| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is guaD [H]
Identifier: 170751176
GI number: 170751176
Start: 5113732
End: 5114214
Strand: Reverse
Name: guaD [H]
Synonym: Mrad2831_4793
Alternate gene names: 170751176
Gene position: 5114214-5113732 (Counterclockwise)
Preceding gene: 170751177
Following gene: 170751175
Centisome position: 84.15
GC content: 65.63
Gene sequence:
>483_bases ATGTCTGACAACCACGAGAAGTTCATGGCCCGGGCGATCGCCCTGTCGGAGAAGACGTCACTGGTCGACAGCGCCGGCGG CGTGTTCGGCTGCGTGATCGTCCAGGACGGCGAGATCATCGCCGAGGGCGCCAACCGCGTCGTCGCCGAGAACGACCCGA CCTGGCACGGCGAGATCGAGGCCATCCGGAAGGCCTGCAAGGCGCAGGGCAGCTTCAAGCTCCGGAACGCGACGCTCTAC ACCAGCGCCGAACCCTGCCCGATGTGCATGGCGGCCGCCTACTGGGCCGGCGTCAAGAACGTCTACTACGCGGCGCAGGT CGAAGACGCGCTGGAGTACGGCGGCTTCGACGACAGCATGATCTACGCCGAACTCAAGAAGGATGTCGGCGAGCGCTCCA TCCCGACCCAGCAGATCATGCGCGAGGAGGCCGTCGAGGTCTGGAAGAAGTACGCGCAGAAAGCGGACCGCGTCCCCTAC TGA
Upstream 100 bases:
>100_bases GCGCGGTTCGACACAACAAACGGGATCGCCCCTCGATAAGCAAGTCTCCGCGGTTCACAGTCTCGATCAGCCGACCCGTT TCGCGACGACAGAGGTTCCA
Downstream 100 bases:
>100_bases GGGCCGGATCGCGAGATCGGCCGTCCTGTTCCGCCCGCTCAGGCCCCCTCGCCCGAGCGGGTCTCCCCGCCCGCGCAGTG CCTGGACATGAATGCTGAGA
Product: zinc-binding CMP/dCMP deaminase
Products: NA
Alternate protein names: GDEase; Guanase; Guanine aminase; Guanine aminohydrolase; GAH [H]
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSDNHEKFMARAIALSEKTSLVDSAGGVFGCVIVQDGEIIAEGANRVVAENDPTWHGEIEAIRKACKAQGSFKLRNATLY TSAEPCPMCMAAAYWAGVKNVYYAAQVEDALEYGGFDDSMIYAELKKDVGERSIPTQQIMREEAVEVWKKYAQKADRVPY
Sequences:
>Translated_160_residues MSDNHEKFMARAIALSEKTSLVDSAGGVFGCVIVQDGEIIAEGANRVVAENDPTWHGEIEAIRKACKAQGSFKLRNATLY TSAEPCPMCMAAAYWAGVKNVYYAAQVEDALEYGGFDDSMIYAELKKDVGERSIPTQQIMREEAVEVWKKYAQKADRVPY >Mature_159_residues SDNHEKFMARAIALSEKTSLVDSAGGVFGCVIVQDGEIIAEGANRVVAENDPTWHGEIEAIRKACKAQGSFKLRNATLYT SAEPCPMCMAAAYWAGVKNVYYAAQVEDALEYGGFDDSMIYAELKKDVGERSIPTQQIMREEAVEVWKKYAQKADRVPY
Specific function: Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia [H]
COG id: COG0590
COG function: function code FJ; Cytosine/adenosine deaminases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]
Homologues:
Organism=Escherichia coli, GI145693172, Length=103, Percent_Identity=33.9805825242718, Blast_Score=69, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17554608, Length=154, Percent_Identity=37.012987012987, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17555996, Length=162, Percent_Identity=35.8024691358025, Blast_Score=104, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17541138, Length=102, Percent_Identity=36.2745098039216, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016192 - InterPro: IPR002125 - InterPro: IPR016193 [H]
Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]
EC number: =3.5.4.3 [H]
Molecular weight: Translated: 17696; Mature: 17565
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNHEKFMARAIALSEKTSLVDSAGGVFGCVIVQDGEIIAEGANRVVAENDPTWHGEIE CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCEEEECCCCCCCCHHH AIRKACKAQGSFKLRNATLYTSAEPCPMCMAAAYWAGVKNVYYAAQVEDALEYGGFDDSM HHHHHHHCCCCEEEECEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH IYAELKKDVGERSIPTQQIMREEAVEVWKKYAQKADRVPY HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDNHEKFMARAIALSEKTSLVDSAGGVFGCVIVQDGEIIAEGANRVVAENDPTWHGEIE CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCEEEECCCCCCCCHHH AIRKACKAQGSFKLRNATLYTSAEPCPMCMAAAYWAGVKNVYYAAQVEDALEYGGFDDSM HHHHHHHCCCCEEEECEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH IYAELKKDVGERSIPTQQIMREEAVEVWKKYAQKADRVPY HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 11101664 [H]