| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ycjG [H]
Identifier: 170751047
GI number: 170751047
Start: 4959032
End: 4960015
Strand: Direct
Name: ycjG [H]
Synonym: Mrad2831_4658
Alternate gene names: 170751047
Gene position: 4959032-4960015 (Clockwise)
Preceding gene: 170751046
Following gene: 170751048
Centisome position: 81.59
GC content: 74.8
Gene sequence:
>984_bases ATGGCGCGCCGCCTGACCCTCGCCGTCGAGCGCTTTCCCATCGCCGGCGCCTTCACGATCTCGCGCGGCAGCCGCACCGA GATCGCCGTCGTGGTGGCGACGATCGCGGACGGCGACGCGGTCGGGCGCGGCGAGTGCGTGCCCTATCCGCGCTACGGCG AGAGCGTCGAGAGCGTCAGCGCCCTGATCGAGGGCCAGGCGGAGGCGATCGCCGCCGGGATCGAGCGGGACGCGCTCATG GCCCGCATGAAGGCGGGCGCCGCGCGCAACGCCCTCGACTGCGCGCTGTTCGACCTCGAGGCGAAGCGCCAGGGCCGCCC CGCCTGGGAGATCGCGGGTCTCGCCGAGCCCCGGCCGGCGATCACCGCCTACACGCTGAGCCTCGGCACGCCGGAGAGCA TGGCGGAGGCCGCCCGCAAGTCCGCCCACCGGCCGCTGCTCAAGGTCAAGCTCGGCGGGGACGGCGATCCGGAGCGCATC GCCGCGGTGCGGGCCGGCGCGCCGGAATCCCGGCTGATCGTCGACGCCAACGAGGCGTGGCGGCCCGAGAACGTCGAGGC CAACCTCGCGGCCTGCCTGAAGGCGGGCGTCGCGCTGATCGAGCAGCCGCTGCCGGCCGACGCCGACGCCCTGCTGGCCG AGATCCCCCACCCGGTGCCGGTCTGCGCCGACGAGAGCCTGCACGACCGTGCCGGACTCGACGCGCTGGCCGGGCGCTAC GACGCGATCAACATCAAGCTCGACAAGACCGGCGGCCTGACCGAGGCGGTGCTCCTCGCCCGCGAGGCGCGGGCCCGGGG GCTCTCGATCATGGTCGGCTGCATGCTCGGCACCTCGCTGGGCATGGCGCCGGCGGCACTGCTCGCCAACGCCGCGGAGT TCGTCGACCTCGACGGACCGCTGCTGCTGGCCTGCGACCGTGACCCGCCGCTGCGCTACGAGGGCAGCCTGATGCACCCG CCGACGCCGGAGCTCTGGGGCTAG
Upstream 100 bases:
>100_bases AAGCTCGCGTCCGAGCACGGCCTGCCCGCCACCGACCCGGTGCGCTTCGGCGTCGACGGGCTGGTCGACCGGATCGTCGC CGACTTCCCGGAGGCCTGAC
Downstream 100 bases:
>100_bases GGCACGCGGGCGGAGCGGTCGCCGTCCGCGGTCCGAGACCGCCCAGCGCGAGATCCCGGAGGCTCGGCCCTGTGGAGATC CCAGGTGCGGACGATAGGGA
Product: mandelate racemase/muconate lactonizing protein
Products: NA
Alternate protein names: AE epimerase; AEE [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MARRLTLAVERFPIAGAFTISRGSRTEIAVVVATIADGDAVGRGECVPYPRYGESVESVSALIEGQAEAIAAGIERDALM ARMKAGAARNALDCALFDLEAKRQGRPAWEIAGLAEPRPAITAYTLSLGTPESMAEAARKSAHRPLLKVKLGGDGDPERI AAVRAGAPESRLIVDANEAWRPENVEANLAACLKAGVALIEQPLPADADALLAEIPHPVPVCADESLHDRAGLDALAGRY DAINIKLDKTGGLTEAVLLAREARARGLSIMVGCMLGTSLGMAPAALLANAAEFVDLDGPLLLACDRDPPLRYEGSLMHP PTPELWG
Sequences:
>Translated_327_residues MARRLTLAVERFPIAGAFTISRGSRTEIAVVVATIADGDAVGRGECVPYPRYGESVESVSALIEGQAEAIAAGIERDALM ARMKAGAARNALDCALFDLEAKRQGRPAWEIAGLAEPRPAITAYTLSLGTPESMAEAARKSAHRPLLKVKLGGDGDPERI AAVRAGAPESRLIVDANEAWRPENVEANLAACLKAGVALIEQPLPADADALLAEIPHPVPVCADESLHDRAGLDALAGRY DAINIKLDKTGGLTEAVLLAREARARGLSIMVGCMLGTSLGMAPAALLANAAEFVDLDGPLLLACDRDPPLRYEGSLMHP PTPELWG >Mature_326_residues ARRLTLAVERFPIAGAFTISRGSRTEIAVVVATIADGDAVGRGECVPYPRYGESVESVSALIEGQAEAIAAGIERDALMA RMKAGAARNALDCALFDLEAKRQGRPAWEIAGLAEPRPAITAYTLSLGTPESMAEAARKSAHRPLLKVKLGGDGDPERIA AVRAGAPESRLIVDANEAWRPENVEANLAACLKAGVALIEQPLPADADALLAEIPHPVPVCADESLHDRAGLDALAGRYD AINIKLDKTGGLTEAVLLAREARARGLSIMVGCMLGTSLGMAPAALLANAAEFVDLDGPLLLACDRDPPLRYEGSLMHPP TPELWG
Specific function: Catalyzes the epimerization of L-Ala-D-Glu to L-Ala-L- Glu and has a role in the recycling of the murein peptide, of which L-Ala-D-Glu is a component. Is also able to catalyze the reverse reaction and the epimerization of all the L-Ala-X dipeptides, excep
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI87081876, Length=319, Percent_Identity=48.2758620689655, Blast_Score=277, Evalue=6e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018110 - InterPro: IPR013342 - InterPro: IPR013341 - InterPro: IPR001354 [H]
Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]
EC number: NA
Molecular weight: Translated: 34317; Mature: 34186
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRLTLAVERFPIAGAFTISRGSRTEIAVVVATIADGDAVGRGECVPYPRYGESVESVS CCCEEEEEEECCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH ALIEGQAEAIAAGIERDALMARMKAGAARNALDCALFDLEAKRQGRPAWEIAGLAEPRPA HHHHCCHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECHHHHCCCCCEEECCCCCCCCC ITAYTLSLGTPESMAEAARKSAHRPLLKVKLGGDGDPERIAAVRAGAPESRLIVDANEAW EEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHEEEEECCCCCCEEEEECCCCC RPENVEANLAACLKAGVALIEQPLPADADALLAEIPHPVPVCADESLHDRAGLDALAGRY CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHCCC DAINIKLDKTGGLTEAVLLAREARARGLSIMVGCMLGTSLGMAPAALLANAAEFVDLDGP EEEEEEEECCCCHHHHHHHHHHHHHCCHHEEEHHHHHCCCCCHHHHHHHCHHHHEECCCC LLLACDRDPPLRYEGSLMHPPTPELWG EEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARRLTLAVERFPIAGAFTISRGSRTEIAVVVATIADGDAVGRGECVPYPRYGESVESVS CCEEEEEEECCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH ALIEGQAEAIAAGIERDALMARMKAGAARNALDCALFDLEAKRQGRPAWEIAGLAEPRPA HHHHCCHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECHHHHCCCCCEEECCCCCCCCC ITAYTLSLGTPESMAEAARKSAHRPLLKVKLGGDGDPERIAAVRAGAPESRLIVDANEAW EEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHEEEEECCCCCCEEEEECCCCC RPENVEANLAACLKAGVALIEQPLPADADALLAEIPHPVPVCADESLHDRAGLDALAGRY CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHCCC DAINIKLDKTGGLTEAVLLAREARARGLSIMVGCMLGTSLGMAPAALLANAAEFVDLDGP EEEEEEEECCCCHHHHHHHHHHHHHCCHHEEEHHHHHCCCCCHHHHHHHCHHHHEECCCC LLLACDRDPPLRYEGSLMHPPTPELWG EEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7499381; 9097039; 9278503 [H]