| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yceJ [H]
Identifier: 170750790
GI number: 170750790
Start: 4667387
End: 4667992
Strand: Direct
Name: yceJ [H]
Synonym: Mrad2831_4401
Alternate gene names: 170750790
Gene position: 4667387-4667992 (Clockwise)
Preceding gene: 170750789
Following gene: 170750791
Centisome position: 76.79
GC content: 74.42
Gene sequence:
>606_bases ATGGCGAACGGGGTCTCCGCGCGGCGGTACTCCGCCGTGGCGATCCTGCTGCACTGGGCGAGCGCGCTGGGCGTGCTCGT CCTGATCGGTCTGGGCCTGACCATGACCCATGCGGGGTTGGCGCCGCTGCGCCAGTTCCAGCTCTACCAGTGGCACAAGT CGGTCGGGATCACCGTGCTGGCGCTGACCGCCCTGCGCGTCCTCTGGCGCCTGACCCACCGGCCGCCGCCGCACCCGGCC GGGATGCCGGCTCGGGAGCGCCGGGCCGCCGCGGCGGCCCATCACCTCCTGTACCTGCTCCTCGTCGGGCTGCCCCTGAC CGGCTGGGCCGTGGTGTCGCTGTCGCCGTTCAACATCCCGACGGTGCTCTACGGGATCGTGCCCTGGCCGCACCTGCCGC TGGCGGGCCTCGCCCCCGACCCCGCCGCCGCCGAGGGCGTCCTGAAGCGGGTCCACGCCCTGGGGGCGTGGTTCCTGGCG GCTCTGCTCGCAATCCACGTGGCGGCGGCCCTGCGCCACCACCTCCTCCTGCGCGACGACGTGCTGCGCCGCATGCTGCC GGGGCGCAGCACGTCGATCACCCCGACCGTGGAGCCGACCCGATGA
Upstream 100 bases:
>100_bases GAGTTCGGGGTGAAGACCTACGTGCCGCTGATCGGCGACGAGCTGCACCTCACGATCGCGGGCGCCTTCGAGAAGCAGGA CTGACCTGGGAGGATCCGCC
Downstream 100 bases:
>100_bases ACGCGCGTCACCTCTGCCTGCTGGCAGCTCTCCAGGCCGCCACCCTGCCGGCGGCGGCCGCCGAGTGGGCGGTCGATCCG GGCAAGAGCGCCATCCGGTT
Product: cytochrome B561
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MANGVSARRYSAVAILLHWASALGVLVLIGLGLTMTHAGLAPLRQFQLYQWHKSVGITVLALTALRVLWRLTHRPPPHPA GMPARERRAAAAAHHLLYLLLVGLPLTGWAVVSLSPFNIPTVLYGIVPWPHLPLAGLAPDPAAAEGVLKRVHALGAWFLA ALLAIHVAAALRHHLLLRDDVLRRMLPGRSTSITPTVEPTR
Sequences:
>Translated_201_residues MANGVSARRYSAVAILLHWASALGVLVLIGLGLTMTHAGLAPLRQFQLYQWHKSVGITVLALTALRVLWRLTHRPPPHPA GMPARERRAAAAAHHLLYLLLVGLPLTGWAVVSLSPFNIPTVLYGIVPWPHLPLAGLAPDPAAAEGVLKRVHALGAWFLA ALLAIHVAAALRHHLLLRDDVLRRMLPGRSTSITPTVEPTR >Mature_200_residues ANGVSARRYSAVAILLHWASALGVLVLIGLGLTMTHAGLAPLRQFQLYQWHKSVGITVLALTALRVLWRLTHRPPPHPAG MPARERRAAAAAHHLLYLLLVGLPLTGWAVVSLSPFNIPTVLYGIVPWPHLPLAGLAPDPAAAEGVLKRVHALGAWFLAA LLAIHVAAALRHHLLLRDDVLRRMLPGRSTSITPTVEPTR
Specific function: Unknown
COG id: COG3038
COG function: function code C; Cytochrome B561
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome b561 family [H]
Homologues:
Organism=Escherichia coli, GI1787296, Length=186, Percent_Identity=34.4086021505376, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005797 - InterPro: IPR016174 [H]
Pfam domain/function: PF00033 Cytochrom_B_N [H]
EC number: NA
Molecular weight: Translated: 21740; Mature: 21609
Theoretical pI: Translated: 12.17; Mature: 12.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANGVSARRYSAVAILLHWASALGVLVLIGLGLTMTHAGLAPLRQFQLYQWHKSVGITVL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALTALRVLWRLTHRPPPHPAGMPARERRAAAAAHHLLYLLLVGLPLTGWAVVSLSPFNIP HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHH TVLYGIVPWPHLPLAGLAPDPAAAEGVLKRVHALGAWFLAALLAIHVAAALRHHLLLRDD HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLRRMLPGRSTSITPTVEPTR HHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure ANGVSARRYSAVAILLHWASALGVLVLIGLGLTMTHAGLAPLRQFQLYQWHKSVGITVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALTALRVLWRLTHRPPPHPAGMPARERRAAAAAHHLLYLLLVGLPLTGWAVVSLSPFNIP HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHH TVLYGIVPWPHLPLAGLAPDPAAAEGVLKRVHALGAWFLAALLAIHVAAALRHHLLLRDD HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLRRMLPGRSTSITPTVEPTR HHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]