| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751136
Identifier: 170751136
GI number: 170751136
Start: 5061208
End: 5063472
Strand: Direct
Name: 170751136
Synonym: Mrad2831_4752
Alternate gene names: NA
Gene position: 5061208-5063472 (Clockwise)
Preceding gene: 170751135
Following gene: 170751137
Centisome position: 83.27
GC content: 63.84
Gene sequence:
>2265_bases ATGACCCCCCGCTATCGGATCAACGAAGCCGACCGTCTGATCCTCGGCGGCGGCCAGACTCTGACGTGCAAGGGCCTGAC GAAGACCGGCTACCTTCTGCAGCCTTTCGGCACGGACCTGACCGACCATATCAGCTTCAAAGATTTCGAGGAGGCCCGGC AGCACCCGGATTTTCGTCATCGACCCCTATACTACTCCGAGCCTCGCGCCCGCGCTCGCGCGCGCACGCTCATTGAAAGC AACGACGACATCCCTGCCGAGGAACTCCCGGACGTACGCTGGCGGGAAACCTGTGTGCTTGCCTTCCACGATGAGGAGGC CAAGGATCTTCGCAATCCTCCGCCGCCGGATCAGCAGAGGGTCAACCGGACCAAGGCCGGCTTCGAAGAGGCGATGCGGC GCGCCAGGCCGCAACTGATGCAACTCGATTGCGCCAAAAAGGCCGCGGCCAAGGAGGCGGCGCAGTCGCGTCCGAGCTTG GCCAAGTCCGGCATGCGTCGGAAGATTCGAGCGGGCCGCGCCGTCGTCTTCCGCTCACTACCCGGCGCGAAGACGCTGCA GCGCTGGACCCTGGCCTATGAGGAGGCCGGCTGTGAAGCCTGGGGCTTGCGTCAGTGTCACTGCAACAGCGGCAACTACA AACCCCGGTTCACAGCGGACGAGCACACGATGATGATGGAGGCGGTCTACGCCTACCTCGATCGGAAGCGTCCAACATTA GAGCAGTGCTACAAGGATTACGGAGACAAACTCATTGAGGAGAATAACAAGCGCGCGGAGAATGGGCAGCCGCCGCTGCG GAGGATCGGTGCCTCGACGTACCGCGCCAGGGTGAAGCGCGTCTCTAGGTTCCATCGGGACGCTGCGCGGCACGGCATCG AGTACGCCATCCGCAAGAATGGGGGCGTCCGGCGGAAATTCGACGTCACCCGCATCGGCGAACGTGTCGAGATCGACGGC TGCAAGGTGTCGTTGATCCACATGGCTGCCGAGAGCGGCATCTGGGCTAAGATGACGGCCGAGCAGAAGCACAAGGTGCC GAAGGAGCGCTGGATCCTGCTTCGAGCTATCGACGTCGCCTCGAAATGCATCCTGGCGGAGGTCATCACCCCGACCGAGA CGACCAAGGCCGCCGCCGTCCTCTTGCGTATGATGATCAGCGACAAGACCCCCCTCGCTGCGGCGATGGGAGCCAAGACG CCTTGGAACTACGCCTGCGTCCCGCACTCGATCGCGACGGACGGCGGAGCTGCGTTCCGGTCGGACCAATTCCGCCAGAT GCTAGCCGATCTCGGCATCATCTTCGTCGCCCCCCAGGTCGGTCAGCCGAATAAACGCGCGACTGTGGAGCGCTCATTCG GCACGACTCGTACGCAGTTCCTGCAGCACTTCAGCGGGCAGACGTTTGCGAACGTCAGCGATAAGGGGGACTACGATCCG GGCAAGAATGCCAGCCTCTTCGTGGACGAGTTGGCTCGCGCGCTCGTGCTGTATGACGTCGACATCTACCACAACACTCC TCACGAGGGCTTGCATGGCGAGACGCCTCGGGCTTGTTGGCAGCGCCTAATGATCGAGAGCGGATGCTCTCGTATAACCC CAGGCGCTCATCAGCAACGAGCGATCTTCGGCGTCCACCTCAGCCGCAAGCTTAGCAAGAGGGGCATCCGCATCCTCGGC CTACACTATCAGTCCGAAGACCTAGCGGCACTCCTCGCGGAGAAGGGGGAGATCGACCTGCCCGTGCGGATCGATCCGGA CGACCTCGGCTGGATCTCGGTTCAGATCAGTCGCACATGGAAGACCATTCCCTGTGCAACCTCCAGCCTTCAGGGGGCCT CGATTCAGGCGTGGTTGAGCGTCGTCGAGGACCAGCGGCGACGGTACGACATCGCCGCTGCGGCGAGCCGCCCGGTCATC GCCGATGCCCTGCGGCAGATCCGAGCTATCGCCGCCAAGGCCGAGCGCCGCTTCGGGATCTCACCCCATACCTACGATGC CGAGGCGATCTCCCGGGCGGAGGCCGAGATGCTGCGGGGGTTCGACGTCCCCGAGGAACGGACACTGCAGAACGCCGTCC CGGGCGGTGATCCGTTGGCGCAAGGCATCCCGGTCACCGGGCCGACGCCGTCGCGGAAAAAGCGCAGCGCGACACTCCAC GAGCCGGGTCTCACAACGGATCCAACCCCAGACGCGCCGCCCCCGTCTCAGAACAGTGAGGACGACGATGGCGACGGGTG GACCATGGAGACGCCCAATGTCTGA
Upstream 100 bases:
>100_bases CGATCATCCGTCTGATCGGCTCCGGGGAGATCGTCATGCAAGGCACCGCCCGGATCGGCGGTCAGACCCTCATCCGCTTG GCCAACCGGGAGGACACGCG
Downstream 100 bases:
>100_bases TATGCAAGACGATCCCCGCGACCATTTCCGGAAGATCTTCTCCGCGCAGGATCTGCAGCGGATCGAAGTGATGCAGCGGG TGCGCGGGACTTATTTCCGC
Product: integrase catalytic subunit
Products: NA
Alternate protein names: Transposase; Integrase Catalytic Region; TniA Transposase; Integrase; Integrase Catalytic Domain; Transposase-Like Mu; Plasmid Replication Initiator Protein-Like Protein; Transposase OrfA; TniA-Like Transposition Protein; Transposase TniA For Transposition Module Tni; Transposase-Related Protein; Transposase Related Protein; Transposase-Like Protein; TniA Protein; Integrase/Transposase
Number of amino acids: Translated: 754; Mature: 753
Protein sequence:
>754_residues MTPRYRINEADRLILGGGQTLTCKGLTKTGYLLQPFGTDLTDHISFKDFEEARQHPDFRHRPLYYSEPRARARARTLIES NDDIPAEELPDVRWRETCVLAFHDEEAKDLRNPPPPDQQRVNRTKAGFEEAMRRARPQLMQLDCAKKAAAKEAAQSRPSL AKSGMRRKIRAGRAVVFRSLPGAKTLQRWTLAYEEAGCEAWGLRQCHCNSGNYKPRFTADEHTMMMEAVYAYLDRKRPTL EQCYKDYGDKLIEENNKRAENGQPPLRRIGASTYRARVKRVSRFHRDAARHGIEYAIRKNGGVRRKFDVTRIGERVEIDG CKVSLIHMAAESGIWAKMTAEQKHKVPKERWILLRAIDVASKCILAEVITPTETTKAAAVLLRMMISDKTPLAAAMGAKT PWNYACVPHSIATDGGAAFRSDQFRQMLADLGIIFVAPQVGQPNKRATVERSFGTTRTQFLQHFSGQTFANVSDKGDYDP GKNASLFVDELARALVLYDVDIYHNTPHEGLHGETPRACWQRLMIESGCSRITPGAHQQRAIFGVHLSRKLSKRGIRILG LHYQSEDLAALLAEKGEIDLPVRIDPDDLGWISVQISRTWKTIPCATSSLQGASIQAWLSVVEDQRRRYDIAAAASRPVI ADALRQIRAIAAKAERRFGISPHTYDAEAISRAEAEMLRGFDVPEERTLQNAVPGGDPLAQGIPVTGPTPSRKKRSATLH EPGLTTDPTPDAPPPSQNSEDDDGDGWTMETPNV
Sequences:
>Translated_754_residues MTPRYRINEADRLILGGGQTLTCKGLTKTGYLLQPFGTDLTDHISFKDFEEARQHPDFRHRPLYYSEPRARARARTLIES NDDIPAEELPDVRWRETCVLAFHDEEAKDLRNPPPPDQQRVNRTKAGFEEAMRRARPQLMQLDCAKKAAAKEAAQSRPSL AKSGMRRKIRAGRAVVFRSLPGAKTLQRWTLAYEEAGCEAWGLRQCHCNSGNYKPRFTADEHTMMMEAVYAYLDRKRPTL EQCYKDYGDKLIEENNKRAENGQPPLRRIGASTYRARVKRVSRFHRDAARHGIEYAIRKNGGVRRKFDVTRIGERVEIDG CKVSLIHMAAESGIWAKMTAEQKHKVPKERWILLRAIDVASKCILAEVITPTETTKAAAVLLRMMISDKTPLAAAMGAKT PWNYACVPHSIATDGGAAFRSDQFRQMLADLGIIFVAPQVGQPNKRATVERSFGTTRTQFLQHFSGQTFANVSDKGDYDP GKNASLFVDELARALVLYDVDIYHNTPHEGLHGETPRACWQRLMIESGCSRITPGAHQQRAIFGVHLSRKLSKRGIRILG LHYQSEDLAALLAEKGEIDLPVRIDPDDLGWISVQISRTWKTIPCATSSLQGASIQAWLSVVEDQRRRYDIAAAASRPVI ADALRQIRAIAAKAERRFGISPHTYDAEAISRAEAEMLRGFDVPEERTLQNAVPGGDPLAQGIPVTGPTPSRKKRSATLH EPGLTTDPTPDAPPPSQNSEDDDGDGWTMETPNV >Mature_753_residues TPRYRINEADRLILGGGQTLTCKGLTKTGYLLQPFGTDLTDHISFKDFEEARQHPDFRHRPLYYSEPRARARARTLIESN DDIPAEELPDVRWRETCVLAFHDEEAKDLRNPPPPDQQRVNRTKAGFEEAMRRARPQLMQLDCAKKAAAKEAAQSRPSLA KSGMRRKIRAGRAVVFRSLPGAKTLQRWTLAYEEAGCEAWGLRQCHCNSGNYKPRFTADEHTMMMEAVYAYLDRKRPTLE QCYKDYGDKLIEENNKRAENGQPPLRRIGASTYRARVKRVSRFHRDAARHGIEYAIRKNGGVRRKFDVTRIGERVEIDGC KVSLIHMAAESGIWAKMTAEQKHKVPKERWILLRAIDVASKCILAEVITPTETTKAAAVLLRMMISDKTPLAAAMGAKTP WNYACVPHSIATDGGAAFRSDQFRQMLADLGIIFVAPQVGQPNKRATVERSFGTTRTQFLQHFSGQTFANVSDKGDYDPG KNASLFVDELARALVLYDVDIYHNTPHEGLHGETPRACWQRLMIESGCSRITPGAHQQRAIFGVHLSRKLSKRGIRILGL HYQSEDLAALLAEKGEIDLPVRIDPDDLGWISVQISRTWKTIPCATSSLQGASIQAWLSVVEDQRRRYDIAAAASRPVIA DALRQIRAIAAKAERRFGISPHTYDAEAISRAEAEMLRGFDVPEERTLQNAVPGGDPLAQGIPVTGPTPSRKKRSATLHE PGLTTDPTPDAPPPSQNSEDDDGDGWTMETPNV
Specific function: Unknown
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84396; Mature: 84265
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRYRINEADRLILGGGQTLTCKGLTKTGYLLQPFGTDLTDHISFKDFEEARQHPDFRH CCCCCCCCCCCEEEECCCCEEEECCCCCCCCEECCCCCCHHHCCCCCCHHHHHCCCCCCC RPLYYSEPRARARARTLIESNDDIPAEELPDVRWRETCVLAFHDEEAKDLRNPPPPDQQR CCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEEECCHHHHCCCCCCCCHHH VNRTKAGFEEAMRRARPQLMQLDCAKKAAAKEAAQSRPSLAKSGMRRKIRAGRAVVFRSL HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECC PGAKTLQRWTLAYEEAGCEAWGLRQCHCNSGNYKPRFTADEHTMMMEAVYAYLDRKRPTL CCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH EQCYKDYGDKLIEENNKRAENGQPPLRRIGASTYRARVKRVSRFHRDAARHGIEYAIRKN HHHHHHHHHHHHHCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCEEEEECC GGVRRKFDVTRIGERVEIDGCKVSLIHMAAESGIWAKMTAEQKHKVPKERWILLRAIDVA CCCEEEEEHHHCCCEEEECCCEEEEEEEHHHCCCEEEECCHHHHCCCHHHHHHHHHHHHH SKCILAEVITPTETTKAAAVLLRMMISDKTPLAAAMGAKTPWNYACVPHSIATDGGAAFR HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCHHH SDQFRQMLADLGIIFVAPQVGQPNKRATVERSFGTTRTQFLQHFSGQTFANVSDKGDYDP HHHHHHHHHCCCEEEEECCCCCCCCCCEEHHHCCCHHHHHHHHHCCCEEECCCCCCCCCC GKNASLFVDELARALVLYDVDIYHNTPHEGLHGETPRACWQRLMIESGCSRITPGAHQQR CCCCCHHHHHHHHHHHHEEEEHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH AIFGVHLSRKLSKRGIRILGLHYQSEDLAALLAEKGEIDLPVRIDPDDLGWISVQISRTW HHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCE KTIPCATSSLQGASIQAWLSVVEDQRRRYDIAAAASRPVIADALRQIRAIAAKAERRFGI EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC SPHTYDAEAISRAEAEMLRGFDVPEERTLQNAVPGGDPLAQGIPVTGPTPSRKKRSATLH CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHCCCCCC EPGLTTDPTPDAPPPSQNSEDDDGDGWTMETPNV CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC >Mature Secondary Structure TPRYRINEADRLILGGGQTLTCKGLTKTGYLLQPFGTDLTDHISFKDFEEARQHPDFRH CCCCCCCCCCEEEECCCCEEEECCCCCCCCEECCCCCCHHHCCCCCCHHHHHCCCCCCC RPLYYSEPRARARARTLIESNDDIPAEELPDVRWRETCVLAFHDEEAKDLRNPPPPDQQR CCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEEECCHHHHCCCCCCCCHHH VNRTKAGFEEAMRRARPQLMQLDCAKKAAAKEAAQSRPSLAKSGMRRKIRAGRAVVFRSL HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECC PGAKTLQRWTLAYEEAGCEAWGLRQCHCNSGNYKPRFTADEHTMMMEAVYAYLDRKRPTL CCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH EQCYKDYGDKLIEENNKRAENGQPPLRRIGASTYRARVKRVSRFHRDAARHGIEYAIRKN HHHHHHHHHHHHHCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCEEEEECC GGVRRKFDVTRIGERVEIDGCKVSLIHMAAESGIWAKMTAEQKHKVPKERWILLRAIDVA CCCEEEEEHHHCCCEEEECCCEEEEEEEHHHCCCEEEECCHHHHCCCHHHHHHHHHHHHH SKCILAEVITPTETTKAAAVLLRMMISDKTPLAAAMGAKTPWNYACVPHSIATDGGAAFR HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCHHH SDQFRQMLADLGIIFVAPQVGQPNKRATVERSFGTTRTQFLQHFSGQTFANVSDKGDYDP HHHHHHHHHCCCEEEEECCCCCCCCCCEEHHHCCCHHHHHHHHHCCCEEECCCCCCCCCC GKNASLFVDELARALVLYDVDIYHNTPHEGLHGETPRACWQRLMIESGCSRITPGAHQQR CCCCCHHHHHHHHHHHHEEEEHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCH AIFGVHLSRKLSKRGIRILGLHYQSEDLAALLAEKGEIDLPVRIDPDDLGWISVQISRTW HHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCE KTIPCATSSLQGASIQAWLSVVEDQRRRYDIAAAASRPVIADALRQIRAIAAKAERRFGI EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC SPHTYDAEAISRAEAEMLRGFDVPEERTLQNAVPGGDPLAQGIPVTGPTPSRKKRSATLH CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHCCCCCC EPGLTTDPTPDAPPPSQNSEDDDGDGWTMETPNV CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA