| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750884
Identifier: 170750884
GI number: 170750884
Start: 4775901
End: 4777616
Strand: Direct
Name: 170750884
Synonym: Mrad2831_4495
Alternate gene names: NA
Gene position: 4775901-4777616 (Clockwise)
Preceding gene: 170750883
Following gene: 170750886
Centisome position: 78.58
GC content: 73.95
Gene sequence:
>1716_bases GTGAATGAGAGGGTGGGGCAGGACCCGGCGGCGGAGGACCCGTTTCGCGCCGGCTTCGACGAGGCCGCGATCGGCCTCGC CGTGCTGTCGGCGGACGGGGCGGGGATCGTCGCCGCCAACCGCGCCCTGCACGATCTCGTCGGCTGGCCGCCGGGCACGC TGTCCGGGCGCGCGGCCGCCGAACTCCTGAACGAGGGGCCCGACGGCCTCCGGGACGGTCTCCAGGTCTGGCGCCGGGCG GACGGGGCACCCCTCGACGTGCGGGTCCGGCGCGCGGGCCGGACCCTGGTGGTCGAGGCGGTCGACGTGGACGCGGCGGC CCATTCCGAGGCGAACCGCGAGGCCCTGGCGGCCGCCGGGCTCGGGGAATGGCGCTGGGACCGCGCGACCGGCCTCCTCA CCCTGTCGCGCCGCGCCGCCCGCATCCTCGGGCGGCCGCCGGGCCGGTCCGTCTCGTGGGAGGAATTGAAGACGGGCCTG TCGCAGGCGGAACTCGCGCGCCTGCGCGCGCTGATCGCCGAGGCGGACGGGACCGACGAGCCCTATCAGTTCGACACGGC CACCACGGTGGCCGGGCGGACCGTGATCCTGCGGGTCCGGGGGCAGGCCGTGCCGGGCCCCGACGGCACGCCGGCCGGTA TGGTCGGCATCCTCCAGGACATCACCACGCGGGTCGAGGCCCGGGACGAGATCCTGTCCCGCGACCAGCGCCTGCGGGTC GCCACCACGGTCGCCCGGCTCGGCATCTTCGAGTGGCACATGCTCGAGGACCAGGCGATCTGGGAGAACGAGCACATGTA CGAGATCTTCGGGCACGCGCCCGAGGACGGCACGATCGGCAAGAACGAGTTCCTCAACGACATCCTCCACCCCGACGACC GCCCCGCCGTCCGCCGGGCGATCTCCCAGGCGCTGCGGGAGGACGGGGATCTGCACATCAGCGGCCGGATCCGCCGCAAG TCCGACGGCGTGTGGCGCACGATCGACATGGCCGGCCGGTTCGAGCGCGACGCCCCCGGCCGCCTGCCCCGCCGCCTGAT CGGCGTCGTCGCGGACGTGACCGACCGCCGGGTCGCGGAGGAGCGCCAGAGCCTGCTGATCCGCGAGCTCCACCACCGGG TGAAGAACACGCTGGCCACGGTCCAGGCCATCGTGGGCTCCACCGCGCGGACGGCGTCGAGCATCGAGAGCTTCTACGAG GCGTTCGTCGGGCGCATCAAATCCCTGGCGCACACGCACTCGGTCCTCACCGAGGACACGTGGCAGACGGCGTCGCTGGC CAACCTCCTGCGCAACGAGCTGAAGCCCTACGCGGAGGTGGCGCCGGACGGCGGCGCCGAGGGCCGCATCAGCCTCGACG GGCCGGCGATCGACCTGCCGTCCGAGATCGCGGTGCCGATCGGCATGGCGATCCACGAACTCACCACCAACGCGGCGAAG TACGGGGCCCTGTCGAACCGCACCGGCCGGGTGGCGGTGGAATGGTCCCTGGAGCCCGGGGGGCCGGCCGGGATCCTGCG GTTCTCATGGCGCGAGACCGGCGGCCCTCCGGTCGCGCCGCCGAGCCGCCAGGGCTTCGGCTCGCGCCTGCTGCAGCGCG TCCTGATCACCCAGGTCCAGGCCGAGGTGACCACCGACTACGCCCCCGGGGGCTTCTCCCTGACCATGCGGGCCCCGATC CCGCCGCGCAACGACAGCCTCAACCCGCTGGTGTGA
Upstream 100 bases:
>100_bases CTCGGGCGCCATCCTCAGGGCCCGCCGCGGTCCCGGATCGTGGCGGGAGGGGGCCATCTCCGGCGGGAGCGTGCCACGGC ACGTTCGAGGATTCTTCCGA
Downstream 100 bases:
>100_bases GGCCGCGGCCGCCCTCAGGGCGGGTTCAGGCCGCGCCGCGGGTCCCGGACTCGCCGCCGCCGTCCACGAAGGCCTTCAGC TCGTCGAGGGACGCGAAGGT
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MNERVGQDPAAEDPFRAGFDEAAIGLAVLSADGAGIVAANRALHDLVGWPPGTLSGRAAAELLNEGPDGLRDGLQVWRRA DGAPLDVRVRRAGRTLVVEAVDVDAAAHSEANREALAAAGLGEWRWDRATGLLTLSRRAARILGRPPGRSVSWEELKTGL SQAELARLRALIAEADGTDEPYQFDTATTVAGRTVILRVRGQAVPGPDGTPAGMVGILQDITTRVEARDEILSRDQRLRV ATTVARLGIFEWHMLEDQAIWENEHMYEIFGHAPEDGTIGKNEFLNDILHPDDRPAVRRAISQALREDGDLHISGRIRRK SDGVWRTIDMAGRFERDAPGRLPRRLIGVVADVTDRRVAEERQSLLIRELHHRVKNTLATVQAIVGSTARTASSIESFYE AFVGRIKSLAHTHSVLTEDTWQTASLANLLRNELKPYAEVAPDGGAEGRISLDGPAIDLPSEIAVPIGMAIHELTTNAAK YGALSNRTGRVAVEWSLEPGGPAGILRFSWRETGGPPVAPPSRQGFGSRLLQRVLITQVQAEVTTDYAPGGFSLTMRAPI PPRNDSLNPLV
Sequences:
>Translated_571_residues MNERVGQDPAAEDPFRAGFDEAAIGLAVLSADGAGIVAANRALHDLVGWPPGTLSGRAAAELLNEGPDGLRDGLQVWRRA DGAPLDVRVRRAGRTLVVEAVDVDAAAHSEANREALAAAGLGEWRWDRATGLLTLSRRAARILGRPPGRSVSWEELKTGL SQAELARLRALIAEADGTDEPYQFDTATTVAGRTVILRVRGQAVPGPDGTPAGMVGILQDITTRVEARDEILSRDQRLRV ATTVARLGIFEWHMLEDQAIWENEHMYEIFGHAPEDGTIGKNEFLNDILHPDDRPAVRRAISQALREDGDLHISGRIRRK SDGVWRTIDMAGRFERDAPGRLPRRLIGVVADVTDRRVAEERQSLLIRELHHRVKNTLATVQAIVGSTARTASSIESFYE AFVGRIKSLAHTHSVLTEDTWQTASLANLLRNELKPYAEVAPDGGAEGRISLDGPAIDLPSEIAVPIGMAIHELTTNAAK YGALSNRTGRVAVEWSLEPGGPAGILRFSWRETGGPPVAPPSRQGFGSRLLQRVLITQVQAEVTTDYAPGGFSLTMRAPI PPRNDSLNPLV >Mature_571_residues MNERVGQDPAAEDPFRAGFDEAAIGLAVLSADGAGIVAANRALHDLVGWPPGTLSGRAAAELLNEGPDGLRDGLQVWRRA DGAPLDVRVRRAGRTLVVEAVDVDAAAHSEANREALAAAGLGEWRWDRATGLLTLSRRAARILGRPPGRSVSWEELKTGL SQAELARLRALIAEADGTDEPYQFDTATTVAGRTVILRVRGQAVPGPDGTPAGMVGILQDITTRVEARDEILSRDQRLRV ATTVARLGIFEWHMLEDQAIWENEHMYEIFGHAPEDGTIGKNEFLNDILHPDDRPAVRRAISQALREDGDLHISGRIRRK SDGVWRTIDMAGRFERDAPGRLPRRLIGVVADVTDRRVAEERQSLLIRELHHRVKNTLATVQAIVGSTARTASSIESFYE AFVGRIKSLAHTHSVLTEDTWQTASLANLLRNELKPYAEVAPDGGAEGRISLDGPAIDLPSEIAVPIGMAIHELTTNAAK YGALSNRTGRVAVEWSLEPGGPAGILRFSWRETGGPPVAPPSRQGFGSRLLQRVLITQVQAEVTTDYAPGGFSLTMRAPI PPRNDSLNPLV
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light. Once ejected from an infected animal host, sunlight acts as an environmental signal that increases the virulence of the bacterium, preparing it for infection o
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR013655 - InterPro: IPR011102 [H]
Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 61919; Mature: 61919
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS50112 PAS ; PS50113 PAC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNERVGQDPAAEDPFRAGFDEAAIGLAVLSADGAGIVAANRALHDLVGWPPGTLSGRAAA CCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCCEEEHHHHHHHHHCCCCCCCCHHHHH ELLNEGPDGLRDGLQVWRRADGAPLDVRVRRAGRTLVVEAVDVDAAAHSEANREALAAAG HHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCHHHCCCHHHHHHHHCC LGEWRWDRATGLLTLSRRAARILGRPPGRSVSWEELKTGLSQAELARLRALIAEADGTDE CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCC PYQFDTATTVAGRTVILRVRGQAVPGPDGTPAGMVGILQDITTRVEARDEILSRDQRLRV CEECCCHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ATTVARLGIFEWHMLEDQAIWENEHMYEIFGHAPEDGTIGKNEFLNDILHPDDRPAVRRA HHHHHHHHHHHEEEECCCHHCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHH ISQALREDGDLHISGRIRRKSDGVWRTIDMAGRFERDAPGRLPRRLIGVVADVTDRRVAE HHHHHHCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ERQSLLIRELHHRVKNTLATVQAIVGSTARTASSIESFYEAFVGRIKSLAHTHSVLTEDT HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WQTASLANLLRNELKPYAEVAPDGGAEGRISLDGPAIDLPSEIAVPIGMAIHELTTNAAK CHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH YGALSNRTGRVAVEWSLEPGGPAGILRFSWRETGGPPVAPPSRQGFGSRLLQRVLITQVQ HCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AEVTTDYAPGGFSLTMRAPIPPRNDSLNPLV HHHHCCCCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MNERVGQDPAAEDPFRAGFDEAAIGLAVLSADGAGIVAANRALHDLVGWPPGTLSGRAAA CCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCCEEEHHHHHHHHHCCCCCCCCHHHHH ELLNEGPDGLRDGLQVWRRADGAPLDVRVRRAGRTLVVEAVDVDAAAHSEANREALAAAG HHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCHHHCCCHHHHHHHHCC LGEWRWDRATGLLTLSRRAARILGRPPGRSVSWEELKTGLSQAELARLRALIAEADGTDE CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCC PYQFDTATTVAGRTVILRVRGQAVPGPDGTPAGMVGILQDITTRVEARDEILSRDQRLRV CEECCCHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ATTVARLGIFEWHMLEDQAIWENEHMYEIFGHAPEDGTIGKNEFLNDILHPDDRPAVRRA HHHHHHHHHHHEEEECCCHHCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHH ISQALREDGDLHISGRIRRKSDGVWRTIDMAGRFERDAPGRLPRRLIGVVADVTDRRVAE HHHHHHCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ERQSLLIRELHHRVKNTLATVQAIVGSTARTASSIESFYEAFVGRIKSLAHTHSVLTEDT HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WQTASLANLLRNELKPYAEVAPDGGAEGRISLDGPAIDLPSEIAVPIGMAIHELTTNAAK CHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH YGALSNRTGRVAVEWSLEPGGPAGILRFSWRETGGPPVAPPSRQGFGSRLLQRVLITQVQ HCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AEVTTDYAPGGFSLTMRAPIPPRNDSLNPLV HHHHCCCCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA