Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is 170751029

Identifier: 170751029

GI number: 170751029

Start: 4936508

End: 4936981

Strand: Direct

Name: 170751029

Synonym: Mrad2831_4640

Alternate gene names: NA

Gene position: 4936508-4936981 (Clockwise)

Preceding gene: 170751024

Following gene: 170751030

Centisome position: 81.22

GC content: 72.36

Gene sequence:

>474_bases
ATGGACATTGTGCCTCCGGCCGAGGACCCGATGCTCGACGACATCTACAACCGCCGTATCCTGGAACTCGCCGCCGACAT
CCCCCGGCTCGGCCGGCTCGAGAACCCGGACGCGACCGCCACGGCCCATTCCCGCCTGTGCGGCTCGACCGTGACGGTCG
ACCTCGTCCTGGGCGAGGACGGCCGGGTCGCGGATTTCGCCCAGGAGGTCCGGGCCTGCGCCCTCGGGCAGGCCTCCTCG
TCGCTGATGGGTCGGCACGTGGTCGGCGCCAGCGCGGAGGAGCTGCGCGGCGTCCGCGAGACCATGCGGTCCATGCTCAA
GGAGAACGGTCCGGCGCCCGACGGCGCGTGGTCCGACCTCGCGGTGCTCGAGCCGGTGCGGGACTTCAAGGCGCGCCACG
CCTCGACGCTCCTGACCTTCGACGCGGTGGTGGACGCCCTCGACCAGATCGCCGCCAAGCGGCAGGCCGCCTGA

Upstream 100 bases:

>100_bases
CCCTGGTCGACGGCCCGCCTCCTCGCGAAGCGGCCGCATCGCGCCTATATCATCGTTCGCGGGGCAACGCGCAATGCGCG
TCGCACGCGGCAGAGTCCCG

Downstream 100 bases:

>100_bases
CGGGATGGTCCGGCGCGCCGCCCACTGGGCGATCCGCGGCTACCAGCTGACGCTGTCGGGCCTGGTCGGCCGCCAGTGCC
GCCACTGGCCGAGCTGCTCC

Product: NifU domain-containing protein

Products: NA

Alternate protein names: NifU Domain-Containing Protein; NifU-Like Protein; Nitrogen Fixation Protein; NifU-Like Protein Involved In Fe-S Cluster Formation; NifU-Related Protein Involved In Fe-S Cluster Formation; Nitrogen-Fixing NifU-Like Protein; NifU-Like Involved In Fe-S Cluster Formation; NIFU-Like Protein; Fe-S Cluster Formation NifU-Like Protein; NifU-Like N Terminal Domain; Nitrogen-Fixing NifU-Like; Fe-S Cluster Formation Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing NifU Domain-Containing Protein; Nifu Protein; MifU-Like Protein Fe-S Cluster Formation; Nitrogen Fixation Protein NifU

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MDIVPPAEDPMLDDIYNRRILELAADIPRLGRLENPDATATAHSRLCGSTVTVDLVLGEDGRVADFAQEVRACALGQASS
SLMGRHVVGASAEELRGVRETMRSMLKENGPAPDGAWSDLAVLEPVRDFKARHASTLLTFDAVVDALDQIAAKRQAA

Sequences:

>Translated_157_residues
MDIVPPAEDPMLDDIYNRRILELAADIPRLGRLENPDATATAHSRLCGSTVTVDLVLGEDGRVADFAQEVRACALGQASS
SLMGRHVVGASAEELRGVRETMRSMLKENGPAPDGAWSDLAVLEPVRDFKARHASTLLTFDAVVDALDQIAAKRQAA
>Mature_157_residues
MDIVPPAEDPMLDDIYNRRILELAADIPRLGRLENPDATATAHSRLCGSTVTVDLVLGEDGRVADFAQEVRACALGQASS
SLMGRHVVGASAEELRGVRETMRSMLKENGPAPDGAWSDLAVLEPVRDFKARHASTLLTFDAVVDALDQIAAKRQAA

Specific function: Unknown

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16849; Mature: 16849

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIVPPAEDPMLDDIYNRRILELAADIPRLGRLENPDATATAHSRLCGSTVTVDLVLGED
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHCCCCEEEEEEECCC
GRVADFAQEVRACALGQASSSLMGRHVVGASAEELRGVRETMRSMLKENGPAPDGAWSDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
AVLEPVRDFKARHASTLLTFDAVVDALDQIAAKRQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDIVPPAEDPMLDDIYNRRILELAADIPRLGRLENPDATATAHSRLCGSTVTVDLVLGED
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHCCCCEEEEEEECCC
GRVADFAQEVRACALGQASSSLMGRHVVGASAEELRGVRETMRSMLKENGPAPDGAWSDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
AVLEPVRDFKARHASTLLTFDAVVDALDQIAAKRQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA