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The map label for this gene is yliC [C]

Identifier: 170750756

GI number: 170750756

Start: 4631789

End: 4632730

Strand: Direct

Name: yliC [C]

Synonym: Mrad2831_4367

Alternate gene names: 170750756

Gene position: 4631789-4632730 (Clockwise)

Preceding gene: 170750755

Following gene: 170750757

Centisome position: 76.21

GC content: 68.68

Gene sequence:

>942_bases
ATGCTCGGCTATATCGGCAGGCGCATCCTCGCCACCATCCCGGTCATGGCGGTGGTCGGGCTGTTCGTCTTCAGCCTCCT
CTACTTCGCCCCCGGCGACCCGGCCGCGATCATCGCGGGCGACCAGGCGACGCCCGACGACGTCGCCCGCATCCGCGCCA
CGCTCGGCCTCGACCGGCCCTTCCTGGTGCGGTTCTGGGAATGGTCGTGGCAGATCCTCCACGGCGATCTCGGCACCTCG
ATCTTCACCAACCTGCCGGTCACCACCATGATCGGCCAGCGGGTGGAGCCCACCGTCTCGCTGATGCTCGTCACCCTGGT
CTTCGCGATCCTGGTGGCGGTGCCGCTCGGCGTCGTCGCCGCCTGGAAGGCCGGCAGCCTGATCGACCGCCTCGTGATGG
GGCTCGCCGTGACGGGCTTCTCGGTGCCGGTCTTCGTGGTCGGCTACGTGCTGGCCTACGTCTTCGCCCTCGAGCTCGGC
TGGCTGCCGGTCCAGGGCTACACGCCGATCGAGCAGGGTCTGTGGCCCTGGCTGTCCAACCTGATCCTGCCGGCGGTGAC
GCTGGGCCTCGTCTACATCGCGCTGATCGCCCGGGTGACCCGCGCGACCATGCTCGACGTGCTCCAGCAGGATTACGTGC
GCACCGCCCGGGCCAAGGGGCTGGCGCAGGGGCCGGTCCTGTTCGTCCACGCCCTCAAGAACGCCGCGGTGCCGATCGTC
ACCGTGATCGGCATCGGCATCGCGTTGCTGATCGGAGGCGCGGTGGTGACCGAGACGGTCTTCGCCATCCCCGGCCTCGG
GCGCCTCACCGTCGACGCGATCCTGCGGCGCGACTACCCGGTCATCCAGGGCGTCGTGCTGCTGTTCAGCTTCGTCTACG
TGCTCGTGAACCTCGCCATCGACCTCTTCTACACCGTGCTCGACCCGAGGATCCGCTATTGA

Upstream 100 bases:

>100_bases
CGTCGGCGCCCGACCCGGACGCGTGAATGTCGGCCCCCGCGATGAGGGCAGGGGCGGCGCTACCCGCCGCGCCTGCCCGC
CCGCACGATAGCGAGGACCC

Downstream 100 bases:

>100_bases
CCGCGACCGTCGCGCCCTTCCCCAGCAGCGCCCCGCAGGCGGGCAATCCGCCCGACGGGGCCGTCCCCAAGGCACCGCCG
CCGCCGGGCCTCGCCGTCGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MLGYIGRRILATIPVMAVVGLFVFSLLYFAPGDPAAIIAGDQATPDDVARIRATLGLDRPFLVRFWEWSWQILHGDLGTS
IFTNLPVTTMIGQRVEPTVSLMLVTLVFAILVAVPLGVVAAWKAGSLIDRLVMGLAVTGFSVPVFVVGYVLAYVFALELG
WLPVQGYTPIEQGLWPWLSNLILPAVTLGLVYIALIARVTRATMLDVLQQDYVRTARAKGLAQGPVLFVHALKNAAVPIV
TVIGIGIALLIGGAVVTETVFAIPGLGRLTVDAILRRDYPVIQGVVLLFSFVYVLVNLAIDLFYTVLDPRIRY

Sequences:

>Translated_313_residues
MLGYIGRRILATIPVMAVVGLFVFSLLYFAPGDPAAIIAGDQATPDDVARIRATLGLDRPFLVRFWEWSWQILHGDLGTS
IFTNLPVTTMIGQRVEPTVSLMLVTLVFAILVAVPLGVVAAWKAGSLIDRLVMGLAVTGFSVPVFVVGYVLAYVFALELG
WLPVQGYTPIEQGLWPWLSNLILPAVTLGLVYIALIARVTRATMLDVLQQDYVRTARAKGLAQGPVLFVHALKNAAVPIV
TVIGIGIALLIGGAVVTETVFAIPGLGRLTVDAILRRDYPVIQGVVLLFSFVYVLVNLAIDLFYTVLDPRIRY
>Mature_313_residues
MLGYIGRRILATIPVMAVVGLFVFSLLYFAPGDPAAIIAGDQATPDDVARIRATLGLDRPFLVRFWEWSWQILHGDLGTS
IFTNLPVTTMIGQRVEPTVSLMLVTLVFAILVAVPLGVVAAWKAGSLIDRLVMGLAVTGFSVPVFVVGYVLAYVFALELG
WLPVQGYTPIEQGLWPWLSNLILPAVTLGLVYIALIARVTRATMLDVLQQDYVRTARAKGLAQGPVLFVHALKNAAVPIV
TVIGIGIALLIGGAVVTETVFAIPGLGRLTVDAILRRDYPVIQGVVLLFSFVYVLVNLAIDLFYTVLDPRIRY

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=313, Percent_Identity=42.1725239616613, Blast_Score=258, Evalue=5e-70,
Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=40.9495548961424, Blast_Score=254, Evalue=4e-69,
Organism=Escherichia coli, GI1789888, Length=315, Percent_Identity=39.3650793650794, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1787497, Length=315, Percent_Identity=36.1904761904762, Blast_Score=197, Evalue=9e-52,
Organism=Escherichia coli, GI1787761, Length=326, Percent_Identity=38.3435582822086, Blast_Score=171, Evalue=5e-44,
Organism=Escherichia coli, GI1788504, Length=285, Percent_Identity=28.4210526315789, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1787550, Length=261, Percent_Identity=29.1187739463602, Blast_Score=127, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33954; Mature: 33954

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGYIGRRILATIPVMAVVGLFVFSLLYFAPGDPAAIIAGDQATPDDVARIRATLGLDRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCH
FLVRFWEWSWQILHGDLGTSIFTNLPVTTMIGQRVEPTVSLMLVTLVFAILVAVPLGVVA
HHHHHHHHHHHHEECHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AWKAGSLIDRLVMGLAVTGFSVPVFVVGYVLAYVFALELGWLPVQGYTPIEQGLWPWLSN
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LILPAVTLGLVYIALIARVTRATMLDVLQQDYVRTARAKGLAQGPVLFVHALKNAAVPIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHH
TVIGIGIALLIGGAVVTETVFAIPGLGRLTVDAILRRDYPVIQGVVLLFSFVYVLVNLAI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DLFYTVLDPRIRY
HHHHHHHCCCCCC
>Mature Secondary Structure
MLGYIGRRILATIPVMAVVGLFVFSLLYFAPGDPAAIIAGDQATPDDVARIRATLGLDRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCH
FLVRFWEWSWQILHGDLGTSIFTNLPVTTMIGQRVEPTVSLMLVTLVFAILVAVPLGVVA
HHHHHHHHHHHHEECHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AWKAGSLIDRLVMGLAVTGFSVPVFVVGYVLAYVFALELGWLPVQGYTPIEQGLWPWLSN
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LILPAVTLGLVYIALIARVTRATMLDVLQQDYVRTARAKGLAQGPVLFVHALKNAAVPIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHH
TVIGIGIALLIGGAVVTETVFAIPGLGRLTVDAILRRDYPVIQGVVLLFSFVYVLVNLAI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DLFYTVLDPRIRY
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424; 8796346 [H]