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The map label for this gene is glcF [H]

Identifier: 170751039

GI number: 170751039

Start: 4947710

End: 4949050

Strand: Reverse

Name: glcF [H]

Synonym: Mrad2831_4650

Alternate gene names: 170751039

Gene position: 4949050-4947710 (Counterclockwise)

Preceding gene: 170751040

Following gene: 170751038

Centisome position: 81.43

GC content: 72.71

Gene sequence:

>1341_bases
GTGCAGACCAACTTCGCCCCCGCCCAGCTCGCCGATCCCGCCATGGCGGCGTCGGAGAAGATCCTGCGGACCTGCGTGCA
TTGCGGCTTCTGCACGGCGACCTGCCCGACCTACCTGCTTCTCGGGGACGAGCTCGATTCCCCGCGCGGGCGGATCTACC
TGATCAAGGACATGCTGGAGGGCGGCAAGCCGGCCTCGCAGGAGGTGGTCAAGCACGTCGACCGCTGCCTCTCGTGCCTG
TCCTGCATGACCACCTGCCCGTCGGGGGTGCACTACATGCACCTCGTCGACCACGCCCGGGCGCATATCGAGGAGACCTA
CACCCGCCCCGCCGGCGACCGGTTCCTGCGGGCGCTGCTCGCCCAGGTCCTGCCCTATCCGGGCCGCTTCCGCCTCGCGC
TCACCGCCGCCAGGCTCGGCGCGCCGTTCCGGGGCCTGGTGGCCCGGCTGCCGCGGGTCGGCAACCGCCTCGCGGCCATG
CTCGACCTCGCGCCGGCCGGGACGCCGCCCCGCGAGCCGACGAACCGGCCCGGCCGGTTCCCGCCGGCGGGCGCGGGGGC
GGCCGGGACGGCCCCCAAGCGCGTCGCCCTGCTGCGCGGCTGCGCCCAGAGCGTGCTGCGGCCGGACTTCAACGCCGCCG
CGATCCGGCTGCTCAACCGGCACGGGATCGAGGTCGTCCACGCGAACGAGGGCTGCTGCGGGGCGCTGACCCACCACATG
GGCAAGGAGGACTCGGCCCACGCCCACGCCAAGCAGGCGATCGACGCCTGGGACGCCGAGATCGCCAAAGGCCTCGACGC
GATCCTGGTCACGGCCTCGGGCTGCGGCACGACCATCAAGGATTACGGCTTCATGTTCCGCGACGACCCGGCCTACGCCG
AGAAGGCGCTGCGGGTCTCGAGCCTGGCCAAGGACGTGACCGAGTACCTCGCGCTGCTCGACCTGGCCCCCGTCGCCGAG
ACCGACCTGGTGGTGGCCTACCACTCGGCCTGCTCGATGCAGCACGGCCAGGGCATCCGGCTGGAGCCCAAGACGCTGCT
GAAGCGCGCGGGCTTCACCGTGAAGGACGTGCCCGAGGGCCACATCTGCTGCGGCTCAGCGGGGACCTACAACATCCTGC
AGCCGGAGCTGGCCGCGAAGCTGCGCGCCCGGAAGGTCGCCAATATCGAGCGCGTGCGCCCCGACGTGATCGCCACCGGC
AACATCGGCTGCGCCACGCAGATCGGGAAGGGCACCGGCATCCCGATCGTCCACACGGTCGAGCTGCTCGACTGGGCCAC
CGGCGGCCCGAAGCCCGCGGCGCTGGCCGGGGTGGCGCCGCGGCTCGAAGCGGCGGAGTAG

Upstream 100 bases:

>100_bases
CGCCGGGGTGCTCAACCCCGGCCGGATGTACGCCGGACTGTAAGCATCAGATTTCGCCCCTCCCCGACCGTGGGGAGGCG
TGGCGCCGAGGACGCGACCC

Downstream 100 bases:

>100_bases
GCACACGCCTGTCGCGACGCGGCAGGCCGTCATCGCGCGCGCAGCGAGGCGATCCGGCGATGCGGCCCAGGGATGCGGCC
CAGGGATGCGGCCCATCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MQTNFAPAQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLEGGKPASQEVVKHVDRCLSCL
SCMTTCPSGVHYMHLVDHARAHIEETYTRPAGDRFLRALLAQVLPYPGRFRLALTAARLGAPFRGLVARLPRVGNRLAAM
LDLAPAGTPPREPTNRPGRFPPAGAGAAGTAPKRVALLRGCAQSVLRPDFNAAAIRLLNRHGIEVVHANEGCCGALTHHM
GKEDSAHAHAKQAIDAWDAEIAKGLDAILVTASGCGTTIKDYGFMFRDDPAYAEKALRVSSLAKDVTEYLALLDLAPVAE
TDLVVAYHSACSMQHGQGIRLEPKTLLKRAGFTVKDVPEGHICCGSAGTYNILQPELAAKLRARKVANIERVRPDVIATG
NIGCATQIGKGTGIPIVHTVELLDWATGGPKPAALAGVAPRLEAAE

Sequences:

>Translated_446_residues
MQTNFAPAQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLEGGKPASQEVVKHVDRCLSCL
SCMTTCPSGVHYMHLVDHARAHIEETYTRPAGDRFLRALLAQVLPYPGRFRLALTAARLGAPFRGLVARLPRVGNRLAAM
LDLAPAGTPPREPTNRPGRFPPAGAGAAGTAPKRVALLRGCAQSVLRPDFNAAAIRLLNRHGIEVVHANEGCCGALTHHM
GKEDSAHAHAKQAIDAWDAEIAKGLDAILVTASGCGTTIKDYGFMFRDDPAYAEKALRVSSLAKDVTEYLALLDLAPVAE
TDLVVAYHSACSMQHGQGIRLEPKTLLKRAGFTVKDVPEGHICCGSAGTYNILQPELAAKLRARKVANIERVRPDVIATG
NIGCATQIGKGTGIPIVHTVELLDWATGGPKPAALAGVAPRLEAAE
>Mature_446_residues
MQTNFAPAQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLEGGKPASQEVVKHVDRCLSCL
SCMTTCPSGVHYMHLVDHARAHIEETYTRPAGDRFLRALLAQVLPYPGRFRLALTAARLGAPFRGLVARLPRVGNRLAAM
LDLAPAGTPPREPTNRPGRFPPAGAGAAGTAPKRVALLRGCAQSVLRPDFNAAAIRLLNRHGIEVVHANEGCCGALTHHM
GKEDSAHAHAKQAIDAWDAEIAKGLDAILVTASGCGTTIKDYGFMFRDDPAYAEKALRVSSLAKDVTEYLALLDLAPVAE
TDLVVAYHSACSMQHGQGIRLEPKTLLKRAGFTVKDVPEGHICCGSAGTYNILQPELAAKLRARKVANIERVRPDVIATG
NIGCATQIGKGTGIPIVHTVELLDWATGGPKPAALAGVAPRLEAAE

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=428, Percent_Identity=43.9252336448598, Blast_Score=340, Evalue=2e-94,
Organism=Escherichia coli, GI1786497, Length=241, Percent_Identity=26.1410788381743, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1788576, Length=415, Percent_Identity=23.855421686747, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 47484; Mature: 47484

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTNFAPAQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLE
CCCCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCCCCCCEEEEEHHHHC
GGKPASQEVVKHVDRCLSCLSCMTTCPSGVHYMHLVDHARAHIEETYTRPAGDRFLRALL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AQVLPYPGRFRLALTAARLGAPFRGLVARLPRVGNRLAAMLDLAPAGTPPREPTNRPGRF
HHHCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PPAGAGAAGTAPKRVALLRGCAQSVLRPDFNAAAIRLLNRHGIEVVHANEGCCGALTHHM
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHC
GKEDSAHAHAKQAIDAWDAEIAKGLDAILVTASGCGTTIKDYGFMFRDDPAYAEKALRVS
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCEECCCHHHHHHHHHHH
SLAKDVTEYLALLDLAPVAETDLVVAYHSACSMQHGQGIRLEPKTLLKRAGFTVKDVPEG
HHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCCCCCCCHHHHHHHCCCCEEECCCC
HICCGSAGTYNILQPELAAKLRARKVANIERVRPDVIATGNIGCATQIGKGTGIPIVHTV
CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEECCCCCCCCHHHHH
ELLDWATGGPKPAALAGVAPRLEAAE
HHHHHCCCCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MQTNFAPAQLADPAMAASEKILRTCVHCGFCTATCPTYLLLGDELDSPRGRIYLIKDMLE
CCCCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCCCCCCEEEEEHHHHC
GGKPASQEVVKHVDRCLSCLSCMTTCPSGVHYMHLVDHARAHIEETYTRPAGDRFLRALL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AQVLPYPGRFRLALTAARLGAPFRGLVARLPRVGNRLAAMLDLAPAGTPPREPTNRPGRF
HHHCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PPAGAGAAGTAPKRVALLRGCAQSVLRPDFNAAAIRLLNRHGIEVVHANEGCCGALTHHM
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHC
GKEDSAHAHAKQAIDAWDAEIAKGLDAILVTASGCGTTIKDYGFMFRDDPAYAEKALRVS
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCEECCCHHHHHHHHHHH
SLAKDVTEYLALLDLAPVAETDLVVAYHSACSMQHGQGIRLEPKTLLKRAGFTVKDVPEG
HHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCCCCCCCHHHHHHHCCCCEEECCCC
HICCGSAGTYNILQPELAAKLRARKVANIERVRPDVIATGNIGCATQIGKGTGIPIVHTV
CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEECCCCCCCCHHHHH
ELLDWATGGPKPAALAGVAPRLEAAE
HHHHHCCCCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8606183; 9278503 [H]