| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751089
Identifier: 170751089
GI number: 170751089
Start: 5007642
End: 5008124
Strand: Reverse
Name: 170751089
Synonym: Mrad2831_4705
Alternate gene names: NA
Gene position: 5008124-5007642 (Counterclockwise)
Preceding gene: 170751090
Following gene: 170751088
Centisome position: 82.4
GC content: 58.59
Gene sequence:
>483_bases ATGTGGTTGCGCCTGTCGAAAATTGCCCTGGTGGCCTCGATCGCCCTGACATGCAGCCTGGTGGCACTGGGGAACATCGT AGACCCAAATCCGAATCTGGCATTCGTGCGGCATGTCCTGTCGATGGACACCATTTCGCCGGACCGTAGCATCCACAGTC GAGCTATCATCAATCCTGAGCTGCAATGGTTTGCCTTCAGCCTGATTGTGTTGGGGGAGATTCTGGCCGCACTGCTCCTA TGGCTCGGCGCGATCCAGATGCTCCGGCACCTGATGGAGGCCGGTCCCCGTTTCGCGCGCGCCAAAGCGCCCGCCATCGT CGGGCTCAGCATCGGAGTCATGATCTGGCAGGGTGGGTTCCTGGGCATTGGCGGTGAGTGGTTCGGTATGTGGATGTCCA AAACATGGAACGGTCAGGAATCGGCCTTCCGATTTGCCATGATGGCGCTCGGCGTGCTGGTCTATCTGATCATTTCGGAT TGA
Upstream 100 bases:
>100_bases CGATACCGGCTCGCCCACCGCCTGCGCCGAAGGCTTCGCCCTAAGCTTGCGGCCGCGAAGTCCGAAGCCGCGAGCATAGT CCGCCATTGGAGGCTCAGGC
Downstream 100 bases:
>100_bases GAGATGGTGCGTGATGCTCAAATGATGTTTCATGTACATGACCCGGGACGTCCGCGTGCTTCGATGCCGTCCTAGGTTTC ATCATCGCCCCTCCTGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane Protein
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MWLRLSKIALVASIALTCSLVALGNIVDPNPNLAFVRHVLSMDTISPDRSIHSRAIINPELQWFAFSLIVLGEILAALLL WLGAIQMLRHLMEAGPRFARAKAPAIVGLSIGVMIWQGGFLGIGGEWFGMWMSKTWNGQESAFRFAMMALGVLVYLIISD
Sequences:
>Translated_160_residues MWLRLSKIALVASIALTCSLVALGNIVDPNPNLAFVRHVLSMDTISPDRSIHSRAIINPELQWFAFSLIVLGEILAALLL WLGAIQMLRHLMEAGPRFARAKAPAIVGLSIGVMIWQGGFLGIGGEWFGMWMSKTWNGQESAFRFAMMALGVLVYLIISD >Mature_160_residues MWLRLSKIALVASIALTCSLVALGNIVDPNPNLAFVRHVLSMDTISPDRSIHSRAIINPELQWFAFSLIVLGEILAALLL WLGAIQMLRHLMEAGPRFARAKAPAIVGLSIGVMIWQGGFLGIGGEWFGMWMSKTWNGQESAFRFAMMALGVLVYLIISD
Specific function: Unknown
COG id: COG5472
COG function: function code S; Predicted small integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17594; Mature: 17594
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLRLSKIALVASIALTCSLVALGNIVDPNPNLAFVRHVLSMDTISPDRSIHSRAIINPE CCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHEECCCC LQWFAFSLIVLGEILAALLLWLGAIQMLRHLMEAGPRFARAKAPAIVGLSIGVMIWQGGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEHHHHHHHHCCCCE LGIGGEWFGMWMSKTWNGQESAFRFAMMALGVLVYLIISD EECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MWLRLSKIALVASIALTCSLVALGNIVDPNPNLAFVRHVLSMDTISPDRSIHSRAIINPE CCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHEECCCC LQWFAFSLIVLGEILAALLLWLGAIQMLRHLMEAGPRFARAKAPAIVGLSIGVMIWQGGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEHHHHHHHHCCCCE LGIGGEWFGMWMSKTWNGQESAFRFAMMALGVLVYLIISD EECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA