCGCTCCAACAAGGAGATCGCCCGGGAACTCGATCTCGGCGAGGG
CACCGTGAAGGTGCACGTCGCCGCCCTCCTGCGCACCCTCGGCGTCGCCAACCGGGCGGCCGCGGCGGCCACCGGCCCGC
GGATCCTCGCCGGACTAGGCCGGCCGGCCTAG

Upstream 100 bases:

>100_bases
TCGCCCGCGCCCGCGACCTCGCCGTGGCGGCCGTCGCGGAGACCCGGACGCTGCTCTCCGGCGGCCCCGCGTCCCTCCGG
ACCGCCTCGGGAGCGCGGTG

Downstream 100 bases:

>100_bases
TCCCGGCCGGCCCGTCCACAGCCTGTGGGCATCGCCGGGCCGCGGAGGAATGCCTGCGGGTGCTGCGCGGTCCCGGCGAG
ATCTTGCGGCGTCTACTGGA

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: Protein AgmR [H]

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MTTTRPGAGAEGRVAILADDDEFFRLAMASLLSRQLGFARVIETASLDEALAALSGTPETALALFDLQMPGMAGAGSVAA
VRECYPAVKAAIVSASTARADVLTALAAGSHGYVPKTLGTAEVLRAVSAILDGAIYVPPFMADPPPSAAAPPVGEVSLTR
RQREVLERIVAGRSNKEIARELDLGEGTVKVHVAALLRTLGVANRAAAAATGPRILAGLGRPA

Sequences:

>Translated_223_residues
MTTTRPGAGAEGRVAILADDDEFFRLAMASLLSRQLGFARVIETASLDEALAALSGTPETALALFDLQMPGMAGAGSVAA
VRECYPAVKAAIVSASTARADVLTALAAGSHGYVPKTLGTAEVLRAVSAILDGAIYVPPFMADPPPSAAAPPVGEVSLTR
RQREVLERIVAGRSNKEIARELDLGEGTVKVHVAALLRTLGVANRAAAAATGPRILAGLGRPA
>Mature_222_residues
TTTRPGAGAEGRVAILADDDEFFRLAMASLLSRQLGFARVIETASLDEALAALSGTPETALALFDLQMPGMAGAGSVAAV
RECYPAVKAAIVSASTARADVLTALAAGSHGYVPKTLGTAEVLRAVSAILDGAIYVPPFMADPPPSAAAPPVGEVSLTRR
QREVLERIVAGRSNKEIARELDLGEGTVKVHVAALLRTLGVANRAAAAATGPRILAGLGRPA

Specific function: Positive activator for glycerol metabolism [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790102, Length=188, Percent_Identity=32.9787234042553, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI1788521, Length=159, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1787473, Length=199, Percent_Identity=32.6633165829146, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786747, Length=192, Percent_Identity=25.5208333333333, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789937, Length=162, Percent_Identity=30.2469135802469, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22776; Mature: 22645

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTRPGAGAEGRVAILADDDEFFRLAMASLLSRQLGFARVIETASLDEALAALSGTPET
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ALALFDLQMPGMAGAGSVAAVRECYPAVKAAIVSASTARADVLTALAAGSHGYVPKTLGT
HEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
AEVLRAVSAILDGAIYVPPFMADPPPSAAAPPVGEVSLTRRQREVLERIVAGRSNKEIAR
HHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
ELDLGEGTVKVHVAALLRTLGVANRAAAAATGPRILAGLGRPA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
>Mature Secondary Structure 
TTTRPGAGAEGRVAILADDDEFFRLAMASLLSRQLGFARVIETASLDEALAALSGTPET
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ALALFDLQMPGMAGAGSVAAVRECYPAVKAAIVSASTARADVLTALAAGSHGYVPKTLGT
HEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
AEVLRAVSAILDGAIYVPPFMADPPPSAAAPPVGEVSLTRRQREVLERIVAGRSNKEIAR
HHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
ELDLGEGTVKVHVAALLRTLGVANRAAAAATGPRILAGLGRPA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938886; 10984043 [H]