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The map label for this gene is yliD [C]

Identifier: 170750757

GI number: 170750757

Start: 4632727

End: 4633701

Strand: Direct

Name: yliD [C]

Synonym: Mrad2831_4368

Alternate gene names: 170750757

Gene position: 4632727-4633701 (Clockwise)

Preceding gene: 170750756

Following gene: 170750758

Centisome position: 76.22

GC content: 71.49

Gene sequence:

>975_bases
TTGACCGCGACCGTCGCGCCCTTCCCCAGCAGCGCCCCGCAGGCGGGCAATCCGCCCGACGGGGCCGTCCCCAAGGCACC
GCCGCCGCCGGGCCTCGCCGTCGCGGCGCCGCTGCCGGACGTCATCCCGGCCCGCAAGCGCCGGGGCAAGGTCTGGACCT
ACGTGCGCCGCAACCCGACCATCGTGGTCGGCGGCGTGCTGCTGCTCATCGTCTTCCTGATGGCGGTGCTCGCGCCTTAC
CTCGGCACCGTCGACCCGACCGCCCTGGCGCCCGCCAAGCGCACCCGGGCACCGTCGGCGCAGTACTGGTTCGGCACCGA
CATGCTCGGCCGCGACGTCTACTCGCGGGTGGTCTACGGCGCCCGGGTCTCGCTGCTGGTCGGCTTCTCGGTGGCGTTCC
TCGCGTCGATCGCCGGGCTGGCGGTCGGCCTCGTCTCCGGCATGGTGCGCTGGCTCGACGGGATCGTCATGCGGGTCGTC
GACGGCATGATGTCGATCCCGCCGATCCTGCTCGCGGTCGCGCTGATGGCGCTCACCCGCGGCTCGGTCCAGAACGTGAT
CATCGCGATCACCATCGCGGAGATCCCGCGCGTCGCCCGCCTCGTGCGCGGCGTGGTGCTGTCGCTGCGCGAGCAGCCCT
ACGTCGAGGCGGCGGTGACCACGGGCACCCGGATGCCGGCGATCATCTGGCGCCACATCCTGCCCAACACGCTGGCGCCC
ATGACCGTGCAGGCGACCTATATCTGCGCCTCCGCGATGATCACCGAGGCGATCCTGTCGTTCATCGGCGCGGGCGTGCC
GCCCTCGACGCCGTCCTGGGGCAACATCATGGCCGAGGGCCGGGCCCTCTGGCAGGTGAAGTTCTACATCATCCTGTTCC
CGGCGATCTTCCTCTCGATGACGGTGCTCGCCGTGAACCTCGTCGGCGACGGCCTGCGCGACGCCCTCGACCCCCGCATG
GCGAAAGACGTGTGA

Upstream 100 bases:

>100_bases
CGGTCATCCAGGGCGTCGTGCTGCTGTTCAGCTTCGTCTACGTGCTCGTGAACCTCGCCATCGACCTCTTCTACACCGTG
CTCGACCCGAGGATCCGCTA

Downstream 100 bases:

>100_bases
TGAGCACAGGGATGAGCACAGGCGTGAGCGGCACCCCCCTCCTGTCGATCGAGAGCCTGCAGGTCCATTTCCGCACCCCC
GACGGGGTGAACCGGGCGGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MTATVAPFPSSAPQAGNPPDGAVPKAPPPPGLAVAAPLPDVIPARKRRGKVWTYVRRNPTIVVGGVLLLIVFLMAVLAPY
LGTVDPTALAPAKRTRAPSAQYWFGTDMLGRDVYSRVVYGARVSLLVGFSVAFLASIAGLAVGLVSGMVRWLDGIVMRVV
DGMMSIPPILLAVALMALTRGSVQNVIIAITIAEIPRVARLVRGVVLSLREQPYVEAAVTTGTRMPAIIWRHILPNTLAP
MTVQATYICASAMITEAILSFIGAGVPPSTPSWGNIMAEGRALWQVKFYIILFPAIFLSMTVLAVNLVGDGLRDALDPRM
AKDV

Sequences:

>Translated_324_residues
MTATVAPFPSSAPQAGNPPDGAVPKAPPPPGLAVAAPLPDVIPARKRRGKVWTYVRRNPTIVVGGVLLLIVFLMAVLAPY
LGTVDPTALAPAKRTRAPSAQYWFGTDMLGRDVYSRVVYGARVSLLVGFSVAFLASIAGLAVGLVSGMVRWLDGIVMRVV
DGMMSIPPILLAVALMALTRGSVQNVIIAITIAEIPRVARLVRGVVLSLREQPYVEAAVTTGTRMPAIIWRHILPNTLAP
MTVQATYICASAMITEAILSFIGAGVPPSTPSWGNIMAEGRALWQVKFYIILFPAIFLSMTVLAVNLVGDGLRDALDPRM
AKDV
>Mature_323_residues
TATVAPFPSSAPQAGNPPDGAVPKAPPPPGLAVAAPLPDVIPARKRRGKVWTYVRRNPTIVVGGVLLLIVFLMAVLAPYL
GTVDPTALAPAKRTRAPSAQYWFGTDMLGRDVYSRVVYGARVSLLVGFSVAFLASIAGLAVGLVSGMVRWLDGIVMRVVD
GMMSIPPILLAVALMALTRGSVQNVIIAITIAEIPRVARLVRGVVLSLREQPYVEAAVTTGTRMPAIIWRHILPNTLAPM
TVQATYICASAMITEAILSFIGAGVPPSTPSWGNIMAEGRALWQVKFYIILFPAIFLSMTVLAVNLVGDGLRDALDPRMA
KDV

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=292, Percent_Identity=37.6712328767123, Blast_Score=198, Evalue=4e-52,
Organism=Escherichia coli, GI1787760, Length=270, Percent_Identity=39.2592592592593, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1789964, Length=280, Percent_Identity=39.2857142857143, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1787498, Length=277, Percent_Identity=33.9350180505415, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=34.156378600823, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1787549, Length=229, Percent_Identity=31.4410480349345, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1788505, Length=228, Percent_Identity=29.3859649122807, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34426; Mature: 34294

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATVAPFPSSAPQAGNPPDGAVPKAPPPPGLAVAAPLPDVIPARKRRGKVWTYVRRNPT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCEEEEEECCCC
IVVGGVLLLIVFLMAVLAPYLGTVDPTALAPAKRTRAPSAQYWFGTDMLGRDVYSRVVYG
EEHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHCCCCCCCEECCHHHHHHHHHHHHHHH
ARVSLLVGFSVAFLASIAGLAVGLVSGMVRWLDGIVMRVVDGMMSIPPILLAVALMALTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GSVQNVIIAITIAEIPRVARLVRGVVLSLREQPYVEAAVTTGTRMPAIIWRHILPNTLAP
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCC
MTVQATYICASAMITEAILSFIGAGVPPSTPSWGNIMAEGRALWQVKFYIILFPAIFLSM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
TVLAVNLVGDGLRDALDPRMAKDV
HHHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure 
TATVAPFPSSAPQAGNPPDGAVPKAPPPPGLAVAAPLPDVIPARKRRGKVWTYVRRNPT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCEEEEEECCCC
IVVGGVLLLIVFLMAVLAPYLGTVDPTALAPAKRTRAPSAQYWFGTDMLGRDVYSRVVYG
EEHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHCCCCCCCEECCHHHHHHHHHHHHHHH
ARVSLLVGFSVAFLASIAGLAVGLVSGMVRWLDGIVMRVVDGMMSIPPILLAVALMALTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GSVQNVIIAITIAEIPRVARLVRGVVLSLREQPYVEAAVTTGTRMPAIIWRHILPNTLAP
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCC
MTVQATYICASAMITEAILSFIGAGVPPSTPSWGNIMAEGRALWQVKFYIILFPAIFLSM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
TVLAVNLVGDGLRDALDPRMAKDV
HHHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]