| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is gsiB [H]
Identifier: 170750863
GI number: 170750863
Start: 4754029
End: 4755645
Strand: Direct
Name: gsiB [H]
Synonym: Mrad2831_4474
Alternate gene names: 170750863
Gene position: 4754029-4755645 (Clockwise)
Preceding gene: 170750862
Following gene: 170750864
Centisome position: 78.22
GC content: 66.42
Gene sequence:
>1617_bases TTGTCCCGTTCAGCCCTGAAGATTCTCGCCCGCGGCGTGTCCGCGGTCGCGGTCGCGACGTTCGCGTTCGCCGCGCTGCC CGCGCAGGCCGCCAACGTCTTCCGCTTCGCCTTCCAGGGTGACCTGAAATCCCTCGATCCCTACTCCCTCAAGGAGAGCT TCACGGAAGGGATGCAGGAGGCGGCCTACGAGCCCCTCGTCACCCTCGACAAGAACCTGAAATTCGCGCCCGCCCTCGCG GAATCCTGGGAGACGCCCGAGCCGACGCGCTGGCGCTTCCACCTGCGCAAGAACGTCAAGTTCCACGACGGCTCGCCGTT CACCGCCGACGACGTGATCTTCTCCGCCCAGCGCGTCCGCGCGCCGGGCTCGAACTTCACGACCAACGTGCCCGCCGACG CCGAGTTCGTGAAGGTCGACGACTACACCGTCGACATGGTGCTGAAGAAGCCGAACCCCATCGCCATCGCCCAGTTCCCG ACCTGGGTTATCATGTCGAAAGCGTGGTCCGAGAAGAACGGCGTCGTCCAGCCGACGCCGCCCAGCGCCACCAGCCCGAG CTACGCGACGCTCCACGAGAACGGCACCGGCCCGTTCGTGATCGCCGAGCACCAGCCCGGCGTGAAGACCGTCTTCAAGA AGTTCGACGGCTACTGGGGCAAGGTCGAGTCGAACCTCGACGAGGCGGTGCTGACCACCATCGCCAACCCGGCGACCCGC GTCGCGGCGCTGCTCTCCGGCGAGGTCGACTGGATCGACCCCGTGCCGCTGCAGGACCAGCAGCGGGTCAACGCCAGCGG CACCGCCACCGTCATGGCCGGCCCTGAACTCCGCACGATCTTCCTCGGCATGGACCAGGACCGGGACGAGCTCAAGGATT CGAGCGTCAAGGGCAAGAACCCGTTCAAGGACATCAAGGTCCGCGAGGCCTTCTACCTCGCCATCGACGAGGACACGATC GCCAAGCGCGTGATGCGCGGGCAGGCGGTGCCCTCCGCGCTGATGATCGCCCCGGCCCTCTACGACCGCGGCGCCGAGTT CAAGCGCCCGGCCACCGACCTGAAGAAGGCCAAGGAGCTGATGGCCCAAGCGGGCTACCCGGACGGGTTCTCGCTCACCA TGGACTGCCCCAACGACCGCTACGTCAACGACGAGGCGATCTGCCAGGCGGTGGTCTCGATGCTGGCGCGTATCAACGTC AAGGTGAACCTGAACGCCCAGCCGAAGGCCAAGTACTTCGCCAAGGTTCTGGCGCCGAACTACGACACCTCGTTCTACCT GCTCGGCTGGACCCCGTCCTCGCTCGACAGCCACAACATCCTCTACGAGATCGTCGGCTGCCGGAAGCCCGGCGACAAGT CGGGCCGCGGCGGCTGGAACCTCGCGGGCTACTGCGATCCGAAGATCGACGAGATCGCCGACAAGGTCGAGGGCGAGACC GACAAGACCAAGCGCGACGCCCTGATCAAGGAGGGCTTCGACGTCCTCAACGCCGATTGGGGCTACATCCCGCTGCACCA GCAGGCGCTCGCCTGGGGCGTCTCCAAGAAGGTCCACCTGACCCAGCGCGCCGACAACCTGCTCCTGCTCTACTGGGTGT CGAAGGACCCGCAGTAG
Upstream 100 bases:
>100_bases GCCTTCGTCTTGTATACAGCTGGTCCGAAGCTTGCTGTCGCCGCGGTGGACACCGCCGGGGCTGCCGGCCGGTGGCGCAT TCACGGTCTCGGAGATCCGC
Downstream 100 bases:
>100_bases GAGCGCGGCGTGCTCGCCTTCCTGCTGCGCCGGGTGATCCAGGCGGCCGCGGTCCTCGCGGTCGTCGGGCTCATCGCCTT CGCGATGTTCCGGTTCGCGG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MSRSALKILARGVSAVAVATFAFAALPAQAANVFRFAFQGDLKSLDPYSLKESFTEGMQEAAYEPLVTLDKNLKFAPALA ESWETPEPTRWRFHLRKNVKFHDGSPFTADDVIFSAQRVRAPGSNFTTNVPADAEFVKVDDYTVDMVLKKPNPIAIAQFP TWVIMSKAWSEKNGVVQPTPPSATSPSYATLHENGTGPFVIAEHQPGVKTVFKKFDGYWGKVESNLDEAVLTTIANPATR VAALLSGEVDWIDPVPLQDQQRVNASGTATVMAGPELRTIFLGMDQDRDELKDSSVKGKNPFKDIKVREAFYLAIDEDTI AKRVMRGQAVPSALMIAPALYDRGAEFKRPATDLKKAKELMAQAGYPDGFSLTMDCPNDRYVNDEAICQAVVSMLARINV KVNLNAQPKAKYFAKVLAPNYDTSFYLLGWTPSSLDSHNILYEIVGCRKPGDKSGRGGWNLAGYCDPKIDEIADKVEGET DKTKRDALIKEGFDVLNADWGYIPLHQQALAWGVSKKVHLTQRADNLLLLYWVSKDPQ
Sequences:
>Translated_538_residues MSRSALKILARGVSAVAVATFAFAALPAQAANVFRFAFQGDLKSLDPYSLKESFTEGMQEAAYEPLVTLDKNLKFAPALA ESWETPEPTRWRFHLRKNVKFHDGSPFTADDVIFSAQRVRAPGSNFTTNVPADAEFVKVDDYTVDMVLKKPNPIAIAQFP TWVIMSKAWSEKNGVVQPTPPSATSPSYATLHENGTGPFVIAEHQPGVKTVFKKFDGYWGKVESNLDEAVLTTIANPATR VAALLSGEVDWIDPVPLQDQQRVNASGTATVMAGPELRTIFLGMDQDRDELKDSSVKGKNPFKDIKVREAFYLAIDEDTI AKRVMRGQAVPSALMIAPALYDRGAEFKRPATDLKKAKELMAQAGYPDGFSLTMDCPNDRYVNDEAICQAVVSMLARINV KVNLNAQPKAKYFAKVLAPNYDTSFYLLGWTPSSLDSHNILYEIVGCRKPGDKSGRGGWNLAGYCDPKIDEIADKVEGET DKTKRDALIKEGFDVLNADWGYIPLHQQALAWGVSKKVHLTQRADNLLLLYWVSKDPQ >Mature_537_residues SRSALKILARGVSAVAVATFAFAALPAQAANVFRFAFQGDLKSLDPYSLKESFTEGMQEAAYEPLVTLDKNLKFAPALAE SWETPEPTRWRFHLRKNVKFHDGSPFTADDVIFSAQRVRAPGSNFTTNVPADAEFVKVDDYTVDMVLKKPNPIAIAQFPT WVIMSKAWSEKNGVVQPTPPSATSPSYATLHENGTGPFVIAEHQPGVKTVFKKFDGYWGKVESNLDEAVLTTIANPATRV AALLSGEVDWIDPVPLQDQQRVNASGTATVMAGPELRTIFLGMDQDRDELKDSSVKGKNPFKDIKVREAFYLAIDEDTIA KRVMRGQAVPSALMIAPALYDRGAEFKRPATDLKKAKELMAQAGYPDGFSLTMDCPNDRYVNDEAICQAVVSMLARINVK VNLNAQPKAKYFAKVLAPNYDTSFYLLGWTPSSLDSHNILYEIVGCRKPGDKSGRGGWNLAGYCDPKIDEIADKVEGETD KTKRDALIKEGFDVLNADWGYIPLHQQALAWGVSKKVHLTQRADNLLLLYWVSKDPQ
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=523, Percent_Identity=25.2390057361377, Blast_Score=138, Evalue=8e-34, Organism=Escherichia coli, GI1789966, Length=522, Percent_Identity=25.4789272030651, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1787495, Length=496, Percent_Identity=23.7903225806452, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1789397, Length=532, Percent_Identity=24.4360902255639, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI1789887, Length=530, Percent_Identity=22.4528301886792, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1787762, Length=442, Percent_Identity=23.0769230769231, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1787551, Length=534, Percent_Identity=22.8464419475655, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI87081878, Length=420, Percent_Identity=22.3809523809524, Blast_Score=75, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 59435; Mature: 59304
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSALKILARGVSAVAVATFAFAALPAQAANVFRFAFQGDLKSLDPYSLKESFTEGMQE CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHH AAYEPLVTLDKNLKFAPALAESWETPEPTRWRFHLRKNVKFHDGSPFTADDVIFSAQRVR HHCCCEEEECCCCEECCHHHHCCCCCCCCEEEEEEECCCEECCCCCCCHHHHHHHHHHHC APGSNFTTNVPADAEFVKVDDYTVDMVLKKPNPIAIAQFPTWVIMSKAWSEKNGVVQPTP CCCCCCCCCCCCCCEEEEECCEEEEEEEECCCCEEEECCCCEEEEEHHHCCCCCCCCCCC PSATSPSYATLHENGTGPFVIAEHQPGVKTVFKKFDGYWGKVESNLDEAVLTTIANPATR CCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHCCCCCHHHCCHHHHHHHHHCCHHHH VAALLSGEVDWIDPVPLQDQQRVNASGTATVMAGPELRTIFLGMDQDRDELKDSSVKGKN HHHHHCCCCCCCCCCCCCCHHCCCCCCCEEEEECCCEEEEEEECCCCHHHHHCCCCCCCC PFKDIKVREAFYLAIDEDTIAKRVMRGQAVPSALMIAPALYDRGAEFKRPATDLKKAKEL CCCCCEEEEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH MAQAGYPDGFSLTMDCPNDRYVNDEAICQAVVSMLARINVKVNLNAQPKAKYFAKVLAPN HHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCC YDTSFYLLGWTPSSLDSHNILYEIVGCRKPGDKSGRGGWNLAGYCDPKIDEIADKVEGET CCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC DKTKRDALIKEGFDVLNADWGYIPLHQQALAWGVSKKVHLTQRADNLLLLYWVSKDPQ CHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCC >Mature Secondary Structure SRSALKILARGVSAVAVATFAFAALPAQAANVFRFAFQGDLKSLDPYSLKESFTEGMQE CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHH AAYEPLVTLDKNLKFAPALAESWETPEPTRWRFHLRKNVKFHDGSPFTADDVIFSAQRVR HHCCCEEEECCCCEECCHHHHCCCCCCCCEEEEEEECCCEECCCCCCCHHHHHHHHHHHC APGSNFTTNVPADAEFVKVDDYTVDMVLKKPNPIAIAQFPTWVIMSKAWSEKNGVVQPTP CCCCCCCCCCCCCCEEEEECCEEEEEEEECCCCEEEECCCCEEEEEHHHCCCCCCCCCCC PSATSPSYATLHENGTGPFVIAEHQPGVKTVFKKFDGYWGKVESNLDEAVLTTIANPATR CCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHCCCCCHHHCCHHHHHHHHHCCHHHH VAALLSGEVDWIDPVPLQDQQRVNASGTATVMAGPELRTIFLGMDQDRDELKDSSVKGKN HHHHHCCCCCCCCCCCCCCHHCCCCCCCEEEEECCCEEEEEEECCCCHHHHHCCCCCCCC PFKDIKVREAFYLAIDEDTIAKRVMRGQAVPSALMIAPALYDRGAEFKRPATDLKKAKEL CCCCCEEEEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH MAQAGYPDGFSLTMDCPNDRYVNDEAICQAVVSMLARINVKVNLNAQPKAKYFAKVLAPN HHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCC YDTSFYLLGWTPSSLDSHNILYEIVGCRKPGDKSGRGGWNLAGYCDPKIDEIADKVEGET CCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC DKTKRDALIKEGFDVLNADWGYIPLHQQALAWGVSKKVHLTQRADNLLLLYWVSKDPQ CHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA