| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750975
Identifier: 170750975
GI number: 170750975
Start: 4881865
End: 4883679
Strand: Direct
Name: 170750975
Synonym: Mrad2831_4586
Alternate gene names: NA
Gene position: 4881865-4883679 (Clockwise)
Preceding gene: 170750974
Following gene: 170750976
Centisome position: 80.32
GC content: 75.87
Gene sequence:
>1815_bases GTGAGCGGACCTGACACGGCCCTGGACAGCCCGCGTCCCGTCGGGGGGATCCGCGGCGCGAGACCGCTGCGGACCGGCGA CGCCCTGGCGCAGCTCGGCTTCGCCGACATCGACCCCGTCCCGGCCGCCGGCGGCGCCGGGCGCGCGGGCGGCCTGCGCG GGGCCGGCCCGATCCGCCGGGGCGACCCCCTGTCGAAGCGCGGCTTCGCCGACGTGCTGGCCGCGGGGGCGCCCGCGGAC GAGCTGATGAAGCCCGGCGCCCTGCGCGGGGCGGCCCGGGGCCGCGACCTCGACAGCCTGTCCCACACCCTGTTCCTGCG CATCTACCCGGTGATCGGCGCCCTCCTGCTGCTGACCCAGCTCGGGATCGCCTGGGTGACCTACACCGACCAGCTCCGCC TGTACGGCGACCGGGCGCATCTCCTCGCCCGGCTCACCGCCGCGGCGATCGCGCGGCCCGACTGGGCGCGCGACCCGGAC GCCTACGACGGCCCGCTCAAGGCCCTGGCCGCCGAGCCCGATTTCGCCCACGCCGTCCTGCGCGACGCCGCGGGCCACGT CGTCGGGTCAGCGGGCGCGGCGCCTCCGGCGCGGGGCTGGTCCACCCTCTCGGCCCAGGCCGACCTGTCGGTGCCCGGCC GCGCCGGCCCGGCGGGCAGCCTGACCGTCACGGTCTCCACGAAGGCGCTGCGGGACAACGCGGCGTGGCAGGTGATGCTC GCCCTCGGCGCCAGCGTCGGGCTGATGATCGCCTTCGTGATCACCCTGCACGCCACCGTGCGCCGCCACGTCATGGCGCC GCTGATGCGGCTGCTGCTCGCGATGCGGGAGATCGAGCACAAGCGCTGGACGACCGTGGACCTCGGGGGCGCCTACCGGC CGAGCAACGAGATCGACGTCATCAGCCAGGCCTTCAACCGCATGGTCGAGGGCCTGCGGAGCGGCGACGCCGCCAAGCAG CTCCTCGTCGAGCTGGAGCAGGCCCACGACAGGCTGGAGCGCGCCAACCGCCAAGTGATCGAGAGCATCGGCTACGCCCG GCGCATCCAGGATTCGGTGCTGCCGGACCGGAACGCCCTGGCGGGCGCCGGGGTCGAGGTCGCGGTGCTGTGGGAACCGC TCCACGTCGTCGGCGGCGACTATTTCTGGCTGGAGGAGATCGACGGCCTCTGCGTGATCGCCGTGGCCGACTGCACCGGC CACGGCGTGCCCGGCGCGTTCCTGACCCTGATCGTCGCGACCGCCCTCGACCGGCTGCTGCACGAGCGCGGCCTGCGCGC GCCGGCCGCGATCCTCGCCGGACTCGACGCGATGGTCCGCACGCAGCTCCGACAGGACGGCCGCGGCGCCGAATCGGATG ACGGGCTCGATTGCGGCCTGTGCGTCTGGGACCGCACGGCCGGAACCCTGCACTTCGCCGGCGCCGGCCTGTCGCTCACG GTGGTCCGGGACGGCGTGGCCGAGCGCGTCCGCGGCGGCCGCCGGGGTCTCGGCTACCCGCGCCCCGCCCGGGCGGGCCA GCGGGAGGACGTCATCGCGGACATCGCCGTTCCGGTGGCGGGCGCCACCTTCTACCTGATGACGGACGGCATCACCGATC AGATGGGCCGCGCGGCGCCGGACCGGGCGCCGCGGCTCCTCGGCCAGCGCGGCGTGGCCGACAGCCTCCTGCGCCACGCC GACCTGCCCCTCGCCGCCCAGGCCGCCGCCCTCGAGGCCGACCTCGACGCCTATCGCGGCGCCGAGACCCGGCGGGACGA CATGACCCTGGTGGCGTTCCGGTTTCCCCAGAACGGAGCGCCGGCCGCCGCCTAA
Upstream 100 bases:
>100_bases GCCGCGACTGCGTGCGCTGCGCGGCGGAGCCGGGCGCGTCCCTGACCTGAGGTGCCGCCCGGCGCATGCGCGCAACCGCT GTGACACGGAGTGACGTCGC
Downstream 100 bases:
>100_bases GGCGGCCCGTTATCCGGCGCCGTGTCCGGGACCGGCGAGCCCGGCGGCGCATCGATCGATCCAACAGCGGCGTAGGGCCG GCGATCCGGCCCGCGCCATG
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: Serine Phosphatase; Bacterial Signal Domain Protein; Phosphatase; Signal Domain Protein; Serine Phosphatase RsbU; Pas/Pac Sensor Protein; Stage II Sporulation E Family Protein; HAMP Domain-Containing; Sensor Kinase; Signal Transduction Protein; Serine/Threonine Protein Kinase; Serine Phosphatase Regulator Of Sigma Subunit; Stage II Sporulation Protein E; Serine Phosphatase RsbU Regulator Of Sigma Subunit
Number of amino acids: Translated: 604; Mature: 603
Protein sequence:
>604_residues MSGPDTALDSPRPVGGIRGARPLRTGDALAQLGFADIDPVPAAGGAGRAGGLRGAGPIRRGDPLSKRGFADVLAAGAPAD ELMKPGALRGAARGRDLDSLSHTLFLRIYPVIGALLLLTQLGIAWVTYTDQLRLYGDRAHLLARLTAAAIARPDWARDPD AYDGPLKALAAEPDFAHAVLRDAAGHVVGSAGAAPPARGWSTLSAQADLSVPGRAGPAGSLTVTVSTKALRDNAAWQVML ALGASVGLMIAFVITLHATVRRHVMAPLMRLLLAMREIEHKRWTTVDLGGAYRPSNEIDVISQAFNRMVEGLRSGDAAKQ LLVELEQAHDRLERANRQVIESIGYARRIQDSVLPDRNALAGAGVEVAVLWEPLHVVGGDYFWLEEIDGLCVIAVADCTG HGVPGAFLTLIVATALDRLLHERGLRAPAAILAGLDAMVRTQLRQDGRGAESDDGLDCGLCVWDRTAGTLHFAGAGLSLT VVRDGVAERVRGGRRGLGYPRPARAGQREDVIADIAVPVAGATFYLMTDGITDQMGRAAPDRAPRLLGQRGVADSLLRHA DLPLAAQAAALEADLDAYRGAETRRDDMTLVAFRFPQNGAPAAA
Sequences:
>Translated_604_residues MSGPDTALDSPRPVGGIRGARPLRTGDALAQLGFADIDPVPAAGGAGRAGGLRGAGPIRRGDPLSKRGFADVLAAGAPAD ELMKPGALRGAARGRDLDSLSHTLFLRIYPVIGALLLLTQLGIAWVTYTDQLRLYGDRAHLLARLTAAAIARPDWARDPD AYDGPLKALAAEPDFAHAVLRDAAGHVVGSAGAAPPARGWSTLSAQADLSVPGRAGPAGSLTVTVSTKALRDNAAWQVML ALGASVGLMIAFVITLHATVRRHVMAPLMRLLLAMREIEHKRWTTVDLGGAYRPSNEIDVISQAFNRMVEGLRSGDAAKQ LLVELEQAHDRLERANRQVIESIGYARRIQDSVLPDRNALAGAGVEVAVLWEPLHVVGGDYFWLEEIDGLCVIAVADCTG HGVPGAFLTLIVATALDRLLHERGLRAPAAILAGLDAMVRTQLRQDGRGAESDDGLDCGLCVWDRTAGTLHFAGAGLSLT VVRDGVAERVRGGRRGLGYPRPARAGQREDVIADIAVPVAGATFYLMTDGITDQMGRAAPDRAPRLLGQRGVADSLLRHA DLPLAAQAAALEADLDAYRGAETRRDDMTLVAFRFPQNGAPAAA >Mature_603_residues SGPDTALDSPRPVGGIRGARPLRTGDALAQLGFADIDPVPAAGGAGRAGGLRGAGPIRRGDPLSKRGFADVLAAGAPADE LMKPGALRGAARGRDLDSLSHTLFLRIYPVIGALLLLTQLGIAWVTYTDQLRLYGDRAHLLARLTAAAIARPDWARDPDA YDGPLKALAAEPDFAHAVLRDAAGHVVGSAGAAPPARGWSTLSAQADLSVPGRAGPAGSLTVTVSTKALRDNAAWQVMLA LGASVGLMIAFVITLHATVRRHVMAPLMRLLLAMREIEHKRWTTVDLGGAYRPSNEIDVISQAFNRMVEGLRSGDAAKQL LVELEQAHDRLERANRQVIESIGYARRIQDSVLPDRNALAGAGVEVAVLWEPLHVVGGDYFWLEEIDGLCVIAVADCTGH GVPGAFLTLIVATALDRLLHERGLRAPAAILAGLDAMVRTQLRQDGRGAESDDGLDCGLCVWDRTAGTLHFAGAGLSLTV VRDGVAERVRGGRRGLGYPRPARAGQREDVIADIAVPVAGATFYLMTDGITDQMGRAAPDRAPRLLGQRGVADSLLRHAD LPLAAQAAALEADLDAYRGAETRRDDMTLVAFRFPQNGAPAAA
Specific function: Unknown
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63675; Mature: 63543
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: PS50885 HAMP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPDTALDSPRPVGGIRGARPLRTGDALAQLGFADIDPVPAAGGAGRAGGLRGAGPIRR CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GDPLSKRGFADVLAAGAPADELMKPGALRGAARGRDLDSLSHTLFLRIYPVIGALLLLTQ CCCCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LGIAWVTYTDQLRLYGDRAHLLARLTAAAIARPDWARDPDAYDGPLKALAAEPDFAHAVL HHHHEEEEECHHEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHH RDAAGHVVGSAGAAPPARGWSTLSAQADLSVPGRAGPAGSLTVTVSTKALRDNAAWQVML HHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCHHHHHHH ALGASVGLMIAFVITLHATVRRHVMAPLMRLLLAMREIEHKRWTTVDLGGAYRPSNEIDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHH ISQAFNRMVEGLRSGDAAKQLLVELEQAHDRLERANRQVIESIGYARRIQDSVLPDRNAL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AGAGVEVAVLWEPLHVVGGDYFWLEEIDGLCVIAVADCTGHGVPGAFLTLIVATALDRLL CCCCCEEEEEECCHHHHCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH HERGLRAPAAILAGLDAMVRTQLRQDGRGAESDDGLDCGLCVWDRTAGTLHFAGAGLSLT HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEE VVRDGVAERVRGGRRGLGYPRPARAGQREDVIADIAVPVAGATFYLMTDGITDQMGRAAP EEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCC DRAPRLLGQRGVADSLLRHADLPLAAQAAALEADLDAYRGAETRRDDMTLVAFRFPQNGA CHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCC PAAA CCCC >Mature Secondary Structure SGPDTALDSPRPVGGIRGARPLRTGDALAQLGFADIDPVPAAGGAGRAGGLRGAGPIRR CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GDPLSKRGFADVLAAGAPADELMKPGALRGAARGRDLDSLSHTLFLRIYPVIGALLLLTQ CCCCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LGIAWVTYTDQLRLYGDRAHLLARLTAAAIARPDWARDPDAYDGPLKALAAEPDFAHAVL HHHHEEEEECHHEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHH RDAAGHVVGSAGAAPPARGWSTLSAQADLSVPGRAGPAGSLTVTVSTKALRDNAAWQVML HHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCHHHHHHH ALGASVGLMIAFVITLHATVRRHVMAPLMRLLLAMREIEHKRWTTVDLGGAYRPSNEIDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHH ISQAFNRMVEGLRSGDAAKQLLVELEQAHDRLERANRQVIESIGYARRIQDSVLPDRNAL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AGAGVEVAVLWEPLHVVGGDYFWLEEIDGLCVIAVADCTGHGVPGAFLTLIVATALDRLL CCCCCEEEEEECCHHHHCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH HERGLRAPAAILAGLDAMVRTQLRQDGRGAESDDGLDCGLCVWDRTAGTLHFAGAGLSLT HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEE VVRDGVAERVRGGRRGLGYPRPARAGQREDVIADIAVPVAGATFYLMTDGITDQMGRAAP EEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCC DRAPRLLGQRGVADSLLRHADLPLAAQAAALEADLDAYRGAETRRDDMTLVAFRFPQNGA CHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCC PAAA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA