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The map label for this gene is 170751020

Identifier: 170751020

GI number: 170751020

Start: 4928304

End: 4928885

Strand: Direct

Name: 170751020

Synonym: Mrad2831_4631

Alternate gene names: NA

Gene position: 4928304-4928885 (Clockwise)

Preceding gene: 170751019

Following gene: 170751023

Centisome position: 81.09

GC content: 70.96

Gene sequence:

>582_bases
ATGCGCCGCGCCCTCGTCCCGCTTGTCGCCTTCTGCCTCGGCCTCGTCGGCCTCACCGGGGCGGCGGTGTTCGCGTTCCT
GCCCGACAAGGCGCCGGTGGGCGTGCCGAGCGTCGGCGGCCCGTTCACGCTGGTGAACCAGGACGGCCGCACCGTCACCG
AGCGCGACTTCGCCGGCGCGACGCACCTCGTGTTCTTCGGCTTCACCCACTGCCCGGACGTGTGCCCGACCACCCTGCAG
CAGATCTCCGACGTGCTGGCCGCCCTGGGCCCGAAGGGCAAGACCATGCGGGTCGCCTTCGTCACGGTCGATCCCGAGCG
GGACGATCCGGCGAGCCTCAAGACCTACCTGTCGAGCTTCGACCCGCGCATCACCGGCCTCACCGGCACGCCCGAGCAGG
TCACCGCCACCGAGAAGGCGTACCGGGCCTACGCCCGCAAGGTTCCGGCCAAGGACGGGGACTACACGATGGAGCACACC
GCGCTCGTCTACGTCATGGACGCGCAGAACCGCTTCGTCGGCGCCCTCGACCTGACCCGGCCGGCCGACGAGGTCGCCGC
GCAGCTCGCCAAGAAGATCTGA

Upstream 100 bases:

>100_bases
GCGCCGGCGCGGCGCCGGGCGGCCGGCGGCACCGCGCCGGCTTGCCTCCGCGCGCCGTTGTGTGCTGTGCCGGCCTCCCC
CGGAGGTCGGAACCCGTCCC

Downstream 100 bases:

>100_bases
CCGCGGGCCGGTCCGGCCGGAGGCGCGTCAGAGCGTCATCCCGGTGTGGAAGCGGTCGGGGGAGAGCGGCAGCAGGAACT
GCACGCCGAAGCCGCCCTCG

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRRALVPLVAFCLGLVGLTGAAVFAFLPDKAPVGVPSVGGPFTLVNQDGRTVTERDFAGATHLVFFGFTHCPDVCPTTLQ
QISDVLAALGPKGKTMRVAFVTVDPERDDPASLKTYLSSFDPRITGLTGTPEQVTATEKAYRAYARKVPAKDGDYTMEHT
ALVYVMDAQNRFVGALDLTRPADEVAAQLAKKI

Sequences:

>Translated_193_residues
MRRALVPLVAFCLGLVGLTGAAVFAFLPDKAPVGVPSVGGPFTLVNQDGRTVTERDFAGATHLVFFGFTHCPDVCPTTLQ
QISDVLAALGPKGKTMRVAFVTVDPERDDPASLKTYLSSFDPRITGLTGTPEQVTATEKAYRAYARKVPAKDGDYTMEHT
ALVYVMDAQNRFVGALDLTRPADEVAAQLAKKI
>Mature_193_residues
MRRALVPLVAFCLGLVGLTGAAVFAFLPDKAPVGVPSVGGPFTLVNQDGRTVTERDFAGATHLVFFGFTHCPDVCPTTLQ
QISDVLAALGPKGKTMRVAFVTVDPERDDPASLKTYLSSFDPRITGLTGTPEQVTATEKAYRAYARKVPAKDGDYTMEHT
ALVYVMDAQNRFVGALDLTRPADEVAAQLAKKI

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI4759068, Length=161, Percent_Identity=35.4037267080745, Blast_Score=120, Evalue=6e-28,
Organism=Homo sapiens, GI281182727, Length=157, Percent_Identity=34.3949044585987, Blast_Score=113, Evalue=1e-25,
Organism=Homo sapiens, GI281182722, Length=157, Percent_Identity=34.3949044585987, Blast_Score=113, Evalue=1e-25,
Organism=Homo sapiens, GI281182716, Length=157, Percent_Identity=34.3949044585987, Blast_Score=113, Evalue=1e-25,
Organism=Homo sapiens, GI153791313, Length=157, Percent_Identity=34.3949044585987, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17531419, Length=169, Percent_Identity=33.1360946745562, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6319511, Length=154, Percent_Identity=44.1558441558442, Blast_Score=125, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6319498, Length=147, Percent_Identity=38.0952380952381, Blast_Score=114, Evalue=9e-27,
Organism=Drosophila melanogaster, GI19920710, Length=199, Percent_Identity=32.6633165829146, Blast_Score=121, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 20689; Mature: 20689

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRALVPLVAFCLGLVGLTGAAVFAFLPDKAPVGVPSVGGPFTLVNQDGRTVTERDFAGA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEECHHHCCCC
THLVFFGFTHCPDVCPTTLQQISDVLAALGPKGKTMRVAFVTVDPERDDPASLKTYLSSF
EEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHC
DPRITGLTGTPEQVTATEKAYRAYARKVPAKDGDYTMEHTALVYVMDAQNRFVGALDLTR
CCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEEEECCCCEEEEEECCC
PADEVAAQLAKKI
CHHHHHHHHHHCC
>Mature Secondary Structure
MRRALVPLVAFCLGLVGLTGAAVFAFLPDKAPVGVPSVGGPFTLVNQDGRTVTERDFAGA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEECHHHCCCC
THLVFFGFTHCPDVCPTTLQQISDVLAALGPKGKTMRVAFVTVDPERDDPASLKTYLSSF
EEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHC
DPRITGLTGTPEQVTATEKAYRAYARKVPAKDGDYTMEHTALVYVMDAQNRFVGALDLTR
CCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEEEECCCCEEEEEECCC
PADEVAAQLAKKI
CHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA