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The map label for this gene is erfK [H]

Identifier: 170750859

GI number: 170750859

Start: 4747843

End: 4748406

Strand: Reverse

Name: erfK [H]

Synonym: Mrad2831_4470

Alternate gene names: 170750859

Gene position: 4748406-4747843 (Counterclockwise)

Preceding gene: 170750869

Following gene: 170750857

Centisome position: 78.13

GC content: 71.45

Gene sequence:

>564_bases
ATGTCGAGACGGATCGCGCTACTCGGGCTCGCGGGCCTGCTGCTCGGGAGCGCCCCGGCGGCGGCCGCCAACCCGCTGGA
CAGGGGTCCGATCGCGGACTTCCTCAACATCTTCCGCAGCCAGGCGATCCCGCGCGAGACGGTGGCGTGGACCGGCAAGG
AGAAGCCCGGCACCATCGTGGTCTCGACCCGCCAGCGCCGGCTCTACTACGTGCTCGGCGGCGGCGCGGCGGTCCGCTAC
GGCGTGGGCGTCGGGCGGCAGGGCTTCTCGTGGTCCGGCACCAAGACCGTCACCATGAAGAAGGAATGGCCGGACTGGCG
CCCGCCGCAGCAGATGCTGGCCCGCCGCCCCGACCTGCCGCGCTACATGGCCGGCGGCCAGGACAACCCGCTGGGCGCCC
GCGCCCTCTATCTCGGCTCCTCGCTCTACCGCATCCACGGGTCGAACGAGCCCGAGACGATGGGCGCGGCGGTCTCCTCC
GGCTGCATCCGCATGACCAACAAGGACGTGGTCGACCTCTACGACCGGGTTCGCGTCGGTACCAAGGTCGTCGTGCGCGA
CTGA

Upstream 100 bases:

>100_bases
CCGATGCGCGCAGGGTTCTCGCGCGGGCCCGGGCCATGTCTGCCGAGGTCTGCAAAGGTCCGCGAGAACCCGCGCCGCGA
CGAACGGAGGACGGAAGACG

Downstream 100 bases:

>100_bases
TCGGGCGGGCGGCGGCGTCGGCCGCCGCTCCGCCGGCCGCCCCGCGGCCGGTCGCTCGGCCTCAGGCGGCGAGCTGCCCG
ACCGCGTCGCGCGCCGAGGC

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSRRIALLGLAGLLLGSAPAAAANPLDRGPIADFLNIFRSQAIPRETVAWTGKEKPGTIVVSTRQRRLYYVLGGGAAVRY
GVGVGRQGFSWSGTKTVTMKKEWPDWRPPQQMLARRPDLPRYMAGGQDNPLGARALYLGSSLYRIHGSNEPETMGAAVSS
GCIRMTNKDVVDLYDRVRVGTKVVVRD

Sequences:

>Translated_187_residues
MSRRIALLGLAGLLLGSAPAAAANPLDRGPIADFLNIFRSQAIPRETVAWTGKEKPGTIVVSTRQRRLYYVLGGGAAVRY
GVGVGRQGFSWSGTKTVTMKKEWPDWRPPQQMLARRPDLPRYMAGGQDNPLGARALYLGSSLYRIHGSNEPETMGAAVSS
GCIRMTNKDVVDLYDRVRVGTKVVVRD
>Mature_186_residues
SRRIALLGLAGLLLGSAPAAAANPLDRGPIADFLNIFRSQAIPRETVAWTGKEKPGTIVVSTRQRRLYYVLGGGAAVRYG
VGVGRQGFSWSGTKTVTMKKEWPDWRPPQQMLARRPDLPRYMAGGQDNPLGARALYLGSSLYRIHGSNEPETMGAAVSSG
CIRMTNKDVVDLYDRVRVGTKVVVRD

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=176, Percent_Identity=36.9318181818182, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1787040, Length=139, Percent_Identity=36.6906474820144, Blast_Score=83, Evalue=9e-18,
Organism=Escherichia coli, GI1787968, Length=135, Percent_Identity=40.7407407407407, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1787356, Length=137, Percent_Identity=35.036496350365, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 20387; Mature: 20256

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRIALLGLAGLLLGSAPAAAANPLDRGPIADFLNIFRSQAIPRETVAWTGKEKPGTIV
CCCEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHEEECCCCCCCEEE
VSTRQRRLYYVLGGGAAVRYGVGVGRQGFSWSGTKTVTMKKEWPDWRPPQQMLARRPDLP
EEECCEEEEEEEECCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCC
RYMAGGQDNPLGARALYLGSSLYRIHGSNEPETMGAAVSSGCIRMTNKDVVDLYDRVRVG
HHHCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHCCEEEECCCHHHHHHHHHHCC
TKVVVRD
CEEEEEC
>Mature Secondary Structure 
SRRIALLGLAGLLLGSAPAAAANPLDRGPIADFLNIFRSQAIPRETVAWTGKEKPGTIV
CCEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHEEECCCCCCCEEE
VSTRQRRLYYVLGGGAAVRYGVGVGRQGFSWSGTKTVTMKKEWPDWRPPQQMLARRPDLP
EEECCEEEEEEEECCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCC
RYMAGGQDNPLGARALYLGSSLYRIHGSNEPETMGAAVSSGCIRMTNKDVVDLYDRVRVG
HHHCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHCCEEEECCCHHHHHHHHHHCC
TKVVVRD
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]