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The map label for this gene is 170751023

Identifier: 170751023

GI number: 170751023

Start: 4930732

End: 4931553

Strand: Direct

Name: 170751023

Synonym: Mrad2831_4634

Alternate gene names: NA

Gene position: 4930732-4931553 (Clockwise)

Preceding gene: 170751020

Following gene: 170751024

Centisome position: 81.13

GC content: 73.36

Gene sequence:

>822_bases
ATGGATGCCTCCCCCGATTTCCCGCGGCAGAGCCGCGTGCCCGTGTTCAACATGCCGGGCATCGTCACCGCGTCGATCGG
GCTGCTCCTGGCGATCCAGGCGGTCCGCGAGTTCCTGCTGCCGGACACCTGGGACATCCGCCTGGTCCTGGACCTCGCGC
TGGTGCCGGCGCGCTGGACCCTCTGGTTCGATCCCGGCCGGGCCTCCGAGGTGATCCGCGCCGCCGCCGATACGGGCGAT
CCCGGCCTGGAGGCCGCCCGCGAGGCCTTCGCCCGCTACATCGTGGGCGAGCACGCGCTCCAGCCCTGGACGCTCGTCAC
CTACGGGCTGCTGCACGGCTCGTGGATGCACGTGATCTTCAACAGCGTCTGGCTCGCGGCCTTCGGAGCCCCGGTGGCGC
GCCGCTGCGGCGCCCTGCGCTGGTGCGTGCTCGCGCTGGCCGGCACGGCGGCCGGCGGGCTTCTCCACATCCTGATCGAC
CCGCTGAGCGCGGGACCGCTGGTCGGCGCCTCGGCGGGGATCTCCGCCCTGATGGCGGCCGCCGCCCGGTTCGTGTTCCA
GCCGCCGGTCTCCGGCTACGGCGCGCCGGCCTGGCAGGTGCCGCCGCCCCGGCCCGCCGAGACGATCCCGGAGCTGCTGC
GCAACCGCACCGCGGTGTCGTTCCTGGTGATCTGGCTCCTGACCAACCTGCTCTTCGGCCTCGTCAGCGTGCCGCTCGTC
GGCGAGAACGCCGCCATCGCCTGGGACGCGCATCTCGGCGGCTTCATCGCGGGCTTCTTCCTGTTCCCCCTGGTGGATCC
CCGGGAGCCGCGCGGGCACTGA

Upstream 100 bases:

>100_bases
GCCGGTCCGGTGTGGCGGACCGGTATCCGGCCGGTCTTCGCGAGCTTCAATACGTCGCCGGGGCTTGCCCCATCGCGCCG
CACCCCGACATGGTGCCGCG

Downstream 100 bases:

>100_bases
GTCCCGGCCCCGGCGCCCGGCACCTTGCCATCCGGCCGGATCGGTCACACACTCGCCACAATGTGAACGAGCCGGGCCAA
CCCGGCCGAGAACGCCATCA

Product: rhomboid family protein

Products: NA

Alternate protein names: Rhomboid-Like Protein; Rhombiod Family Transmembrane Protein; Peptidase Protein; S54 Family Peptidase; Peptidase

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MDASPDFPRQSRVPVFNMPGIVTASIGLLLAIQAVREFLLPDTWDIRLVLDLALVPARWTLWFDPGRASEVIRAAADTGD
PGLEAAREAFARYIVGEHALQPWTLVTYGLLHGSWMHVIFNSVWLAAFGAPVARRCGALRWCVLALAGTAAGGLLHILID
PLSAGPLVGASAGISALMAAAARFVFQPPVSGYGAPAWQVPPPRPAETIPELLRNRTAVSFLVIWLLTNLLFGLVSVPLV
GENAAIAWDAHLGGFIAGFFLFPLVDPREPRGH

Sequences:

>Translated_273_residues
MDASPDFPRQSRVPVFNMPGIVTASIGLLLAIQAVREFLLPDTWDIRLVLDLALVPARWTLWFDPGRASEVIRAAADTGD
PGLEAAREAFARYIVGEHALQPWTLVTYGLLHGSWMHVIFNSVWLAAFGAPVARRCGALRWCVLALAGTAAGGLLHILID
PLSAGPLVGASAGISALMAAAARFVFQPPVSGYGAPAWQVPPPRPAETIPELLRNRTAVSFLVIWLLTNLLFGLVSVPLV
GENAAIAWDAHLGGFIAGFFLFPLVDPREPRGH
>Mature_273_residues
MDASPDFPRQSRVPVFNMPGIVTASIGLLLAIQAVREFLLPDTWDIRLVLDLALVPARWTLWFDPGRASEVIRAAADTGD
PGLEAAREAFARYIVGEHALQPWTLVTYGLLHGSWMHVIFNSVWLAAFGAPVARRCGALRWCVLALAGTAAGGLLHILID
PLSAGPLVGASAGISALMAAAARFVFQPPVSGYGAPAWQVPPPRPAETIPELLRNRTAVSFLVIWLLTNLLFGLVSVPLV
GENAAIAWDAHLGGFIAGFFLFPLVDPREPRGH

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29303; Mature: 29303

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDASPDFPRQSRVPVFNMPGIVTASIGLLLAIQAVREFLLPDTWDIRLVLDLALVPARWT
CCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEHHHHCCEEE
LWFDPGRASEVIRAAADTGDPGLEAAREAFARYIVGEHALQPWTLVTYGLLHGSWMHVIF
EEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
NSVWLAAFGAPVARRCGALRWCVLALAGTAAGGLLHILIDPLSAGPLVGASAGISALMAA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
AARFVFQPPVSGYGAPAWQVPPPRPAETIPELLRNRTAVSFLVIWLLTNLLFGLVSVPLV
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
GENAAIAWDAHLGGFIAGFFLFPLVDPREPRGH
CCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDASPDFPRQSRVPVFNMPGIVTASIGLLLAIQAVREFLLPDTWDIRLVLDLALVPARWT
CCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEHHHHCCEEE
LWFDPGRASEVIRAAADTGDPGLEAAREAFARYIVGEHALQPWTLVTYGLLHGSWMHVIF
EEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
NSVWLAAFGAPVARRCGALRWCVLALAGTAAGGLLHILIDPLSAGPLVGASAGISALMAA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
AARFVFQPPVSGYGAPAWQVPPPRPAETIPELLRNRTAVSFLVIWLLTNLLFGLVSVPLV
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
GENAAIAWDAHLGGFIAGFFLFPLVDPREPRGH
CCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA