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The map label for this gene is rfbU [H]

Identifier: 170750938

GI number: 170750938

Start: 4834768

End: 4836786

Strand: Reverse

Name: rfbU [H]

Synonym: Mrad2831_4549

Alternate gene names: 170750938

Gene position: 4836786-4834768 (Counterclockwise)

Preceding gene: 170750939

Following gene: 170750937

Centisome position: 79.58

GC content: 71.07

Gene sequence:

>2019_bases
ATGACGGCAGTCGGATCGTTTGGAATCAACGGTCGGTTCCTCACCCAGCCGATGACCGGGGTTCAGCGCTACGCGATGAA
CGTCACCCGGGCGATGAGCGCGGCCCTGGCCGCGCGGGGCGAGAGCGCCCCCTTGCTGTCCGTGCCGGACGCGGAGGATC
CCCGGCTCGCGGGCACGCCGCTCCGCACCGTCGGACCCGCGGCTGGGCATGCCTGGGAGCAATTCGTCCTGCCGCGCGCG
TGGCCCGGCCGGTTGCTCAACCTCTGCAACACCGCACCCGCGCTGAAGACGGATCAGGTCGTCTGCATCCACGATGCGAA
CGTGTTCAATGCGCCGGAGAGCTACAGCGCGTCGTTCCGGACGTTCTACAGGACACTCCAGCCGCTTCTGGCCCGCCGTG
CCGCGCGGATCGCCACCGTCTCGACCTTCTCCGCCGGGCAGATCGCGAACCATCTCTCTGTGAGGGCCTCCGACATCGCC
GTCCTCCCGAACGGGCACGAGCACGTGCACGCCTGGGATCCGCGACAGGCCGTCCGAGCCCCGGCGGGCCTGGACCGGGA
CTCCGACGGCCTGGAACGCCCCTTCGTGCTGGCCCTCGGGTCCCGCGCCCGTCACAAGAACCTCGATCTGCTCTTCAAGC
TGGCGCCGGCCTTGGGCGAACTCGGGCTCGACCTCGTGGTGGCGGGCGGCCAAGCGACCATCTACGCCGCCGAGGACTTG
AAGCGCGGCGAGAATGTCCGCCACCTCGGCTTCGTCACCGACCACGATCTCGCCTACCTGATGGAACGCGCCCTGTGCCT
GGCCTTCCCCTCCCTCACGGAGGGGTTCGGGCTCCCGGCACTGGAGGCGATGGCGCGCGGCTGCCCCGTCGTCTCGACCG
ACCGCGCGAGTCTGCCGGAGATCTGCGGGTCGGCGGCCCTGCTCGCTCCGCCGGACCGGCCGGACCGTTGGATCGCCCAG
ATCCGCGCCCTGGCCGCCAGCCCGGACCTGCGATCGGACCTGATCGGCCGCGGTCGCGATCAGGCCGCCCTCTTCTCGTG
GGAGGCTTCGGCGCAGGGCTACCTCGATCTCATGCGCGGGCCGAAGGTGCGGCCGGTCGCGCAGACGGCGGCGCGCGACG
CGGCACCGGCGCCGCCGCCGAGCATCGCCGTCGCCATCGCGACGCTGGGCCGCCCCGAGGTGGTGACCGGCACCCTCGGG
CGGATCCTGGATCGGCAGACCCTGAAGCCCGCCGCCATCCTGATCTCCTGCGTCACCCCGGACGATGCCGGCGAGGCGGC
CACGTGGCCCGGCGTGACGGTGGTCACGGGGCGTCCCGGCCTCGCCACTCAGAGAAATGCCGCCCTCGCCGCGCTGCCCG
AGGCGATCGATATCGTGGTCTTCTTCGACGATGACTTCGTCCCCGAGGCCGGCTGGCTCGAAGCGGCCGCGCAGCGCTTC
GAAGACGAGCCGGACATCGTCGGCCTGACGGGCGACGTCGTCGCGGACGGCATCAAGGGGCCCGGACTGCGCTTCACCGA
GGTCGACCGGATGCTCGCCGCGCTGGGTCCGGTCGAGCCGGCGGCGCCCATCGAGGCCTTCAGCCCGTACGGCTGCAACA
TGGCGTTCCGTCGCTCGGCCATCGGCACGCTGCGATTCGACGAGCGGCTCGTCCTGTACGGCTGGCTCGAGGACCGCGAT
TTCGGCGCCGCTCTGGCGGCCAAGGGCGGCCGGCTCGTCAAATGCCTGGAGGCCCGCGGCGTCCATATGGGCGTGAAAGG
CGGCCGTATCTCGGGCGATCGGCTCGGCTATTCGCAGATTGTCAACCCGTTATACATGCTGCGGAAGGGCACGATGACCC
TGTCTCAAGTCTTCGGCCAGATCACCCGCAACGTTCTCAGCAACGTGACGCGCTTCGCGGCCCCCGAGCCGTTCATCGAC
CGGCGCGGCCGGCTGCGCGGCAACCTGCGCGGCGCCGCGGACGTGCTCCTGGGACGGCTGGAACCCGAGCGCGCCCTGCA
GATCCGGCGGAAAGCGTGA

Upstream 100 bases:

>100_bases
AGATCGCGGGCCCGACCACGCCGCTCTCGCGAAAGGTGAAACACTCTTGTTCTCGCATTCGATCCAAGAAGCGGGCCTCC
GACGGGAGTAGAGCGACAGC

Downstream 100 bases:

>100_bases
GATGAACATCTACAACACCACCCGGATCGCGCCGGACCCTTCCCAATCCGTTACCCATTTCCCGGAGGCGGCGTCCGTCG
GCGTGCAGGACGGCCCGCTG

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 672; Mature: 671

Protein sequence:

>672_residues
MTAVGSFGINGRFLTQPMTGVQRYAMNVTRAMSAALAARGESAPLLSVPDAEDPRLAGTPLRTVGPAAGHAWEQFVLPRA
WPGRLLNLCNTAPALKTDQVVCIHDANVFNAPESYSASFRTFYRTLQPLLARRAARIATVSTFSAGQIANHLSVRASDIA
VLPNGHEHVHAWDPRQAVRAPAGLDRDSDGLERPFVLALGSRARHKNLDLLFKLAPALGELGLDLVVAGGQATIYAAEDL
KRGENVRHLGFVTDHDLAYLMERALCLAFPSLTEGFGLPALEAMARGCPVVSTDRASLPEICGSAALLAPPDRPDRWIAQ
IRALAASPDLRSDLIGRGRDQAALFSWEASAQGYLDLMRGPKVRPVAQTAARDAAPAPPPSIAVAIATLGRPEVVTGTLG
RILDRQTLKPAAILISCVTPDDAGEAATWPGVTVVTGRPGLATQRNAALAALPEAIDIVVFFDDDFVPEAGWLEAAAQRF
EDEPDIVGLTGDVVADGIKGPGLRFTEVDRMLAALGPVEPAAPIEAFSPYGCNMAFRRSAIGTLRFDERLVLYGWLEDRD
FGAALAAKGGRLVKCLEARGVHMGVKGGRISGDRLGYSQIVNPLYMLRKGTMTLSQVFGQITRNVLSNVTRFAAPEPFID
RRGRLRGNLRGAADVLLGRLEPERALQIRRKA

Sequences:

>Translated_672_residues
MTAVGSFGINGRFLTQPMTGVQRYAMNVTRAMSAALAARGESAPLLSVPDAEDPRLAGTPLRTVGPAAGHAWEQFVLPRA
WPGRLLNLCNTAPALKTDQVVCIHDANVFNAPESYSASFRTFYRTLQPLLARRAARIATVSTFSAGQIANHLSVRASDIA
VLPNGHEHVHAWDPRQAVRAPAGLDRDSDGLERPFVLALGSRARHKNLDLLFKLAPALGELGLDLVVAGGQATIYAAEDL
KRGENVRHLGFVTDHDLAYLMERALCLAFPSLTEGFGLPALEAMARGCPVVSTDRASLPEICGSAALLAPPDRPDRWIAQ
IRALAASPDLRSDLIGRGRDQAALFSWEASAQGYLDLMRGPKVRPVAQTAARDAAPAPPPSIAVAIATLGRPEVVTGTLG
RILDRQTLKPAAILISCVTPDDAGEAATWPGVTVVTGRPGLATQRNAALAALPEAIDIVVFFDDDFVPEAGWLEAAAQRF
EDEPDIVGLTGDVVADGIKGPGLRFTEVDRMLAALGPVEPAAPIEAFSPYGCNMAFRRSAIGTLRFDERLVLYGWLEDRD
FGAALAAKGGRLVKCLEARGVHMGVKGGRISGDRLGYSQIVNPLYMLRKGTMTLSQVFGQITRNVLSNVTRFAAPEPFID
RRGRLRGNLRGAADVLLGRLEPERALQIRRKA
>Mature_671_residues
TAVGSFGINGRFLTQPMTGVQRYAMNVTRAMSAALAARGESAPLLSVPDAEDPRLAGTPLRTVGPAAGHAWEQFVLPRAW
PGRLLNLCNTAPALKTDQVVCIHDANVFNAPESYSASFRTFYRTLQPLLARRAARIATVSTFSAGQIANHLSVRASDIAV
LPNGHEHVHAWDPRQAVRAPAGLDRDSDGLERPFVLALGSRARHKNLDLLFKLAPALGELGLDLVVAGGQATIYAAEDLK
RGENVRHLGFVTDHDLAYLMERALCLAFPSLTEGFGLPALEAMARGCPVVSTDRASLPEICGSAALLAPPDRPDRWIAQI
RALAASPDLRSDLIGRGRDQAALFSWEASAQGYLDLMRGPKVRPVAQTAARDAAPAPPPSIAVAIATLGRPEVVTGTLGR
ILDRQTLKPAAILISCVTPDDAGEAATWPGVTVVTGRPGLATQRNAALAALPEAIDIVVFFDDDFVPEAGWLEAAAQRFE
DEPDIVGLTGDVVADGIKGPGLRFTEVDRMLAALGPVEPAAPIEAFSPYGCNMAFRRSAIGTLRFDERLVLYGWLEDRDF
GAALAAKGGRLVKCLEARGVHMGVKGGRISGDRLGYSQIVNPLYMLRKGTMTLSQVFGQITRNVLSNVTRFAAPEPFIDR
RGRLRGNLRGAADVLLGRLEPERALQIRRKA

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 71977; Mature: 71846

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVGSFGINGRFLTQPMTGVQRYAMNVTRAMSAALAARGESAPLLSVPDAEDPRLAGTP
CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCC
LRTVGPAAGHAWEQFVLPRAWPGRLLNLCNTAPALKTDQVVCIHDANVFNAPESYSASFR
CHHCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHH
TFYRTLQPLLARRAARIATVSTFSAGQIANHLSVRASDIAVLPNGHEHVHAWDPRQAVRA
HHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHEEEECCEEECCCCCCCEECCCCHHHHCC
PAGLDRDSDGLERPFVLALGSRARHKNLDLLFKLAPALGELGLDLVVAGGQATIYAAEDL
CCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCEEEEEHHHH
KRGENVRHLGFVTDHDLAYLMERALCLAFPSLTEGFGLPALEAMARGCPVVSTDRASLPE
HCCCCCEEECEECCCHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHCCCCEEECCCCCHHH
ICGSAALLAPPDRPDRWIAQIRALAASPDLRSDLIGRGRDQAALFSWEASAQGYLDLMRG
HHCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHCC
PKVRPVAQTAARDAAPAPPPSIAVAIATLGRPEVVTGTLGRILDRQTLKPAAILISCVTP
CCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHCCCCCEEEEEEEECC
DDAGEAATWPGVTVVTGRPGLATQRNAALAALPEAIDIVVFFDDDFVPEAGWLEAAAQRF
CCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHC
EDEPDIVGLTGDVVADGIKGPGLRFTEVDRMLAALGPVEPAAPIEAFSPYGCNMAFRRSA
CCCCCEEECCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
IGTLRFDERLVLYGWLEDRDFGAALAAKGGRLVKCLEARGVHMGVKGGRISGDRLGYSQI
CCEEEECCEEEEEEEECCCCCCHHHHCCCCCEEEEHHHCCCEEECCCCCCCCCCCCHHHH
VNPLYMLRKGTMTLSQVFGQITRNVLSNVTRFAAPEPFIDRRGRLRGNLRGAADVLLGRL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHCC
EPERALQIRRKA
CHHHHHHHHCCC
>Mature Secondary Structure 
TAVGSFGINGRFLTQPMTGVQRYAMNVTRAMSAALAARGESAPLLSVPDAEDPRLAGTP
CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCC
LRTVGPAAGHAWEQFVLPRAWPGRLLNLCNTAPALKTDQVVCIHDANVFNAPESYSASFR
CHHCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHH
TFYRTLQPLLARRAARIATVSTFSAGQIANHLSVRASDIAVLPNGHEHVHAWDPRQAVRA
HHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHEEEECCEEECCCCCCCEECCCCHHHHCC
PAGLDRDSDGLERPFVLALGSRARHKNLDLLFKLAPALGELGLDLVVAGGQATIYAAEDL
CCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCEEEEEHHHH
KRGENVRHLGFVTDHDLAYLMERALCLAFPSLTEGFGLPALEAMARGCPVVSTDRASLPE
HCCCCCEEECEECCCHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHCCCCEEECCCCCHHH
ICGSAALLAPPDRPDRWIAQIRALAASPDLRSDLIGRGRDQAALFSWEASAQGYLDLMRG
HHCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHCC
PKVRPVAQTAARDAAPAPPPSIAVAIATLGRPEVVTGTLGRILDRQTLKPAAILISCVTP
CCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHCCCCCEEEEEEEECC
DDAGEAATWPGVTVVTGRPGLATQRNAALAALPEAIDIVVFFDDDFVPEAGWLEAAAQRF
CCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHC
EDEPDIVGLTGDVVADGIKGPGLRFTEVDRMLAALGPVEPAAPIEAFSPYGCNMAFRRSA
CCCCCEEECCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
IGTLRFDERLVLYGWLEDRDFGAALAAKGGRLVKCLEARGVHMGVKGGRISGDRLGYSQI
CCEEEECCEEEEEEEECCCCCCHHHHCCCCCEEEEHHHCCCEEECCCCCCCCCCCCHHHH
VNPLYMLRKGTMTLSQVFGQITRNVLSNVTRFAAPEPFIDRRGRLRGNLRGAADVLLGRL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHCC
EPERALQIRRKA
CHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]