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The map label for this gene is yibD [C]

Identifier: 170750941

GI number: 170750941

Start: 4839714

End: 4840814

Strand: Direct

Name: yibD [C]

Synonym: Mrad2831_4552

Alternate gene names: 170750941

Gene position: 4839714-4840814 (Clockwise)

Preceding gene: 170750932

Following gene: 170750942

Centisome position: 79.63

GC content: 63.03

Gene sequence:

>1101_bases
GTGGTAGCCACCCTGTGTCGGGCGCTCGGGGCGGTGAGATACGGGAGCGCGAAGCGACGAGCGAGAAAGACATCTGTCGT
GGCCACGGATCCTAAACTCGCAGTCATCATCACCTGCTTCAACTACGCGAGTTATGTCGGCCAAGCAATCCAGAGCGTCA
TCGCTCAGGGTAATGACGCTTGTGAGATCGTCGTGATTGACGATGGGTCGACGGATGACTCGTGGTCAATTATCCAGCGG
TCCGGCATCACCGCGTTCCGGATCCCGAACGGCGGTCAGAGGGCGGCCTGCCTCTATGGATTGGCCAAGACTCGGGCCCC
GTTTCTGCTCTTTCTCGACGCGGACGACGAGCTCCTGCCTGGCGCGCTCGACCGCATCCTGCCGGCGCTGGACGCGAATG
TCGCCAAACTTCAGTTTTGTCTGACGTGCGTCGATTCCGCGGGAGCAGTGCTGGCGGATCGTTATCCCGCTCTCGACGCG
TTCCGCGGGCAGGACAGGACTGTCAACGACATCCTTAGATCCGGAGTCTACCAGACGCCGCCCACGTCCGGGAATGTGTT
CCGTCGCGACGTTTGCGACCTGCTCCATCAATGTGACTACGACCAAGCTGTCGACGGCGTGATCCTGCTGGCCGCCCCGT
TCATGGGCGAGATCGTCAGTCTCTCCGACAGTCTCGGGCTCTACCGCGTCCACGGCCGGAATGACTCGGGTCTGGGGCGC
GTCCCGCAGGCGGCGACCTTCGAGCGGGACCTGCAGCGCTTCCAGTCGCGTTTGAAACATCTGCGAGATCTGCTCCGGAA
TTGGCGGCCCGGGGTCTCGCTCATCGAGCCGGAGAAGACGTACTATTTTCAGTTCCTCGAGTTCTGCATGGCGATCCTCC
GGGGTGTCCGGTACGGTGGTCGGCCGTTCCTGTGCCTGCTCAGATCTGTCCTGACCGAGCCGCGTTCGCTGAAGTGGAAG
GTCGCGAACGCGCTCTTCGTTGCCGCGACGTTTCTCGCGCCCGTTCGCTGCGCACAGGCGCTGCTCGCCTTCCGCTTCTC
GATCAAGCGCCGGCCGGTCCGCCAGATCCTGCGCGCCAGGATAGGCGCGGGGCTTTGTTGA

Upstream 100 bases:

>100_bases
TCATCGTCAAGCGCCGAGATGGGCAGTGCCAAATTCAGCAATCAGAACTGAGTTTTTGCCGCTCTTTCAGGGTTTTGACT
GTGGATTTCAGTGAGGTGCC

Downstream 100 bases:

>100_bases
AAATCAGTAAATCGACGGATTTTTCTCTTGCGTCGGGTCGCGTTTTTACACCTAAATGCCTGAAATATGTAGCGGCTCTC
CTGTTCGGCTGGAGTCGTAT

Product: cyclic nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MVATLCRALGAVRYGSAKRRARKTSVVATDPKLAVIITCFNYASYVGQAIQSVIAQGNDACEIVVIDDGSTDDSWSIIQR
SGITAFRIPNGGQRAACLYGLAKTRAPFLLFLDADDELLPGALDRILPALDANVAKLQFCLTCVDSAGAVLADRYPALDA
FRGQDRTVNDILRSGVYQTPPTSGNVFRRDVCDLLHQCDYDQAVDGVILLAAPFMGEIVSLSDSLGLYRVHGRNDSGLGR
VPQAATFERDLQRFQSRLKHLRDLLRNWRPGVSLIEPEKTYYFQFLEFCMAILRGVRYGGRPFLCLLRSVLTEPRSLKWK
VANALFVAATFLAPVRCAQALLAFRFSIKRRPVRQILRARIGAGLC

Sequences:

>Translated_366_residues
MVATLCRALGAVRYGSAKRRARKTSVVATDPKLAVIITCFNYASYVGQAIQSVIAQGNDACEIVVIDDGSTDDSWSIIQR
SGITAFRIPNGGQRAACLYGLAKTRAPFLLFLDADDELLPGALDRILPALDANVAKLQFCLTCVDSAGAVLADRYPALDA
FRGQDRTVNDILRSGVYQTPPTSGNVFRRDVCDLLHQCDYDQAVDGVILLAAPFMGEIVSLSDSLGLYRVHGRNDSGLGR
VPQAATFERDLQRFQSRLKHLRDLLRNWRPGVSLIEPEKTYYFQFLEFCMAILRGVRYGGRPFLCLLRSVLTEPRSLKWK
VANALFVAATFLAPVRCAQALLAFRFSIKRRPVRQILRARIGAGLC
>Mature_366_residues
MVATLCRALGAVRYGSAKRRARKTSVVATDPKLAVIITCFNYASYVGQAIQSVIAQGNDACEIVVIDDGSTDDSWSIIQR
SGITAFRIPNGGQRAACLYGLAKTRAPFLLFLDADDELLPGALDRILPALDANVAKLQFCLTCVDSAGAVLADRYPALDA
FRGQDRTVNDILRSGVYQTPPTSGNVFRRDVCDLLHQCDYDQAVDGVILLAAPFMGEIVSLSDSLGLYRVHGRNDSGLGR
VPQAATFERDLQRFQSRLKHLRDLLRNWRPGVSLIEPEKTYYFQFLEFCMAILRGVRYGGRPFLCLLRSVLTEPRSLKWK
VANALFVAATFLAPVRCAQALLAFRFSIKRRPVRQILRARIGAGLC

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40410; Mature: 40410

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS00888 CNMP_BINDING_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVATLCRALGAVRYGSAKRRARKTSVVATDPKLAVIITCFNYASYVGQAIQSVIAQGNDA
CHHHHHHHHHHHHCCHHHHHHHHCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCC
CEIVVIDDGSTDDSWSIIQRSGITAFRIPNGGQRAACLYGLAKTRAPFLLFLDADDELLP
EEEEEEECCCCCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCH
GALDRILPALDANVAKLQFCLTCVDSAGAVLADRYPALDAFRGQDRTVNDILRSGVYQTP
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHCCCCCCHHHHHHCCCCCCC
PTSGNVFRRDVCDLLHQCDYDQAVDGVILLAAPFMGEIVSLSDSLGLYRVHGRNDSGLGR
CCCCCHHHHHHHHHHHHCCHHHHHCCCCEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
VPQAATFERDLQRFQSRLKHLRDLLRNWRPGVSLIEPEKTYYFQFLEFCMAILRGVRYGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCC
RPFLCLLRSVLTEPRSLKWKVANALFVAATFLAPVRCAQALLAFRFSIKRRPVRQILRAR
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGAGLC
HCCCCC
>Mature Secondary Structure
MVATLCRALGAVRYGSAKRRARKTSVVATDPKLAVIITCFNYASYVGQAIQSVIAQGNDA
CHHHHHHHHHHHHCCHHHHHHHHCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCC
CEIVVIDDGSTDDSWSIIQRSGITAFRIPNGGQRAACLYGLAKTRAPFLLFLDADDELLP
EEEEEEECCCCCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCH
GALDRILPALDANVAKLQFCLTCVDSAGAVLADRYPALDAFRGQDRTVNDILRSGVYQTP
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHCCCCCCHHHHHHCCCCCCC
PTSGNVFRRDVCDLLHQCDYDQAVDGVILLAAPFMGEIVSLSDSLGLYRVHGRNDSGLGR
CCCCCHHHHHHHHHHHHCCHHHHHCCCCEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
VPQAATFERDLQRFQSRLKHLRDLLRNWRPGVSLIEPEKTYYFQFLEFCMAILRGVRYGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCC
RPFLCLLRSVLTEPRSLKWKVANALFVAATFLAPVRCAQALLAFRFSIKRRPVRQILRAR
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGAGLC
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840; 2111805 [H]