| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yuxL [H]
Identifier: 170751156
GI number: 170751156
Start: 5086907
End: 5088805
Strand: Reverse
Name: yuxL [H]
Synonym: Mrad2831_4772
Alternate gene names: 170751156
Gene position: 5088805-5086907 (Counterclockwise)
Preceding gene: 170751158
Following gene: 170751151
Centisome position: 83.73
GC content: 66.72
Gene sequence:
>1899_bases ATGCAAGGCGATCTGATCCCACGGCGCATCCTGTTCGGAAATCCCGAGCGTGCCTTTCGGCAAATCAGCCCGGACGGCGA GTGGTTGACCTGGGTCGCACCCGCCAATGGGGTGATGAACATTTTCATCGCGCCGCGCGCGACTCCCGACCGCGCTCGGC AGCTGACCTTCGATCAGGGCCGCGGCGTCACCGCCTACTGCTGGACGATGGGTGCGACGCATCTTGTCTACGGCCAGGAC ACTGACGGCGACGAAAACACCCGCCTCTACGCGCTGAACATCGCCGACGGGAGCGTGCGCAACCTGACGCCCGAACCCGA TGTGAAGGCGAACCTCGGCGGTGTGAGTCGCAAGATCCGCGACATGATCATGGTCTATCTCAACGACCGGGATCCGCGGT TTCACGATCTATACGCGATCAACCCGGCAACAGGCGAGCGGCGCAAGCTCGCTGACAATCCCGGCTTTGCCGACATCATG GTCGACGCGGCGTTCCGGCCGACCCTCGCGGTCGCCCTGCACCCGAACGGCGAGATGCACCTGCTGCGCAATGCACGCGC CGAGGGGCCACCCGCGCCCGAGGACTGGCAGCCGTGGCAGACCATCCCCCGCGAGGATGCACGCACCACGTTCCCGCTCC ACCTGAGCGCCGATGGGTCGATCCTCTACATGGCCGACAGCCGCGGTCGCGACACCGCCGCGCTCAGCGCGATCACCCTC GCCACGGGTGAGCGGACCCTGATTGCGAGCGACCCGCGGGCCGACATCACCGAGACCTTCACCGACGCCGAGACGCAGGA GATCCTGGGCTACGGCGTCTCCTACCTCGTTCGCGAGTTCCATACGGTCGATCCGCGCGCCGGCGATTTCGCGTGGCTGG CAGATCAAGGCCTCGAGAACCCCGTCGTGGTCGGTCGCACCGAGGCCGACGACATCTGGCTCGTCGGGACCTATTCCGAC GTCTCCCCGGGCGAGGTCTTCGTGTTCGACCGGCCGAACCGCACGCTCACGCGGCTGCCGCCAAGCTCGCCAGAGCTGGC AGCGGCAGGTCTCCGTCCGATGGAGCCGCACACGATCCCGACCCGGGACGGGCTGAACTTGATCTCGTACGCGACCCTGC CGGAACGCGCGGGCCCGAGTGAGCGCGTTCCGCTCGTGCTCGTCGTCCACGGCGGCCCCACGGCCCGTGACGAGTTCGGT TGCAACCGGGAGCATCAATGGCTTGCCAATCGCGGTTACGCTGCGCTCAGCGTCAACTTCCGCGGCTCTGCCGGATTCGG GAAGGCGTTCGTCAACGCCGCCGAGGGTGAGTGGGGGCGGCGGATGGACGACGACCTCATCGAGGCCGTGACTTGGGCCA AGGATAACCTGCCCATCGATCCGAGCCGGATCGCCATCTACGGCGCGTCCTACGGCGGCTACGCTACCCTCGTCGGGCTC ACCCGAAACCCGGATCTCTACGCCTGCGGTGTCGACATCGTCGGACCGTCGAACTTGGAGACCTTACTAGAGACGATTCC TCCTTACTGGGAGGCGGGCCGCCATCAGTTGAAGCGGATGATCGGTGACCCGGACACCGCCGAGGGCCTGGCACGCCTGC GAGATCGCTCGCCGCTTCATCAGGCGGACCGCATTCGCCGGCCGCTCATGATCGCGCAGGGCGCCAACGATCCGCGGGTG AAGCGGGCAGAGAGCGACCAGATGGTCGCGGCCCTGCGCAGCAAGGCCATCCCTGTCACCTATCTGCTGTTCCCCGACGA GGGACACGGGTTCGAGCGGCCGGAGAACACTCTTAGCTTCTATGCCCAGGCCGAGGCGTTCCTGGCTGCGCATCTTGGCG GCCGCTGTGAGCCGGACGATCCCATGACCCGGGACCGCAGCAGCATGCAAATCCTCTGA
Upstream 100 bases:
>100_bases CGCGCCACAATCGCCACACGATTATCCTCACGTCAGCGTACAGTAGATCTCTATTTACCGGTCGAGAACAAATCCCTCTT CCTCCATCGAAGGCTCTCAA
Downstream 100 bases:
>100_bases TCGCGCCGCCGAGCCGTCACCGAGGCCGGCGATGGTCTCAACAGCATCGCCGGATCCCTCGCGAGGGCACGAGCGGTTGA CTGAACCATCGTGTGTCCGC
Product: peptidase S9 prolyl oligopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 632; Mature: 632
Protein sequence:
>632_residues MQGDLIPRRILFGNPERAFRQISPDGEWLTWVAPANGVMNIFIAPRATPDRARQLTFDQGRGVTAYCWTMGATHLVYGQD TDGDENTRLYALNIADGSVRNLTPEPDVKANLGGVSRKIRDMIMVYLNDRDPRFHDLYAINPATGERRKLADNPGFADIM VDAAFRPTLAVALHPNGEMHLLRNARAEGPPAPEDWQPWQTIPREDARTTFPLHLSADGSILYMADSRGRDTAALSAITL ATGERTLIASDPRADITETFTDAETQEILGYGVSYLVREFHTVDPRAGDFAWLADQGLENPVVVGRTEADDIWLVGTYSD VSPGEVFVFDRPNRTLTRLPPSSPELAAAGLRPMEPHTIPTRDGLNLISYATLPERAGPSERVPLVLVVHGGPTARDEFG CNREHQWLANRGYAALSVNFRGSAGFGKAFVNAAEGEWGRRMDDDLIEAVTWAKDNLPIDPSRIAIYGASYGGYATLVGL TRNPDLYACGVDIVGPSNLETLLETIPPYWEAGRHQLKRMIGDPDTAEGLARLRDRSPLHQADRIRRPLMIAQGANDPRV KRAESDQMVAALRSKAIPVTYLLFPDEGHGFERPENTLSFYAQAEAFLAAHLGGRCEPDDPMTRDRSSMQIL
Sequences:
>Translated_632_residues MQGDLIPRRILFGNPERAFRQISPDGEWLTWVAPANGVMNIFIAPRATPDRARQLTFDQGRGVTAYCWTMGATHLVYGQD TDGDENTRLYALNIADGSVRNLTPEPDVKANLGGVSRKIRDMIMVYLNDRDPRFHDLYAINPATGERRKLADNPGFADIM VDAAFRPTLAVALHPNGEMHLLRNARAEGPPAPEDWQPWQTIPREDARTTFPLHLSADGSILYMADSRGRDTAALSAITL ATGERTLIASDPRADITETFTDAETQEILGYGVSYLVREFHTVDPRAGDFAWLADQGLENPVVVGRTEADDIWLVGTYSD VSPGEVFVFDRPNRTLTRLPPSSPELAAAGLRPMEPHTIPTRDGLNLISYATLPERAGPSERVPLVLVVHGGPTARDEFG CNREHQWLANRGYAALSVNFRGSAGFGKAFVNAAEGEWGRRMDDDLIEAVTWAKDNLPIDPSRIAIYGASYGGYATLVGL TRNPDLYACGVDIVGPSNLETLLETIPPYWEAGRHQLKRMIGDPDTAEGLARLRDRSPLHQADRIRRPLMIAQGANDPRV KRAESDQMVAALRSKAIPVTYLLFPDEGHGFERPENTLSFYAQAEAFLAAHLGGRCEPDDPMTRDRSSMQIL >Mature_632_residues MQGDLIPRRILFGNPERAFRQISPDGEWLTWVAPANGVMNIFIAPRATPDRARQLTFDQGRGVTAYCWTMGATHLVYGQD TDGDENTRLYALNIADGSVRNLTPEPDVKANLGGVSRKIRDMIMVYLNDRDPRFHDLYAINPATGERRKLADNPGFADIM VDAAFRPTLAVALHPNGEMHLLRNARAEGPPAPEDWQPWQTIPREDARTTFPLHLSADGSILYMADSRGRDTAALSAITL ATGERTLIASDPRADITETFTDAETQEILGYGVSYLVREFHTVDPRAGDFAWLADQGLENPVVVGRTEADDIWLVGTYSD VSPGEVFVFDRPNRTLTRLPPSSPELAAAGLRPMEPHTIPTRDGLNLISYATLPERAGPSERVPLVLVVHGGPTARDEFG CNREHQWLANRGYAALSVNFRGSAGFGKAFVNAAEGEWGRRMDDDLIEAVTWAKDNLPIDPSRIAIYGASYGGYATLVGL TRNPDLYACGVDIVGPSNLETLLETIPPYWEAGRHQLKRMIGDPDTAEGLARLRDRSPLHQADRIRRPLMIAQGANDPRV KRAESDQMVAALRSKAIPVTYLLFPDEGHGFERPENTLSFYAQAEAFLAAHLGGRCEPDDPMTRDRSSMQIL
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI23510451, Length=236, Percent_Identity=28.3898305084746, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI16933540, Length=233, Percent_Identity=25.7510729613734, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI18450280, Length=272, Percent_Identity=25.7352941176471, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI37577089, Length=272, Percent_Identity=25.7352941176471, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI18765694, Length=240, Percent_Identity=24.5833333333333, Blast_Score=71, Evalue=3e-12, Organism=Caenorhabditis elegans, GI25144537, Length=660, Percent_Identity=35.6060606060606, Blast_Score=393, Evalue=1e-109, Organism=Caenorhabditis elegans, GI25144540, Length=442, Percent_Identity=37.3303167420815, Blast_Score=291, Evalue=6e-79, Organism=Caenorhabditis elegans, GI25144543, Length=552, Percent_Identity=32.2463768115942, Blast_Score=281, Evalue=6e-76, Organism=Caenorhabditis elegans, GI17552908, Length=255, Percent_Identity=29.8039215686275, Blast_Score=105, Evalue=1e-22, Organism=Caenorhabditis elegans, GI25149159, Length=302, Percent_Identity=28.476821192053, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI45550825, Length=236, Percent_Identity=27.5423728813559, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI45553511, Length=236, Percent_Identity=27.5423728813559, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI45551969, Length=236, Percent_Identity=27.5423728813559, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24582257, Length=215, Percent_Identity=23.7209302325581, Blast_Score=76, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 69772; Mature: 69772
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGDLIPRRILFGNPERAFRQISPDGEWLTWVAPANGVMNIFIAPRATPDRARQLTFDQG CCCCCCCHHEEECCHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHEEECCCC RGVTAYCWTMGATHLVYGQDTDGDENTRLYALNIADGSVRNLTPEPDVKANLGGVSRKIR CCCEEEEEECCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH DMIMVYLNDRDPRFHDLYAINPATGERRKLADNPGFADIMVDAAFRPTLAVALHPNGEMH EEEEEEECCCCCCEEEEEEECCCCCCCHHCCCCCCCEEEEEECCCCCEEEEEECCCCCEE LLRNARAEGPPAPEDWQPWQTIPREDARTTFPLHLSADGSILYMADSRGRDTAALSAITL EEECCCCCCCCCCCCCCCHHCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCHHEEEEEE ATGERTLIASDPRADITETFTDAETQEILGYGVSYLVREFHTVDPRAGDFAWLADQGLEN ECCCEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHCCCCC PVVVGRTEADDIWLVGTYSDVSPGEVFVFDRPNRTLTRLPPSSPELAAAGLRPMEPHTIP CEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCEEEECCCCCCCHHHCCCCCCCCCCCC TRDGLNLISYATLPERAGPSERVPLVLVVHGGPTARDEFGCNREHQWLANRGYAALSVNF CCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHCCCCCCHHHHHCCCEEEEEEEE RGSAGFGKAFVNAAEGEWGRRMDDDLIEAVTWAKDNLPIDPSRIAIYGASYGGYATLVGL CCCCCCCHHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEE TRNPDLYACGVDIVGPSNLETLLETIPPYWEAGRHQLKRMIGDPDTAEGLARLRDRSPLH ECCCCEEEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH QADRIRRPLMIAQGANDPRVKRAESDQMVAALRSKAIPVTYLLFPDEGHGFERPENTLSF HHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHH YAQAEAFLAAHLGGRCEPDDPMTRDRSSMQIL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQGDLIPRRILFGNPERAFRQISPDGEWLTWVAPANGVMNIFIAPRATPDRARQLTFDQG CCCCCCCHHEEECCHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHEEECCCC RGVTAYCWTMGATHLVYGQDTDGDENTRLYALNIADGSVRNLTPEPDVKANLGGVSRKIR CCCEEEEEECCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH DMIMVYLNDRDPRFHDLYAINPATGERRKLADNPGFADIMVDAAFRPTLAVALHPNGEMH EEEEEEECCCCCCEEEEEEECCCCCCCHHCCCCCCCEEEEEECCCCCEEEEEECCCCCEE LLRNARAEGPPAPEDWQPWQTIPREDARTTFPLHLSADGSILYMADSRGRDTAALSAITL EEECCCCCCCCCCCCCCCHHCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCHHEEEEEE ATGERTLIASDPRADITETFTDAETQEILGYGVSYLVREFHTVDPRAGDFAWLADQGLEN ECCCEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHCCCCC PVVVGRTEADDIWLVGTYSDVSPGEVFVFDRPNRTLTRLPPSSPELAAAGLRPMEPHTIP CEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCEEEECCCCCCCHHHCCCCCCCCCCCC TRDGLNLISYATLPERAGPSERVPLVLVVHGGPTARDEFGCNREHQWLANRGYAALSVNF CCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHCCCCCCHHHHHCCCEEEEEEEE RGSAGFGKAFVNAAEGEWGRRMDDDLIEAVTWAKDNLPIDPSRIAIYGASYGGYATLVGL CCCCCCCHHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEE TRNPDLYACGVDIVGPSNLETLLETIPPYWEAGRHQLKRMIGDPDTAEGLARLRDRSPLH ECCCCEEEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH QADRIRRPLMIAQGANDPRVKRAESDQMVAALRSKAIPVTYLLFPDEGHGFERPENTLSF HHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHH YAQAEAFLAAHLGGRCEPDDPMTRDRSSMQIL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]