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The map label for this gene is glcD [C]

Identifier: 170751175

GI number: 170751175

Start: 5112256

End: 5113644

Strand: Reverse

Name: glcD [C]

Synonym: Mrad2831_4792

Alternate gene names: 170751175

Gene position: 5113644-5112256 (Counterclockwise)

Preceding gene: 170751176

Following gene: 170751173

Centisome position: 84.14

GC content: 70.12

Gene sequence:

>1389_bases
ATGAATGCTGAGAGCCTGAGGACGGTCTGCAGAGGCCCGGTCATCGACGCGGGCGACCCGCAGTTCCGGGACGCCCTTCA
CGGGAACCTGTGGAACAGACTGATCCCGGACCGGGCACCGCAGATGATCGTCAAGGCGGCCGACGAGGACGACATCGTCG
CCACGGTGACGTTCGCCCGCGCGCACGGCCTCAAGGTGGTCGTCCGCGGCGGCGGCCACAATTGGTGCCAGCCGACCCTG
CGCAACGGCGGGATCCTGATCGACCTCGGGAGCCTCGACAAGATCCTGGCGATCGACGTCGCGCAGCGCCGGGCCGTCAT
CCAGCCCATTCTCAGCAACCGCGACATCCAGAAGGCGCTCAACGGCCACGGCCTCGCCTTCCCGACCGGCCACTGTCCTC
AGGTCAAGGCCAGCGGCTACTTCCTCGGCGGCGGCATGGCCTGGAACCCCACGGTCTGGGGCTACGGGACCGAGAGCCTC
GAGGCGATCGAGCTCGTCACCGCCCAGGGCGACTTGATCCGGGCCAGCGAGACCGAGAACCCGGACTTCTTCTGGGCCGC
GCGCGGCGCAGGCCCGGGCTTCTTCGGGATCGTCACGAAGTATTTCCTCAAGCTCCACGCGCTGCCGAAAGCCATTCACG
GGAGCGAGTCCTTCTATCGCCTCGAGGACGCGCCGGCCATCGGCAGGTGGCTCGGCGAGGCGGCGCCGACGATCGCGCCG
AGCGTCGAGCTGACCCAGTTCCTCGTCAAGGCGCCGCCCGCGCTGGCCGAGCAGGCGGCGGCCCAGAACGGCTGGGTCTG
CATGGTCACCGCCACCGCCTTCGAAGACACACCGGAGGCGGCGCGGCGCGCGCTGGCGCCGCTGGACGGCGCACCGGTCG
CGCCCCTGTCGCGCGCGCGGGCGACGCCCCTCGACTTCGAGCAGCTCTTCGACGCGTCCGGCGCGCTCTTCCCGGAGGGC
GTGCGCTCCCGGGTCGAGGCCACCTACTCCAATCACTGCCCCGGCGCGCTGATGGCCGCCATCCTGCCCCTGTGGCGGAG
CGCGCCTTCGGCGACCTCGGTGTTCCTGTCGACGATCTTCTGCGGGCCCGACGTCCCGGGGCCGCAGCGGGACATGGCCC
GCTCCATGACCTCGAAGGTCTACGGCGGCCCCTGGACCATGTGGCGCGAGGCGGACGACGACCAGGCCAACGCCGCGTGG
CATCAGGCGGTGATCGCCGCGCTGAAGCCGTTCAACATCGGCTACTACATCGGCGAGACCGACACGGTCGAGCAGCCCGA
GATCGTCGCCCAGGCGTTCACGCCCGAGAAGTGGCAGAGGCTGTGCGCGCTGCGCGACAAGCACGATCCGGACCGCGTGT
TCTTCGACTACTTCGACGGTCTCCGCTGA

Upstream 100 bases:

>100_bases
CGTCCCCTACTGAGGGCCGGATCGCGAGATCGGCCGTCCTGTTCCGCCCGCTCAGGCCCCCTCGCCCGAGCGGGTCTCCC
CGCCCGCGCAGTGCCTGGAC

Downstream 100 bases:

>100_bases
GCCGAGGTGCGGTCACGTCGGCGTGTCGATCGCGTCCCACGGCGTGTCGCGGTCGTTCTGGAAGCCGGTCAGCCAGTTCA
GCGCGACGTGACGCTCCGCC

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: 6-HDNO [H]

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MNAESLRTVCRGPVIDAGDPQFRDALHGNLWNRLIPDRAPQMIVKAADEDDIVATVTFARAHGLKVVVRGGGHNWCQPTL
RNGGILIDLGSLDKILAIDVAQRRAVIQPILSNRDIQKALNGHGLAFPTGHCPQVKASGYFLGGGMAWNPTVWGYGTESL
EAIELVTAQGDLIRASETENPDFFWAARGAGPGFFGIVTKYFLKLHALPKAIHGSESFYRLEDAPAIGRWLGEAAPTIAP
SVELTQFLVKAPPALAEQAAAQNGWVCMVTATAFEDTPEAARRALAPLDGAPVAPLSRARATPLDFEQLFDASGALFPEG
VRSRVEATYSNHCPGALMAAILPLWRSAPSATSVFLSTIFCGPDVPGPQRDMARSMTSKVYGGPWTMWREADDDQANAAW
HQAVIAALKPFNIGYYIGETDTVEQPEIVAQAFTPEKWQRLCALRDKHDPDRVFFDYFDGLR

Sequences:

>Translated_462_residues
MNAESLRTVCRGPVIDAGDPQFRDALHGNLWNRLIPDRAPQMIVKAADEDDIVATVTFARAHGLKVVVRGGGHNWCQPTL
RNGGILIDLGSLDKILAIDVAQRRAVIQPILSNRDIQKALNGHGLAFPTGHCPQVKASGYFLGGGMAWNPTVWGYGTESL
EAIELVTAQGDLIRASETENPDFFWAARGAGPGFFGIVTKYFLKLHALPKAIHGSESFYRLEDAPAIGRWLGEAAPTIAP
SVELTQFLVKAPPALAEQAAAQNGWVCMVTATAFEDTPEAARRALAPLDGAPVAPLSRARATPLDFEQLFDASGALFPEG
VRSRVEATYSNHCPGALMAAILPLWRSAPSATSVFLSTIFCGPDVPGPQRDMARSMTSKVYGGPWTMWREADDDQANAAW
HQAVIAALKPFNIGYYIGETDTVEQPEIVAQAFTPEKWQRLCALRDKHDPDRVFFDYFDGLR
>Mature_462_residues
MNAESLRTVCRGPVIDAGDPQFRDALHGNLWNRLIPDRAPQMIVKAADEDDIVATVTFARAHGLKVVVRGGGHNWCQPTL
RNGGILIDLGSLDKILAIDVAQRRAVIQPILSNRDIQKALNGHGLAFPTGHCPQVKASGYFLGGGMAWNPTVWGYGTESL
EAIELVTAQGDLIRASETENPDFFWAARGAGPGFFGIVTKYFLKLHALPKAIHGSESFYRLEDAPAIGRWLGEAAPTIAP
SVELTQFLVKAPPALAEQAAAQNGWVCMVTATAFEDTPEAARRALAPLDGAPVAPLSRARATPLDFEQLFDASGALFPEG
VRSRVEATYSNHCPGALMAAILPLWRSAPSATSVFLSTIFCGPDVPGPQRDMARSMTSKVYGGPWTMWREADDDQANAAW
HQAVIAALKPFNIGYYIGETDTVEQPEIVAQAFTPEKWQRLCALRDKHDPDRVFFDYFDGLR

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094
- InterPro:   IPR006093 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: =1.5.3.6 [H]

Molecular weight: Translated: 50214; Mature: 50214

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS00862 OX2_COVAL_FAD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAESLRTVCRGPVIDAGDPQFRDALHGNLWNRLIPDRAPQMIVKAADEDDIVATVTFAR
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCEEEEEEEEH
AHGLKVVVRGGGHNWCQPTLRNGGILIDLGSLDKILAIDVAQRRAVIQPILSNRDIQKAL
HCCEEEEEECCCCCCCCCHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
NGHGLAFPTGHCPQVKASGYFLGGGMAWNPTVWGYGTESLEAIELVTAQGDLIRASETEN
CCCCCCCCCCCCCCCCCCCEEEECCEEECCEEECCCCCCHHHEEEEECCCCEEECCCCCC
PDFFWAARGAGPGFFGIVTKYFLKLHALPKAIHGSESFYRLEDAPAIGRWLGEAAPTIAP
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCC
SVELTQFLVKAPPALAEQAAAQNGWVCMVTATAFEDTPEAARRALAPLDGAPVAPLSRAR
CHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHCC
ATPLDFEQLFDASGALFPEGVRSRVEATYSNHCPGALMAAILPLWRSAPSATSVFLSTIF
CCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
CGPDVPGPQRDMARSMTSKVYGGPWTMWREADDDQANAAWHQAVIAALKPFNIGYYIGET
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCC
DTVEQPEIVAQAFTPEKWQRLCALRDKHDPDRVFFDYFDGLR
CCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MNAESLRTVCRGPVIDAGDPQFRDALHGNLWNRLIPDRAPQMIVKAADEDDIVATVTFAR
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCEEEEEEEEH
AHGLKVVVRGGGHNWCQPTLRNGGILIDLGSLDKILAIDVAQRRAVIQPILSNRDIQKAL
HCCEEEEEECCCCCCCCCHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
NGHGLAFPTGHCPQVKASGYFLGGGMAWNPTVWGYGTESLEAIELVTAQGDLIRASETEN
CCCCCCCCCCCCCCCCCCCEEEECCEEECCEEECCCCCCHHHEEEEECCCCEEECCCCCC
PDFFWAARGAGPGFFGIVTKYFLKLHALPKAIHGSESFYRLEDAPAIGRWLGEAAPTIAP
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCC
SVELTQFLVKAPPALAEQAAAQNGWVCMVTATAFEDTPEAARRALAPLDGAPVAPLSRAR
CHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHCC
ATPLDFEQLFDASGALFPEGVRSRVEATYSNHCPGALMAAILPLWRSAPSATSVFLSTIF
CCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
CGPDVPGPQRDMARSMTSKVYGGPWTMWREADDDQANAAWHQAVIAALKPFNIGYYIGET
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCC
DTVEQPEIVAQAFTPEKWQRLCALRDKHDPDRVFFDYFDGLR
CCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3622516; 2680607; 2115879 [H]